STXBP3 cDNA ORF clone, Danio rerio(Zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	STXBP3
Entrez Gene ID	406780
Full Name	syntaxin binding protein 3
Synonyms	wu:fb71h06,zgc:63761
General protein information	Preferred Names syntaxin binding protein 3 Names syntaxin-binding protein 3 fb71h06
Gene Type	protein-coding
Organism	Danio rerio(Zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_213471.1	NP_998636.1	syntaxin-binding protein 3
XM_009296575.3	XP_009294850.1	syntaxin-binding protein 3 isoform X1
XM_009296575.2	XP_009294850.1	syntaxin-binding protein 3 isoform X1

Pathways from BioSystems

Homologies

	STXBP3	XP_001087621.2
Rattus norvegicus (Norway rat)	Stxbp3	NP_446089.1
Pan troglodytes (chimpanzee)	STXBP3	XP_001145368.1
Canis lupus familiaris (dog)	STXBP3	XP_547249.2
Mus musculus (house mouse)	Stxbp3a	NP_035634.1
Danio rerio (zebrafish)	stxbp3	NP_998636.1
Xenopus tropicalis (tropical clawed frog)	stxbp3	NP_001015972.1
Homo sapiens (human)	STXBP3	NP_009200.2
Bos taurus (cattle)	STXBP3	NP_001076884.1
Gallus gallus (chicken)	STXBP3	NP_001073202.1

Gene Ontology
Bibliography

Related articles in PubMed

Evolution of complexity in the zebrafish synapse proteome.
Bay?s ?, Collins MO, Reig-Viader R, Gou G, Goulding D, Izquierdo A, Choudhary JS, Emes RD, Grant SG
Nature communications814613(2017 Mar)

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)

Rab32 and Rab38 genes in chordate pigmentation: an evolutionary perspective.
Coppola U, Annona G, D'Aniello S, Ristoratore F
BMC evolutionary biology1626(2016 Jan)

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

Identification of 315 genes essential for early zebrafish development.
Amsterdam A, Nissen RM, Sun Z, Swindell EC, Farrington S, Hopkins N
Proceedings of the National Academy of Sciences of the United States of America101(35)12792-7(2004 Aug)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following STXBP3 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the STXBP3 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
ODa33500	NM_213471.1 Latest version!	Danio rerio syntaxin binding protein 3 (stxbp3), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$342.30 $489.00
ODa40920	XM_009296575.3 Latest version!	Danio rerio syntaxin binding protein 3 (stxbp3), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$342.30 $489.00
View Old Accession Versions >>
ODa40920	XM_009296575.2	Danio rerio syntaxin binding protein 3 (stxbp3), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$342.30 $489.00
Hide Old Accession Versions >>

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***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

STXBP3 ( NM_213471.1 ) cDNA ORF clone, Danio rerio(Zebrafish) -> NP_998636.1 Danio rerio syntaxin binding protein 3 (stxbp3), mRNA.

Price & Availability↑

CloneID	ODa33500
Clone ID Related Accession (Same CDS sequence)	NM_213471.1
Accession Version	NM_213471.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1773bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-11-23
Organism	Danio rerio(zebrafish)
Product	syntaxin-binding protein 3
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC058874.1. ##Evidence-Data-START## Transcript exon combination :: BC058874.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END##

