tm9sf3 cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	tm9sf3
Entrez Gene ID	406698
Full Name	transmembrane 9 superfamily member 3
Synonyms	fb75h12,wu:fa94f05,wu:fb75h12,zgc:56246
General protein information	Preferred Names transmembrane 9 superfamily member 3 Names transmembrane 9 superfamily member 3
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_213389.1	NP_998554.1	transmembrane 9 superfamily member 3 precursor

Pathways from BioSystems

Homologies

	TM9SF3	XP_001101439.1
Gallus gallus (chicken)	TM9SF3	XP_421629.4
Danio rerio (zebrafish)	tm9sf3	NP_998554.1
Canis lupus familiaris (dog)	TM9SF3	XP_849773.1
Arabidopsis thaliana (thale cress)	TMN1	NP_563881.1
Pan troglodytes (chimpanzee)	TM9SF3	XP_507954.3
Bos taurus (cattle)	TM9SF3	NP_001180146.1
Rattus norvegicus (Norway rat)	Tm9sf3	XP_006231475.1
Drosophila melanogaster (fruit fly)	CG10590	NP_647979.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP004882	XP_314301.3
Oryza sativa (rice)	Os02g0552000	NP_001047104.1
Oryza sativa (rice)	Os12g0175700	NP_001066292.1
Homo sapiens (human)	TM9SF3	NP_064508.3
Mus musculus (house mouse)	Tm9sf3	NP_579930.1
Oryza sativa (rice)	Os11g0181100	NP_001065897.1
Caenorhabditis elegans (roundworm)	Y41D4A.4	NP_500130.1
Xenopus tropicalis (tropical clawed frog)	tm9sf3	XP_002936010.2

Gene Ontology
Bibliography

Related articles in PubMed

Evolution of complexity in the zebrafish synapse proteome.
Bay?s ?, Collins MO, Reig-Viader R, Gou G, Goulding D, Izquierdo A, Choudhary JS, Emes RD, Grant SG
Nature communications814613(2017 Mar)

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)

Evolutionary comparison reveals that diverging CTCF sites are signatures of ancestral topological associating domains borders.
G?mez-Mar?n C, Tena JJ, Acemel RD, L?pez-Mayorga M, Naranjo S, de la Calle-Mustienes E, Maeso I, Beccari L, Aneas I, Vielmas E, Bovolenta P, Nobrega MA, Carvajal J, G?mez-Skarmeta JL
Proceedings of the National Academy of Sciences of the United States of America112(24)7542-7(2015 Jun)

Comparative analysis of nonaspanin protein sequences and expression studies in zebrafish.
Pruvot B, Laurens V, Salvadori F, Solary E, Pichon L, Chluba J
Immunogenetics62(10)681-99(2010 Oct)

Variation at the NFATC2 locus increases the risk of thiazolidinedione-induced edema in the Diabetes REduction Assessment with ramipril and rosiglitazone Medication (DREAM) study.
Bailey SD, Xie C, Do R, Montpetit A, Diaz R, Mohan V, Keavney B, Yusuf S, Gerstein HC, Engert JC, Anand S,
Diabetes care33(10)2250-3(2010 Oct)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

A conserved TRAF2 binding domain is predicted in the cytoplasmic regions of TM9SF3.
Title: Comparative analysis of nonaspanin protein sequences and expression studies in zebrafish.

Observational study of gene-disease association, gene-environment interaction, and pharmacogenomic / toxicogenomic. (HuGE Navigator)
Title: Variation at the NFATC2 locus increases the risk of thiazolidinedione-induced edema in the Diabetes REduction Assessment with ramipril and rosiglitazone Medication (DREAM) study.

Observational study of gene-disease association. (HuGE Navigator)
Title: Gene-centric association signals for lipids and apolipoproteins identified via the HumanCVD BeadChip.

