ppp1r1c cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	ppp1r1c
Entrez Gene ID	436811
Full Name	protein phosphatase 1, regulatory (inhibitor) subunit 1C
Synonyms	wu:fk97a08,zgc:92796
General protein information	Preferred Names protein phosphatase 1, regulatory (inhibitor) subunit 1C Names protein phosphatase 1 regulatory subunit 1C fk97a08
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
XM_005167887.3	XP_005167944.1	protein phosphatase 1 regulatory subunit 1C isoform X1
NM_001002538.2	NP_001002538.1	protein phosphatase 1 regulatory subunit 1C
XM_005167887.4	XP_005167944.1	protein phosphatase 1 regulatory subunit 1C isoform X1

Pathways from BioSystems

Homologies

Danio rerio (zebrafish)	ppp1r1c	NP_001002538.1
Bos taurus (cattle)	PPP1R1C	NP_001178281.1
Mus musculus (house mouse)	Ppp1r1c	NP_766008.2
Rattus norvegicus (Norway rat)	Ppp1r1c	NP_001102670.1
Xenopus tropicalis (tropical clawed frog)	ppp1r1c	NP_001165134.1
	PPP1R1C	XP_001101383.1
Gallus gallus (chicken)	PPP1R1C	XP_004942745.1
Homo sapiens (human)	PPP1R1C	NP_001248353.1
Pan troglodytes (chimpanzee)	PPP1R1C	XP_003309401.1
Canis lupus familiaris (dog)	PPP1R1C	XP_005640435.1

Gene Ontology
Bibliography

Related articles in PubMed

Transcriptomic, proteomic, and metabolomic landscape of positional memory in the caudal fin of zebrafish.
Rabinowitz JS, Robitaille AM, Wang Y, Ray CA, Thummel R, Gu H, Djukovic D, Raftery D, Berndt JD, Moon RT
Proceedings of the National Academy of Sciences of the United States of America114(5)E717-E726(2017 Jan)

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

Early exposure to caffeine affects gene expression of adenosine receptors, DARPP-32 and BDNF without affecting sensibility and morphology of developing zebrafish (Danio rerio).
Capiotti KM, Menezes FP, Nazario LR, Pohlmann JB, de Oliveira GM, Fazenda L, Bogo MR, Bonan CD, Da Silva RS
Neurotoxicology and teratology33(6)680-5(2011 Nov-Dec)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following ppp1r1c gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the ppp1r1c cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
ODa32710	NM_001002538.2 Latest version!	Danio rerio protein phosphatase 1, regulatory (inhibitor) subunit 1C (ppp1r1c), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$104.30 $149.00
ODa15474	XM_005167887.4 Latest version!	Danio rerio protein phosphatase 1, regulatory (inhibitor) subunit 1C (ppp1r1c), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$104.30 $149.00
View Old Accession Versions >>
ODa15474	XM_005167887.3	Danio rerio protein phosphatase 1, regulatory (inhibitor) subunit 1C (ppp1r1c), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$104.30 $149.00
Hide Old Accession Versions >>

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

ppp1r1c ( NM_001002538.2 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001002538.1 Danio rerio protein phosphatase 1, regulatory (inhibitor) subunit 1C (ppp1r1c), mRNA.

Price & Availability↑

CloneID	ODa32710
Clone ID Related Accession (Same CDS sequence)	NM_001002538.2
Accession Version	NM_001002538.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 516bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-11-23
Organism	Danio rerio(zebrafish)
Product	protein phosphatase 1 regulatory subunit 1C
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC076270.1. On Aug 30, 2012 this sequence version replaced NM_001002538.1. ##Evidence-Data-START## Transcript exon combination :: BC076270.1, CK361396.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END##

ATGGAGCCCA ACAGCCCCAA GAAGATTCAG TTTGCCGTTC CACTTTTCCA GAGCCAGTTG 
GATCCCCAGG CGGCCGAGCA TATTCGCAAG CGCAGACCTA CTCCAGCCAC ACTGGTCATT 
TACAATGAGC CCAGTGCCTC AGGAGATGAC AAGCAGTCTA CAGGCCATCA AACAGAGGCC 
CAGAACGCGC AGCTTTCTCC AGCCCAGAGG AAACAGAGCG TCTACACACC GCCCACCATG 
AGAGAGCTGC AGCTGGTGGT GGAGCAGCAC TTTCAGAGGC AGGAGCAGCA GGAGGCGGGG 
CTTTCTGACA GCCCTGACAC ACCCAGTCCA ATCACAACAC AGCATTTTGC CACCGGAGCT 
CAGTGGGCCA ATCACAACAG CTCAGAGCCC AATGGCAATC AGTCTTATGT CAGTACTGAG 
GGGCAGCCAG GCAGCAGTGG GGCCGGGGGA AACACAGCAG AAAGCTCAGG AAGCGAGCAG 
AAAAACTTGA GCAGTCCTTC ATCTGTCTCT CGATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001002538.1
CDS	161..676
Translation	MEPNSPKKIQFAVPLFQSQLDPQAAEHIRKRRPTPATLVIYNEPSASGDDKQSTGHQTEAQNAQLSPAQRKQSVYTPPTMRELQLVVEQHFQRQEQQEAGLSDSPDTPSPITTQHFATGAQWANHNSSEPNGNQSYVSTEGQPGSSGAGGNTAESSGSEQKNLSSPSSVSR