ATGGCAACTG GAGCAGACCA CGGCTTGAAA AAAATAGTAT GGCAAAGGAT CAGGGACACC 
ATCATTGCAG ACTGCAAAAA GTGGAACATC CTCATACTAG ACGATTTCAC CACACGCCTA 
CTGTCCTCGT GCTGCAAGAT GTCTGATCTC ATGTCCGAGG GCATCTCAGT TTTGGAGAAC 
CTGTTCAAAA ACAGAGAGCC GGTTCCAGAT ATGAAGGCCA TCTACTTCAT GGCTCCCACT 
GTTGAGTGTA TTGATGCATT TATTAATGAC TTCAAACCCA AGCCCAAATA CAAAGCTGCG 
TATGTCTTCT TCACGGACTA CTGTCCTGAT GAGCTCTTCG ACAAAATGAA GAAGAACTGC 
GCCAAGCACA TTAAAAAGTG TAAAGAGATC AACATCTCCT TTCTGCCACA GGAAGCACAA 
GTGTTCACCT GCGAGAACCC AGAGGCCTTT AAGAAGATCT ACAGTGGGTT CAGTCAGGAC 
AGAGAGAAGA CGCTGGATAA AATTGCAGAT CAGATTGTAA CTCTCTGTGC TACGCTGGAC 
GAGTATCCTG GAGTCCGATA CAAAAGAGAA TCGACTCCTG GATATGGAAA GATGTTGGCT 
GAACTTGTTG ATAATAAACT GGCCCGGCAT TATGAGTTGG ATGAAATTAC GACAAAAAAG 
GAAAAAACAC CGGCGCAGCT GCTGATTGTT GACCGTGCAA TGGACCCTGT TAGTCCCATT 
CTTCACGAGC TCACTTACCA AGCCATGGCT TATGACCTCA TACCTATAAA TAACAACATC 
TACGAGTATA AAATGAAGGA TGGCTCCAAG AAAGAAGCTT TACTAAACGA AGATGATGAA 
TTATGGGTCA AACTGCGGCA CAGGCACATT GCTGAGGTCA CTGAGCAAAT CCCCAAACTG 
GTGAAGGACA TCTCTGCCAG CAGAGACGAG AAACAACAGG GTGATGGGAA GATCACAATC 
GGAGCCCTTT CACAGCTCAT GAAGAAGATG CCAGCTTTCC GCAAGCAAGA GACACAGAAA 
ACCGTGCACC TACATTTAGC CGAGGATCTG ATGGGCCATT ACCAGAAGAA CGTGGAGAAA 
CTCTGCAAAG CGGAGCAGGA TCTGGCTGTC GGTGCAGACG CTGAGGGACA GAAGGTTAAA 
GACCCCATGC GGACGCTGCT TCCTGTGCTT TTACACCAGC ACGACACCAC CGACAAGATC 
CGCGCCGTCC TGCTCTACAT CTTCAGCCTC AATGGTACGA CAACGGAGAA TCTGAATAAA 
CTGATTCAGA ATGTGAAAAT CGAGGATAAG GACGGCTACA TCCAGAACTG GAACCAGCTG 
GGAGTCCCCA TCCTCTCCTC GTCAAACAGT TCTCGTAAAG TAGCTCGGAG AGACCGCTCG 
GAACAGGAGA CGTATAATGT CTCTCGCTGG ACACCCGTCA TTAAAGACAT AATGGAGGAC 
GCAGTGGAAA ATAAACTGGA TATCAAAGAC TGGCCGTTTC AGTCTGAATG TCCGTCTGCG 
TGGAACGGCT CTCGGGCTGT AAGTGCACGG CAGAAGCACA AGGGCAGCTC TCCAGGGGAC 
ATGAAGAACG GCTCGCGCCT CATCATCTTC GTTCTGGGTG GAGTCAGCTA CTCTGAGATG 
CGCTGCGCTT ATGAAGTCAC CAACACTAAT AAATCCTGTG AGGTCATCAT CGGCTCGACA 
CACATCCTCA CTCCTCGCAG TCTCCTGGAG GACATTTATA ACCTGGGGAA AAAACCCATG 
GACACTTTGA CCATCGAGGA GGGCAAAGTC TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_998636.1
CDS	11..1783
Translation	MATGADHGLKKIVWQRIRDTIIADCKKWNILILDDFTTRLLSSCCKMSDLMSEGISVLENLFKNREPVPDMKAIYFMAPTVECIDAFINDFKPKPKYKAAYVFFTDYCPDELFDKMKKNCAKHIKKCKEINISFLPQEAQVFTCENPEAFKKIYSGFSQDREKTLDKIADQIVTLCATLDEYPGVRYKRESTPGYGKMLAELVDNKLARHYELDEITTKKEKTPAQLLIVDRAMDPVSPILHELTYQAMAYDLIPINNNIYEYKMKDGSKKEALLNEDDELWVKLRHRHIAEVTEQIPKLVKDISASRDEKQQGDGKITIGALSQLMKKMPAFRKQETQKTVHLHLAEDLMGHYQKNVEKLCKAEQDLAVGADAEGQKVKDPMRTLLPVLLHQHDTTDKIRAVLLYIFSLNGTTTENLNKLIQNVKIEDKDGYIQNWNQLGVPILSSSNSSRKVARRDRSEQETYNVSRWTPVIKDIMEDAVENKLDIKDWPFQSECPSAWNGSRAVSARQKHKGSSPGDMKNGSRLIIFVLGGVSYSEMRCAYEVTNTNKSCEVIIGSTHILTPRSLLEDIYNLGKKPMDTLTIEEGKV