The following tm9sf3 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the tm9sf3 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa31933	NM_213389.1 Latest version!	Danio rerio transmembrane 9 superfamily member 3 (tm9sf3), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$342.30 $489.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

tm9sf3 ( NM_213389.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_998554.1 Danio rerio transmembrane 9 superfamily member 3 (tm9sf3), mRNA.

Price & Availability↑

CloneID	ODa31933
Clone ID Related Accession (Same CDS sequence)	NM_213389.1
Accession Version	NM_213389.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1761bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-01-26
Organism	Danio rerio(zebrafish)
Product	transmembrane 9 superfamily member 3 precursor
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC046021.1. ##Evidence-Data-START## Transcript exon combination :: BC046021.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350] ##Evidence-Data-END##

ATGGGGCTCT GCAAGTGGAC GTTTGAAGTG GTTGCCTTGA CGGCTGTTTT TAGTTCGTTC 
ATACCAGTTC GAGCAGATGA ACACGAGCAC AAGTACACAG ATAAAGAAGA GGTGGTTTTA 
TGGATGAATA CAGTGGGCCC TTATCACAAC CGACAGGAGA CCTATAAGTA CTTCTCCCTA 
CCGTTCTGTG TGGGAACGAA AAAAACTATT AGTCATTATC ATGAGACATT AGGAGAGGCG 
CTACAGGGGG TTGAATTGGA GTTCAGCGGT CTGGACATCA AGTTCAAAGA GGAGGTGTTG 
CAGACGACAT ACTGTGACAT TGAACTAGAC AAACCTAAAA GAGATGCATT TGTCTATGCC 
ATCAAGAACC ACTACTGGTA CCAAATGTAC ATAGATGACC TTCCCATCTG GGGAATTGTT 
GGTGAAGCTG ATGAGAATGG AGAGGACTAT TACCTTTGGA CTTACAAAAA GCTGGAGATC 
GGACATAATG GGAACAGAAT TGTGGATGTT AACCTAACCA GTGAGGGCAA GGTTAAGCTT 
GTTCCAAACA CGAGAATTCC CATGTCATAC TCTGTCAAGT GGAAGAAATC TGATGTGAAA 
TTTGAGGATA GATTTGACAA ATACCTTGAT CCATCTTTCT TTCAACACAG AATTCACTGG 
TTCTCAATAT TCAACTCATT CATGATGGTG ATTTTCCTGG TGGGCCTTGT TTCAATGATC 