Target ORF information:

RefSeq Version	NM_001002538.2
Organism	Danio rerio(zebrafish)
Definition	Danio rerio protein phosphatase 1, regulatory (inhibitor) subunit 1C (ppp1r1c), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001002538.2

ORF Insert Sequence:

ATGGAGCCCA ACAGCCCCAA GAAGATTCAG TTTGCCGTTC CACTTTTCCA GAGCCAGTTG 
GATCCCCAGG CGGCCGAGCA TATTCGCAAG CGCAGACCTA CTCCAGCCAC ACTGGTCATT 
TACAATGAGC CCAGTGCCTC AGGAGATGAC AAGCAGTCTA CAGGCCATCA AACAGAGGCC 
CAGAACGCGC AGCTTTCTCC AGCCCAGAGG AAACAGAGCG TCTACACACC GCCCACCATG 
AGAGAGCTGC AGCTGGTGGT GGAGCAGCAC TTTCAGAGGC AGGAGCAGCA GGAGGCGGGG 
CTTTCTGACA GCCCTGACAC ACCCAGTCCA ATCACAACAC AGCATTTTGC CACCGGAGCT 
CAGTGGGCCA ATCACAACAG CTCAGAGCCC AATGGCAATC AGTCTTATGT CAGTACTGAG 
GGGCAGCCAG GCAGCAGTGG GGCCGGGGGA AACACAGCAG AAAGCTCAGG AAGCGAGCAG 
AAAAACTTGA GCAGTCCTTC ATCTGTCTCT CGATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

ppp1r1c ( XM_005167887.3 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_005167944.1 Danio rerio protein phosphatase 1, regulatory (inhibitor) subunit 1C (ppp1r1c), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ODa15474
Clone ID Related Accession (Same CDS sequence)	XM_005167887.3 , XM_005167887.4
Accession Version	XM_005167887.3	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 498bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-06-23
Organism	Danio rerio(Zebrafish)
Product	protein phosphatase 1 regulatory subunit 1C isoform X1
Comment	MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007120.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_005167887.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGAGCCCA ACAGCCCCAA GAAGATTCAG TTTGCCGTTC CACTTTTCCA GAGCCAGTTG 
GATCCCCAGG CGGCCGAGCA TATTCGCAAG CGCAGACCTA CTCCAGCCAC ACTGGTCATT 
TACAATGAGC CCAGTGCCTC AGGAGATGAC AAGCAGTCTA CAGGCCATCA AACAGAGGCC 
CAGAACGCGC AGCTTTCTCC AGCCCAGAGG AAACAGAGCG TCTACACACC GCCCACCATG 
AGAGGTAAAG AGCACTACAG CGACAGCCAA CAGGAGGACA GAGAGAGTCA TCAACCTACT 
AGACTCTCTC AGAAACACCT GGACACACTG TCAGAAGAAC CTGGTGATCT TTCACCTCGA 
CGCAAAGACA CACCGTACCT GCACCAGCCA CCATTCATTC CCGGCGTAAA GATGCTGAAA 
AACCAGACAG ACCCTTCGTC ACTTCTCCAG GAGGAAGAGG AGAGCAGCGG TGAACTGAAA 
AACAGCCAGA CAGAGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_005167944.1
CDS	194..691
Translation	MEPNSPKKIQFAVPLFQSQLDPQAAEHIRKRRPTPATLVIYNEPSASGDDKQSTGHQTEAQNAQLSPAQRKQSVYTPPTMRGKEHYSDSQQEDRESHQPTRLSQKHLDTLSEEPGDLSPRRKDTPYLHQPPFIPGVKMLKNQTDPSSLLQEEEESSGELKNSQTE

Target ORF information:

RefSeq Version	XM_005167887.3
Organism	Danio rerio(Zebrafish)
Definition	Danio rerio protein phosphatase 1, regulatory (inhibitor) subunit 1C (ppp1r1c), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_005167887.3

ORF Insert Sequence:

ATGGAGCCCA ACAGCCCCAA GAAGATTCAG TTTGCCGTTC CACTTTTCCA GAGCCAGTTG 
GATCCCCAGG CGGCCGAGCA TATTCGCAAG CGCAGACCTA CTCCAGCCAC ACTGGTCATT 
TACAATGAGC CCAGTGCCTC AGGAGATGAC AAGCAGTCTA CAGGCCATCA AACAGAGGCC 
CAGAACGCGC AGCTTTCTCC AGCCCAGAGG AAACAGAGCG TCTACACACC GCCCACCATG 
AGAGGTAAAG AGCACTACAG CGACAGCCAA CAGGAGGACA GAGAGAGTCA TCAACCTACT 
AGACTCTCTC AGAAACACCT GGACACACTG TCAGAAGAAC CTGGTGATCT TTCACCTCGA 
CGCAAAGACA CACCGTACCT GCACCAGCCA CCATTCATTC CCGGCGTAAA GATGCTGAAA 
AACCAGACAG ACCCTTCGTC ACTTCTCCAG GAGGAAGAGG AGAGCAGCGG TGAACTGAAA 
AACAGCCAGA CAGAGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

ppp1r1c ( XM_005167887.4 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_005167944.1 Danio rerio protein phosphatase 1, regulatory (inhibitor) subunit 1C (ppp1r1c), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ODa15474
Clone ID Related Accession (Same CDS sequence)	XM_005167887.3 , XM_005167887.4
Accession Version	XM_005167887.4 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 498bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-06-14
Organism	Danio rerio(zebrafish)
Product	protein phosphatase 1 regulatory subunit 1C isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007120.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_005167887.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGAGCCCA ACAGCCCCAA GAAGATTCAG TTTGCCGTTC CACTTTTCCA GAGCCAGTTG 
GATCCCCAGG CGGCCGAGCA TATTCGCAAG CGCAGACCTA CTCCAGCCAC ACTGGTCATT 
TACAATGAGC CCAGTGCCTC AGGAGATGAC AAGCAGTCTA CAGGCCATCA AACAGAGGCC 
CAGAACGCGC AGCTTTCTCC AGCCCAGAGG AAACAGAGCG TCTACACACC GCCCACCATG 
AGAGGTAAAG AGCACTACAG CGACAGCCAA CAGGAGGACA GAGAGAGTCA TCAACCTACT 
AGACTCTCTC AGAAACACCT GGACACACTG TCAGAAGAAC CTGGTGATCT TTCACCTCGA 
CGCAAAGACA CACCGTACCT GCACCAGCCA CCATTCATTC CCGGCGTAAA GATGCTGAAA 
AACCAGACAG ACCCTTCGTC ACTTCTCCAG GAGGAAGAGG AGAGCAGCGG TGAACTGAAA 
AACAGCCAGA CAGAGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_005167944.1
CDS	338..835
Translation	MEPNSPKKIQFAVPLFQSQLDPQAAEHIRKRRPTPATLVIYNEPSASGDDKQSTGHQTEAQNAQLSPAQRKQSVYTPPTMRGKEHYSDSQQEDRESHQPTRLSQKHLDTLSEEPGDLSPRRKDTPYLHQPPFIPGVKMLKNQTDPSSLLQEEEESSGELKNSQTE

Target ORF information:

RefSeq Version	XM_005167887.4
Organism	Danio rerio(zebrafish)
Definition	Danio rerio protein phosphatase 1, regulatory (inhibitor) subunit 1C (ppp1r1c), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_005167887.4

ORF Insert Sequence:

ATGGAGCCCA ACAGCCCCAA GAAGATTCAG TTTGCCGTTC CACTTTTCCA GAGCCAGTTG 
GATCCCCAGG CGGCCGAGCA TATTCGCAAG CGCAGACCTA CTCCAGCCAC ACTGGTCATT 
TACAATGAGC CCAGTGCCTC AGGAGATGAC AAGCAGTCTA CAGGCCATCA AACAGAGGCC 
CAGAACGCGC AGCTTTCTCC AGCCCAGAGG AAACAGAGCG TCTACACACC GCCCACCATG 
AGAGGTAAAG AGCACTACAG CGACAGCCAA CAGGAGGACA GAGAGAGTCA TCAACCTACT 
AGACTCTCTC AGAAACACCT GGACACACTG TCAGAAGAAC CTGGTGATCT TTCACCTCGA 
CGCAAAGACA CACCGTACCT GCACCAGCCA CCATTCATTC CCGGCGTAAA GATGCTGAAA 
AACCAGACAG ACCCTTCGTC ACTTCTCCAG GAGGAAGAGG AGAGCAGCGG TGAACTGAAA 
AACAGCCAGA CAGAGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Transcriptomic, proteomic, and metabolomic landscape of positional memory in the caudal fin of zebrafish.
Proceedings of the National Academy of Sciences of the United States of America114(5)E717-E726(2017 Jan)
Rabinowitz JS,Robitaille AM,Wang Y,Ray CA,Thummel R,Gu H,Djukovic D,Raftery D,Berndt JD,Moon RT

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

Early exposure to caffeine affects gene expression of adenosine receptors, DARPP-32 and BDNF without affecting sensibility and morphology of developing zebrafish (Danio rerio).
Neurotoxicology and teratology33(6)680-5(2011 Nov-Dec)
Capiotti KM,Menezes FP,Nazario LR,Pohlmann JB,de Oliveira GM,Fazenda L,Bogo MR,Bonan CD,Da Silva RS

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ppp1r1c cDNA ORF clone, Danio rerio(zebrafish)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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