Target ORF information:

RefSeq Version	NM_213471.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio syntaxin binding protein 3 (stxbp3), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_213471.1

ORF Insert Sequence:

ATGGCAACTG GAGCAGACCA CGGCTTGAAA AAAATAGTAT GGCAAAGGAT CAGGGACACC 
ATCATTGCAG ACTGCAAAAA GTGGAACATC CTCATACTAG ACGATTTCAC CACACGCCTA 
CTGTCCTCGT GCTGCAAGAT GTCTGATCTC ATGTCCGAGG GCATCTCAGT TTTGGAGAAC 
CTGTTCAAAA ACAGAGAGCC GGTTCCAGAT ATGAAGGCCA TCTACTTCAT GGCTCCCACT 
GTTGAGTGTA TTGATGCATT TATTAATGAC TTCAAACCCA AGCCCAAATA CAAAGCTGCG 
TATGTCTTCT TCACGGACTA CTGTCCTGAT GAGCTCTTCG ACAAAATGAA GAAGAACTGC 
GCCAAGCACA TTAAAAAGTG TAAAGAGATC AACATCTCCT TTCTGCCACA GGAAGCACAA 
GTGTTCACCT GCGAGAACCC AGAGGCCTTT AAGAAGATCT ACAGTGGGTT CAGTCAGGAC 
AGAGAGAAGA CGCTGGATAA AATTGCAGAT CAGATTGTAA CTCTCTGTGC TACGCTGGAC 
GAGTATCCTG GAGTCCGATA CAAAAGAGAA TCGACTCCTG GATATGGAAA GATGTTGGCT 
GAACTTGTTG ATAATAAACT GGCCCGGCAT TATGAGTTGG ATGAAATTAC GACAAAAAAG 
GAAAAAACAC CGGCGCAGCT GCTGATTGTT GACCGTGCAA TGGACCCTGT TAGTCCCATT 
CTTCACGAGC TCACTTACCA AGCCATGGCT TATGACCTCA TACCTATAAA TAACAACATC 
TACGAGTATA AAATGAAGGA TGGCTCCAAG AAAGAAGCTT TACTAAACGA AGATGATGAA 
TTATGGGTCA AACTGCGGCA CAGGCACATT GCTGAGGTCA CTGAGCAAAT CCCCAAACTG 
GTGAAGGACA TCTCTGCCAG CAGAGACGAG AAACAACAGG GTGATGGGAA GATCACAATC 
GGAGCCCTTT CACAGCTCAT GAAGAAGATG CCAGCTTTCC GCAAGCAAGA GACACAGAAA 
ACCGTGCACC TACATTTAGC CGAGGATCTG ATGGGCCATT ACCAGAAGAA CGTGGAGAAA 
CTCTGCAAAG CGGAGCAGGA TCTGGCTGTC GGTGCAGACG CTGAGGGACA GAAGGTTAAA 
GACCCCATGC GGACGCTGCT TCCTGTGCTT TTACACCAGC ACGACACCAC CGACAAGATC 
CGCGCCGTCC TGCTCTACAT CTTCAGCCTC AATGGTACGA CAACGGAGAA TCTGAATAAA 
CTGATTCAGA ATGTGAAAAT CGAGGATAAG GACGGCTACA TCCAGAACTG GAACCAGCTG 
GGAGTCCCCA TCCTCTCCTC GTCAAACAGT TCTCGTAAAG TAGCTCGGAG AGACCGCTCG 
GAACAGGAGA CGTATAATGT CTCTCGCTGG ACACCCGTCA TTAAAGACAT AATGGAGGAC 
GCAGTGGAAA ATAAACTGGA TATCAAAGAC TGGCCGTTTC AGTCTGAATG TCCGTCTGCG 
TGGAACGGCT CTCGGGCTGT AAGTGCACGG CAGAAGCACA AGGGCAGCTC TCCAGGGGAC 
ATGAAGAACG GCTCGCGCCT CATCATCTTC GTTCTGGGTG GAGTCAGCTA CTCTGAGATG 
CGCTGCGCTT ATGAAGTCAC CAACACTAAT AAATCCTGTG AGGTCATCAT CGGCTCGACA 
CACATCCTCA CTCCTCGCAG TCTCCTGGAG GACATTTATA ACCTGGGGAA AAAACCCATG 
GACACTTTGA CCATCGAGGA GGGCAAAGTC TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