CTGATGAGAA CATTAAGGAA AGACTATGCC AGATACAGCA AAGAGGAGGA AATGGATGAC 
ATGGATCGTG ATCCTGGTGA TGAATATGGC TGGAAGCAGG TTCACGGGGA TGTGTTCAGG 
CCATCCAGTC ACCCGCTGAT CTTCTCCTCC CTCATTGGCT CTGGCTGTCA AATTTTTTCA 
GTTTCCCTTA TAGTCATAAT TTTGGCCATG ATTGAGGACT TGTATACAGA GAGAGGGTCC 
ATGTTGAGTA CAGCCATATT TGTTTATGCT GCCACGTCTC CAGTCAATGG CTACTTTGGT 
GGAAGCCTAT ATGCAAAACA AGGAGGGAGA AGATGGATAA AGCAGATGTT CATTGGAGCC 
TTCCTGATTC CTGCAATGGT GTGTGGTACA GCGTTTTTCA TCAACTTCAT CGCCATCTAC 
TACCATGCCT CAAGAGCAAT CCCATTCGGC ACTATGGTTG CGGTGTGCTG CATCTGCTTA 
TTTGTAATTC TACCTCTGAA CCTGGTGGGG ACGATCCTGG GCAGAAACCT CTCCGGACAG 
CCCAACTTTC CTTGTAGAGT CAATGCTGTA CCCAGACCCA TCCCAGAAAA GAAATGGTTT 
ATGGAGCCAG CAGTTATCGT GTGTTTAGGT GGCATCCTTC CATTCGGCTC GATATTCATT 
GAAATGTACT TCATTTTCAC ATCTTTCTGG GCCTACAAGA TTTACTATGT GTATGGATTT 
ATGATGCTGG TGCTGGTGAT CCTGTGCATC GTTACTGTCT GCGTCACCAT TGTCTGCACC 
TACTTCCTTC TCAATGCAGA AGACTACAGA TGGCAGTGGA CAAGCTTTCT CTCTGCAGCG 
TCAACAGCAG TTTATGTTTA CATGTACTCC TTCTACTACT ATTTCTTCAA AACAAAGATG 
TATGGCTTAT TCCAGACGTC ATTCTACTTT GGCTACATGG CTGTGTTCAG CACTGCTCTG 
GGAATCATGT GTGGAGCGGT GGGTTACATG GGAACAAGTG CCTTTGTGAG GAAGATCTAC 
ACAAATGTGA AAATCGACTA A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_998554.1
CDS	98..1858
Translation	MGLCKWTFEVVALTAVFSSFIPVRADEHEHKYTDKEEVVLWMNTVGPYHNRQETYKYFSLPFCVGTKKTISHYHETLGEALQGVELEFSGLDIKFKEEVLQTTYCDIELDKPKRDAFVYAIKNHYWYQMYIDDLPIWGIVGEADENGEDYYLWTYKKLEIGHNGNRIVDVNLTSEGKVKLVPNTRIPMSYSVKWKKSDVKFEDRFDKYLDPSFFQHRIHWFSIFNSFMMVIFLVGLVSMILMRTLRKDYARYSKEEEMDDMDRDPGDEYGWKQVHGDVFRPSSHPLIFSSLIGSGCQIFSVSLIVIILAMIEDLYTERGSMLSTAIFVYAATSPVNGYFGGSLYAKQGGRRWIKQMFIGAFLIPAMVCGTAFFINFIAIYYHASRAIPFGTMVAVCCICLFVILPLNLVGTILGRNLSGQPNFPCRVNAVPRPIPEKKWFMEPAVIVCLGGILPFGSIFIEMYFIFTSFWAYKIYYVYGFMMLVLVILCIVTVCVTIVCTYFLLNAEDYRWQWTSFLSAASTAVYVYMYSFYYYFFKTKMYGLFQTSFYFGYMAVFSTALGIMCGAVGYMGTSAFVRKIYTNVKID