STXBP3 ( XM_009296575.3 ) cDNA ORF clone, Danio rerio(Zebrafish) -> XP_009294850.1 Danio rerio syntaxin binding protein 3 (stxbp3), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ODa40920
Clone ID Related Accession (Same CDS sequence)	XM_009296575.3 , XM_009296575.2
Accession Version	XM_009296575.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1782bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-06-14
Organism	Danio rerio(zebrafish)
Product	syntaxin-binding protein 3 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007134.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_009296575.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCAACTG GAGCAGACCA CGGCTTGAAA AAAATAGTAT GGCAAAGGAT CAGGGACACC 
ATCATTGCAG ACTGCAAAAA GTGGAACATC CTCATACTAG ACGATTTCAC CACACGCCTA 
CTGTCCTCGT GCTGCAAGAT GTCTGATCTC ATGTCCGAGG GCATCTCAGT TTTGGAGAAC 
CTGTTCAAAA ACAGAGAGCC GGTTCCAGAT ATGAAGGCCA TCTACTTCAT GGCTCCCACT 
GTTGAGTGTA TTGATGCATT TATTAATGAC TTCAAACCCA AGCCCAAATA CAAAGCTGCG 
TATGTCTTCT TCACGGACTA CTGTCCTGAT GAGCTCTTCG ACAAAATGAA GAAGAACTGC 
GCCAAGCACA TTAAAAAGTG TAAAGAGATC AACATCTCCT TTCTGCCACA GGAAGCACAA 
GTGTTCACCT GCGAGAACCC AGAGGCCTTT AAGAAGATCT ACAGTGGGTT CAGTCAGGAC 
AGAGAGAAGA CGCTGGATAA AATTGCAGAT CAGATTGTAA CTCTCTGTGC TACGCTGGAC 
GAGTATCCTG GAGTCCGATA CAAAAGAGAA TCGACTCCTG GATATGGAAA GATGTTGGCT 
GAACTTGTTG ATAATAAACT GGCCCGGCAT TATGAGTTGG ATGAAATTAC GACAAAAAAG 
GAAAAAACAC CGGCGCAGCT GCTGATTGTT GACCGTGCAA TGGACCCTGT TAGTCCCATT 
CTTCACGAGC TCACTTACCA AGCCATGGCT TATGACCTCA TACCTATAAA TAACAACATC 
TACGAGTATA AAATGAAGGA TGGCTCCAAG AAAGAAGCTT TACTAAACGA AGATGATGAA 
TTATGGGTCA AACTGCGGCA CAGGCACATT GCTGAGGTCA CTGAGCAAAT CCCCAAACTG 
GTGAAGGACA TCTCTGCCAG CAGAGACGAG AAACAACAGG GTGATGGGAA GATCACAATC 
GGAGCCCTTT CACAGCTCAT GAAGAAGATG CCAGCTTTCC GCAAGCAAGT GACACAGAAA 
ACCGTGCACC TACATTTAGC CGAGGATCTG ATGGGCCATT ACCAGAAGAA CGTGGAGAAA 
CTCTGCAAAG CGGAGCAGGA TCTGGCTGTC GGTGCAGACG CTGAGGGACA GAAGGTTAAA 
GACCCCATGC GGACGCTGCT TCCTGTGCTT TTACACCAGC ACGACACCAC CGACAAGATC 
CGCGCCGTCC TGCTCTACAT CTTCAGCCTC AATGGTACGA CAACGGAGAA TCTGAATAAA 
CTGATTCAGA ATGTGAAAAT CGAGGATAAG GACGGCTACA TCCAGAACTG GAACCAGCTG 
GGAGTCCCCA TCCTCTCCTC GTCAAACAGT TCTCGTAAAG TAGCTCGGAG AGACCGCTCG 
GAACAGGAGA CGTATAATGT CTCTCGCTGG ACACCCGTCA TTAAAGACAT AATGGAGGAC 
GCAGTGGAAA ATAAACTGGA TATCAAAGAC TGGCCGTTTC AGTCTGAATG TCCGTCTGCG 
TGGAACGGCT CTCGGGCTGT AAGAGTGCTG AGTGCACGGC AGAAGCACAA GGGCAGCTCT 
CCAGGGGACA TGAAGAACGG CTCGCGCCTC ATCATCTTCG TTCTGGGTGG AGTCAGCTAC 
TCTGAGATGC GCTGCGCTTA TGAAGTCACC AACACTAATA AATCCTGTGA GGTCATCATC 
GGCTCGACAC ACATCCTCAC TCCTCGCAGT CTCCTGGAGG ACATTTATAA CCTGGGGAAA 
AAACCCATGG ACACTTTGAC CATCGAGGAG GGCAAAGTCT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_009294850.1
CDS	51..1832
Translation	MATGADHGLKKIVWQRIRDTIIADCKKWNILILDDFTTRLLSSCCKMSDLMSEGISVLENLFKNREPVPDMKAIYFMAPTVECIDAFINDFKPKPKYKAAYVFFTDYCPDELFDKMKKNCAKHIKKCKEINISFLPQEAQVFTCENPEAFKKIYSGFSQDREKTLDKIADQIVTLCATLDEYPGVRYKRESTPGYGKMLAELVDNKLARHYELDEITTKKEKTPAQLLIVDRAMDPVSPILHELTYQAMAYDLIPINNNIYEYKMKDGSKKEALLNEDDELWVKLRHRHIAEVTEQIPKLVKDISASRDEKQQGDGKITIGALSQLMKKMPAFRKQVTQKTVHLHLAEDLMGHYQKNVEKLCKAEQDLAVGADAEGQKVKDPMRTLLPVLLHQHDTTDKIRAVLLYIFSLNGTTTENLNKLIQNVKIEDKDGYIQNWNQLGVPILSSSNSSRKVARRDRSEQETYNVSRWTPVIKDIMEDAVENKLDIKDWPFQSECPSAWNGSRAVRVLSARQKHKGSSPGDMKNGSRLIIFVLGGVSYSEMRCAYEVTNTNKSCEVIIGSTHILTPRSLLEDIYNLGKKPMDTLTIEEGKV

Target ORF information:

RefSeq Version	XM_009296575.3
Organism	Danio rerio(zebrafish)
Definition	Danio rerio syntaxin binding protein 3 (stxbp3), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_009296575.3

ORF Insert Sequence:

ATGGCAACTG GAGCAGACCA CGGCTTGAAA AAAATAGTAT GGCAAAGGAT CAGGGACACC 
ATCATTGCAG ACTGCAAAAA GTGGAACATC CTCATACTAG ACGATTTCAC CACACGCCTA 
CTGTCCTCGT GCTGCAAGAT GTCTGATCTC ATGTCCGAGG GCATCTCAGT TTTGGAGAAC 
CTGTTCAAAA ACAGAGAGCC GGTTCCAGAT ATGAAGGCCA TCTACTTCAT GGCTCCCACT 
GTTGAGTGTA TTGATGCATT TATTAATGAC TTCAAACCCA AGCCCAAATA CAAAGCTGCG 
TATGTCTTCT TCACGGACTA CTGTCCTGAT GAGCTCTTCG ACAAAATGAA GAAGAACTGC 
GCCAAGCACA TTAAAAAGTG TAAAGAGATC AACATCTCCT TTCTGCCACA GGAAGCACAA 
GTGTTCACCT GCGAGAACCC AGAGGCCTTT AAGAAGATCT ACAGTGGGTT CAGTCAGGAC 
AGAGAGAAGA CGCTGGATAA AATTGCAGAT CAGATTGTAA CTCTCTGTGC TACGCTGGAC 
GAGTATCCTG GAGTCCGATA CAAAAGAGAA TCGACTCCTG GATATGGAAA GATGTTGGCT 
GAACTTGTTG ATAATAAACT GGCCCGGCAT TATGAGTTGG ATGAAATTAC GACAAAAAAG 
GAAAAAACAC CGGCGCAGCT GCTGATTGTT GACCGTGCAA TGGACCCTGT TAGTCCCATT 
CTTCACGAGC TCACTTACCA AGCCATGGCT TATGACCTCA TACCTATAAA TAACAACATC 
TACGAGTATA AAATGAAGGA TGGCTCCAAG AAAGAAGCTT TACTAAACGA AGATGATGAA 
TTATGGGTCA AACTGCGGCA CAGGCACATT GCTGAGGTCA CTGAGCAAAT CCCCAAACTG 
GTGAAGGACA TCTCTGCCAG CAGAGACGAG AAACAACAGG GTGATGGGAA GATCACAATC 
GGAGCCCTTT CACAGCTCAT GAAGAAGATG CCAGCTTTCC GCAAGCAAGT GACACAGAAA 
ACCGTGCACC TACATTTAGC CGAGGATCTG ATGGGCCATT ACCAGAAGAA CGTGGAGAAA 
CTCTGCAAAG CGGAGCAGGA TCTGGCTGTC GGTGCAGACG CTGAGGGACA GAAGGTTAAA 
GACCCCATGC GGACGCTGCT TCCTGTGCTT TTACACCAGC ACGACACCAC CGACAAGATC 
CGCGCCGTCC TGCTCTACAT CTTCAGCCTC AATGGTACGA CAACGGAGAA TCTGAATAAA 
CTGATTCAGA ATGTGAAAAT CGAGGATAAG GACGGCTACA TCCAGAACTG GAACCAGCTG 
GGAGTCCCCA TCCTCTCCTC GTCAAACAGT TCTCGTAAAG TAGCTCGGAG AGACCGCTCG 
GAACAGGAGA CGTATAATGT CTCTCGCTGG ACACCCGTCA TTAAAGACAT AATGGAGGAC 
GCAGTGGAAA ATAAACTGGA TATCAAAGAC TGGCCGTTTC AGTCTGAATG TCCGTCTGCG 
TGGAACGGCT CTCGGGCTGT AAGAGTGCTG AGTGCACGGC AGAAGCACAA GGGCAGCTCT 
CCAGGGGACA TGAAGAACGG CTCGCGCCTC ATCATCTTCG TTCTGGGTGG AGTCAGCTAC 
TCTGAGATGC GCTGCGCTTA TGAAGTCACC AACACTAATA AATCCTGTGA GGTCATCATC 
GGCTCGACAC ACATCCTCAC TCCTCGCAGT CTCCTGGAGG ACATTTATAA CCTGGGGAAA 
AAACCCATGG ACACTTTGAC CATCGAGGAG GGCAAAGTCT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