Target ORF information:

RefSeq Version	NM_213389.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio transmembrane 9 superfamily member 3 (tm9sf3), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_213389.1

ORF Insert Sequence:

ATGGGGCTCT GCAAGTGGAC GTTTGAAGTG GTTGCCTTGA CGGCTGTTTT TAGTTCGTTC 
ATACCAGTTC GAGCAGATGA ACACGAGCAC AAGTACACAG ATAAAGAAGA GGTGGTTTTA 
TGGATGAATA CAGTGGGCCC TTATCACAAC CGACAGGAGA CCTATAAGTA CTTCTCCCTA 
CCGTTCTGTG TGGGAACGAA AAAAACTATT AGTCATTATC ATGAGACATT AGGAGAGGCG 
CTACAGGGGG TTGAATTGGA GTTCAGCGGT CTGGACATCA AGTTCAAAGA GGAGGTGTTG 
CAGACGACAT ACTGTGACAT TGAACTAGAC AAACCTAAAA GAGATGCATT TGTCTATGCC 
ATCAAGAACC ACTACTGGTA CCAAATGTAC ATAGATGACC TTCCCATCTG GGGAATTGTT 
GGTGAAGCTG ATGAGAATGG AGAGGACTAT TACCTTTGGA CTTACAAAAA GCTGGAGATC 
GGACATAATG GGAACAGAAT TGTGGATGTT AACCTAACCA GTGAGGGCAA GGTTAAGCTT 
GTTCCAAACA CGAGAATTCC CATGTCATAC TCTGTCAAGT GGAAGAAATC TGATGTGAAA 
TTTGAGGATA GATTTGACAA ATACCTTGAT CCATCTTTCT TTCAACACAG AATTCACTGG 
TTCTCAATAT TCAACTCATT CATGATGGTG ATTTTCCTGG TGGGCCTTGT TTCAATGATC 
CTGATGAGAA CATTAAGGAA AGACTATGCC AGATACAGCA AAGAGGAGGA AATGGATGAC 
ATGGATCGTG ATCCTGGTGA TGAATATGGC TGGAAGCAGG TTCACGGGGA TGTGTTCAGG 
CCATCCAGTC ACCCGCTGAT CTTCTCCTCC CTCATTGGCT CTGGCTGTCA AATTTTTTCA 
GTTTCCCTTA TAGTCATAAT TTTGGCCATG ATTGAGGACT TGTATACAGA GAGAGGGTCC 
ATGTTGAGTA CAGCCATATT TGTTTATGCT GCCACGTCTC CAGTCAATGG CTACTTTGGT 
GGAAGCCTAT ATGCAAAACA AGGAGGGAGA AGATGGATAA AGCAGATGTT CATTGGAGCC 
TTCCTGATTC CTGCAATGGT GTGTGGTACA GCGTTTTTCA TCAACTTCAT CGCCATCTAC 
TACCATGCCT CAAGAGCAAT CCCATTCGGC ACTATGGTTG CGGTGTGCTG CATCTGCTTA 
TTTGTAATTC TACCTCTGAA CCTGGTGGGG ACGATCCTGG GCAGAAACCT CTCCGGACAG 
CCCAACTTTC CTTGTAGAGT CAATGCTGTA CCCAGACCCA TCCCAGAAAA GAAATGGTTT 
ATGGAGCCAG CAGTTATCGT GTGTTTAGGT GGCATCCTTC CATTCGGCTC GATATTCATT 
GAAATGTACT TCATTTTCAC ATCTTTCTGG GCCTACAAGA TTTACTATGT GTATGGATTT 
ATGATGCTGG TGCTGGTGAT CCTGTGCATC GTTACTGTCT GCGTCACCAT TGTCTGCACC 
TACTTCCTTC TCAATGCAGA AGACTACAGA TGGCAGTGGA CAAGCTTTCT CTCTGCAGCG 
TCAACAGCAG TTTATGTTTA CATGTACTCC TTCTACTACT ATTTCTTCAA AACAAAGATG 
TATGGCTTAT TCCAGACGTC ATTCTACTTT GGCTACATGG CTGTGTTCAG CACTGCTCTG 
GGAATCATGT GTGGAGCGGT GGGTTACATG GGAACAAGTG CCTTTGTGAG GAAGATCTAC 
ACAAATGTGA AAATCGACTA A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Evolution of complexity in the zebrafish synapse proteome.
Nature communications814613(2017 Mar)
Bay?s ?,Collins MO,Reig-Viader R,Gou G,Goulding D,Izquierdo A,Choudhary JS,Emes RD,Grant SG

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J

Evolutionary comparison reveals that diverging CTCF sites are signatures of ancestral topological associating domains borders.
Proceedings of the National Academy of Sciences of the United States of America112(24)7542-7(2015 Jun)
G?mez-Mar?n C,Tena JJ,Acemel RD,L?pez-Mayorga M,Naranjo S,de la Calle-Mustienes E,Maeso I,Beccari L,Aneas I,Vielmas E,Bovolenta P,Nobrega MA,Carvajal J,G?mez-Skarmeta JL

Comparative analysis of nonaspanin protein sequences and expression studies in zebrafish.
Immunogenetics62(10)681-99(2010 Oct)
Pruvot B,Laurens V,Salvadori F,Solary E,Pichon L,Chluba J

Variation at the NFATC2 locus increases the risk of thiazolidinedione-induced edema in the Diabetes REduction Assessment with ramipril and rosiglitazone Medication (DREAM) study.
Diabetes care33(10)2250-3(2010 Oct)
Bailey SD,Xie C,Do R,Montpetit A,Diaz R,Mohan V,Keavney B,Yusuf S,Gerstein HC,Engert JC,Anand S,