STXBP3 ( XM_009296575.2 ) cDNA ORF clone, Danio rerio(Zebrafish) -> XP_009294850.1 Danio rerio syntaxin binding protein 3 (stxbp3), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ODa40920
Clone ID Related Accession (Same CDS sequence)	XM_009296575.3 , XM_009296575.2
Accession Version	XM_009296575.2	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1782bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-06-23
Organism	Danio rerio(Zebrafish)
Product	syntaxin-binding protein 3 isoform X1
Comment	MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007134.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_009296575.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCAACTG GAGCAGACCA CGGCTTGAAA AAAATAGTAT GGCAAAGGAT CAGGGACACC 
ATCATTGCAG ACTGCAAAAA GTGGAACATC CTCATACTAG ACGATTTCAC CACACGCCTA 
CTGTCCTCGT GCTGCAAGAT GTCTGATCTC ATGTCCGAGG GCATCTCAGT TTTGGAGAAC 
CTGTTCAAAA ACAGAGAGCC GGTTCCAGAT ATGAAGGCCA TCTACTTCAT GGCTCCCACT 
GTTGAGTGTA TTGATGCATT TATTAATGAC TTCAAACCCA AGCCCAAATA CAAAGCTGCG 
TATGTCTTCT TCACGGACTA CTGTCCTGAT GAGCTCTTCG ACAAAATGAA GAAGAACTGC 
GCCAAGCACA TTAAAAAGTG TAAAGAGATC AACATCTCCT TTCTGCCACA GGAAGCACAA 
GTGTTCACCT GCGAGAACCC AGAGGCCTTT AAGAAGATCT ACAGTGGGTT CAGTCAGGAC 
AGAGAGAAGA CGCTGGATAA AATTGCAGAT CAGATTGTAA CTCTCTGTGC TACGCTGGAC 
GAGTATCCTG GAGTCCGATA CAAAAGAGAA TCGACTCCTG GATATGGAAA GATGTTGGCT 
GAACTTGTTG ATAATAAACT GGCCCGGCAT TATGAGTTGG ATGAAATTAC GACAAAAAAG 
GAAAAAACAC CGGCGCAGCT GCTGATTGTT GACCGTGCAA TGGACCCTGT TAGTCCCATT 
CTTCACGAGC TCACTTACCA AGCCATGGCT TATGACCTCA TACCTATAAA TAACAACATC 
TACGAGTATA AAATGAAGGA TGGCTCCAAG AAAGAAGCTT TACTAAACGA AGATGATGAA 
TTATGGGTCA AACTGCGGCA CAGGCACATT GCTGAGGTCA CTGAGCAAAT CCCCAAACTG 
GTGAAGGACA TCTCTGCCAG CAGAGACGAG AAACAACAGG GTGATGGGAA GATCACAATC 
GGAGCCCTTT CACAGCTCAT GAAGAAGATG CCAGCTTTCC GCAAGCAAGT GACACAGAAA 
ACCGTGCACC TACATTTAGC CGAGGATCTG ATGGGCCATT ACCAGAAGAA CGTGGAGAAA 
CTCTGCAAAG CGGAGCAGGA TCTGGCTGTC GGTGCAGACG CTGAGGGACA GAAGGTTAAA 
GACCCCATGC GGACGCTGCT TCCTGTGCTT TTACACCAGC ACGACACCAC CGACAAGATC 
CGCGCCGTCC TGCTCTACAT CTTCAGCCTC AATGGTACGA CAACGGAGAA TCTGAATAAA 
CTGATTCAGA ATGTGAAAAT CGAGGATAAG GACGGCTACA TCCAGAACTG GAACCAGCTG 
GGAGTCCCCA TCCTCTCCTC GTCAAACAGT TCTCGTAAAG TAGCTCGGAG AGACCGCTCG 
GAACAGGAGA CGTATAATGT CTCTCGCTGG ACACCCGTCA TTAAAGACAT AATGGAGGAC 
GCAGTGGAAA ATAAACTGGA TATCAAAGAC TGGCCGTTTC AGTCTGAATG TCCGTCTGCG 
TGGAACGGCT CTCGGGCTGT AAGAGTGCTG AGTGCACGGC AGAAGCACAA GGGCAGCTCT 
CCAGGGGACA TGAAGAACGG CTCGCGCCTC ATCATCTTCG TTCTGGGTGG AGTCAGCTAC 
TCTGAGATGC GCTGCGCTTA TGAAGTCACC AACACTAATA AATCCTGTGA GGTCATCATC 
GGCTCGACAC ACATCCTCAC TCCTCGCAGT CTCCTGGAGG ACATTTATAA CCTGGGGAAA 
AAACCCATGG ACACTTTGAC CATCGAGGAG GGCAAAGTCT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_009294850.1
CDS	47..1828
Translation	MATGADHGLKKIVWQRIRDTIIADCKKWNILILDDFTTRLLSSCCKMSDLMSEGISVLENLFKNREPVPDMKAIYFMAPTVECIDAFINDFKPKPKYKAAYVFFTDYCPDELFDKMKKNCAKHIKKCKEINISFLPQEAQVFTCENPEAFKKIYSGFSQDREKTLDKIADQIVTLCATLDEYPGVRYKRESTPGYGKMLAELVDNKLARHYELDEITTKKEKTPAQLLIVDRAMDPVSPILHELTYQAMAYDLIPINNNIYEYKMKDGSKKEALLNEDDELWVKLRHRHIAEVTEQIPKLVKDISASRDEKQQGDGKITIGALSQLMKKMPAFRKQVTQKTVHLHLAEDLMGHYQKNVEKLCKAEQDLAVGADAEGQKVKDPMRTLLPVLLHQHDTTDKIRAVLLYIFSLNGTTTENLNKLIQNVKIEDKDGYIQNWNQLGVPILSSSNSSRKVARRDRSEQETYNVSRWTPVIKDIMEDAVENKLDIKDWPFQSECPSAWNGSRAVRVLSARQKHKGSSPGDMKNGSRLIIFVLGGVSYSEMRCAYEVTNTNKSCEVIIGSTHILTPRSLLEDIYNLGKKPMDTLTIEEGKV

Target ORF information:

RefSeq Version	XM_009296575.2
Organism	Danio rerio(Zebrafish)
Definition	Danio rerio syntaxin binding protein 3 (stxbp3), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_009296575.2

ORF Insert Sequence:

ATGGCAACTG GAGCAGACCA CGGCTTGAAA AAAATAGTAT GGCAAAGGAT CAGGGACACC 
ATCATTGCAG ACTGCAAAAA GTGGAACATC CTCATACTAG ACGATTTCAC CACACGCCTA 
CTGTCCTCGT GCTGCAAGAT GTCTGATCTC ATGTCCGAGG GCATCTCAGT TTTGGAGAAC 
CTGTTCAAAA ACAGAGAGCC GGTTCCAGAT ATGAAGGCCA TCTACTTCAT GGCTCCCACT 
GTTGAGTGTA TTGATGCATT TATTAATGAC TTCAAACCCA AGCCCAAATA CAAAGCTGCG 
TATGTCTTCT TCACGGACTA CTGTCCTGAT GAGCTCTTCG ACAAAATGAA GAAGAACTGC 
GCCAAGCACA TTAAAAAGTG TAAAGAGATC AACATCTCCT TTCTGCCACA GGAAGCACAA 
GTGTTCACCT GCGAGAACCC AGAGGCCTTT AAGAAGATCT ACAGTGGGTT CAGTCAGGAC 
AGAGAGAAGA CGCTGGATAA AATTGCAGAT CAGATTGTAA CTCTCTGTGC TACGCTGGAC 
GAGTATCCTG GAGTCCGATA CAAAAGAGAA TCGACTCCTG GATATGGAAA GATGTTGGCT 
GAACTTGTTG ATAATAAACT GGCCCGGCAT TATGAGTTGG ATGAAATTAC GACAAAAAAG 
GAAAAAACAC CGGCGCAGCT GCTGATTGTT GACCGTGCAA TGGACCCTGT TAGTCCCATT 
CTTCACGAGC TCACTTACCA AGCCATGGCT TATGACCTCA TACCTATAAA TAACAACATC 
TACGAGTATA AAATGAAGGA TGGCTCCAAG AAAGAAGCTT TACTAAACGA AGATGATGAA 
TTATGGGTCA AACTGCGGCA CAGGCACATT GCTGAGGTCA CTGAGCAAAT CCCCAAACTG 
GTGAAGGACA TCTCTGCCAG CAGAGACGAG AAACAACAGG GTGATGGGAA GATCACAATC 
GGAGCCCTTT CACAGCTCAT GAAGAAGATG CCAGCTTTCC GCAAGCAAGT GACACAGAAA 
ACCGTGCACC TACATTTAGC CGAGGATCTG ATGGGCCATT ACCAGAAGAA CGTGGAGAAA 
CTCTGCAAAG CGGAGCAGGA TCTGGCTGTC GGTGCAGACG CTGAGGGACA GAAGGTTAAA 
GACCCCATGC GGACGCTGCT TCCTGTGCTT TTACACCAGC ACGACACCAC CGACAAGATC 
CGCGCCGTCC TGCTCTACAT CTTCAGCCTC AATGGTACGA CAACGGAGAA TCTGAATAAA 
CTGATTCAGA ATGTGAAAAT CGAGGATAAG GACGGCTACA TCCAGAACTG GAACCAGCTG 
GGAGTCCCCA TCCTCTCCTC GTCAAACAGT TCTCGTAAAG TAGCTCGGAG AGACCGCTCG 
GAACAGGAGA CGTATAATGT CTCTCGCTGG ACACCCGTCA TTAAAGACAT AATGGAGGAC 
GCAGTGGAAA ATAAACTGGA TATCAAAGAC TGGCCGTTTC AGTCTGAATG TCCGTCTGCG 
TGGAACGGCT CTCGGGCTGT AAGAGTGCTG AGTGCACGGC AGAAGCACAA GGGCAGCTCT 
CCAGGGGACA TGAAGAACGG CTCGCGCCTC ATCATCTTCG TTCTGGGTGG AGTCAGCTAC 
TCTGAGATGC GCTGCGCTTA TGAAGTCACC AACACTAATA AATCCTGTGA GGTCATCATC 
GGCTCGACAC ACATCCTCAC TCCTCGCAGT CTCCTGGAGG ACATTTATAA CCTGGGGAAA 
AAACCCATGG ACACTTTGAC CATCGAGGAG GGCAAAGTCT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Evolution of complexity in the zebrafish synapse proteome.
Nature communications814613(2017 Mar)
Bay?s ?,Collins MO,Reig-Viader R,Gou G,Goulding D,Izquierdo A,Choudhary JS,Emes RD,Grant SG

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J

Rab32 and Rab38 genes in chordate pigmentation: an evolutionary perspective.
BMC evolutionary biology1626(2016 Jan)
Coppola U,Annona G,D'Aniello S,Ristoratore F

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

Identification of 315 genes essential for early zebrafish development.
Proceedings of the National Academy of Sciences of the United States of America101(35)12792-7(2004 Aug)
Amsterdam A,Nissen RM,Sun Z,Swindell EC,Farrington S,Hopkins N

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STXBP3 cDNA ORF clone, Danio rerio(Zebrafish)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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