atad1b cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	atad1b
Entrez Gene ID	368412
Full Name	ATPase family, AAA domain containing 1b
Synonyms	atad1,bZ1G13.1,si:bz1g13.1,wu:fc15a10,zgc:110042
General protein information	Preferred Names ATPase family, AAA domain containing 1b Names ATPase family AAA domain-containing protein 1-B bZ1G13.1 (novel protein)
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
XM_017358436.1	XP_017213925.1	ATPase family AAA domain-containing protein 1-B isoform X1
NM_001024421.2	NP_001019592.1	ATPase family AAA domain-containing protein 1-B

Pathways from BioSystems

Homologies

Mus musculus (house mouse)	Atad1	NP_080763.2
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP009625	XP_318657.4
Magnaporthe oryzae (rice blast fungus)	MGG_07075	XP_003715261.1
Arabidopsis thaliana (thale cress)	AT4G27680	NP_194498.1
	ATAD1	XP_001102081.1
Bos taurus (cattle)	ATAD1	NP_001192510.1
Danio rerio (zebrafish)	atad1b	NP_001019592.1
Drosophila melanogaster (fruit fly)	CG4701	NP_609721.1
Drosophila melanogaster (fruit fly)	nmd	NP_609373.1
Schizosaccharomyces pombe (fission yeast)	SPCC24B10.10c	NP_588013.1
Canis lupus familiaris (dog)	ATAD1	XP_534778.3
Gallus gallus (chicken)	ATAD1	XP_004942050.1
Saccharomyces cerevisiae (baker's yeast)	MSP1	NP_011542.3
Arabidopsis thaliana (thale cress)	AT5G53540	NP_200166.1
Xenopus tropicalis (tropical clawed frog)	atad1	NP_001135501.1
Rattus norvegicus (Norway rat)	Atad1	NP_001030174.1
Oryza sativa (rice)	Os06g0714500	NP_001058575.1
Homo sapiens (human)	ATAD1	NP_116199.2
Pan troglodytes (chimpanzee)	ATAD1	XP_001138404.1
Kluyveromyces lactis	KLLA0B06094g	XP_451808.1
Eremothecium gossypii	AGOS_ABR036W	NP_982982.2
Neurospora crassa	NCU07988	XP_962658.1

Gene Ontology
Bibliography

Related articles in PubMed

Evolution of complexity in the zebrafish synapse proteome.
Bay?s ?, Collins MO, Reig-Viader R, Gou G, Goulding D, Izquierdo A, Choudhary JS, Emes RD, Grant SG
Nature communications814613(2017 Mar)

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following atad1b gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the atad1b cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa00184	NM_001024421.2 Latest version!	Danio rerio ATPase family AAA domain containing 1b (atad1b), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00
ODa54443	XM_017358436.1 Latest version!	Danio rerio ATPase family, AAA domain containing 1b (atad1b), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

atad1b ( NM_001024421.2 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001019592.1 Danio rerio ATPase family AAA domain containing 1b (atad1b), mRNA.

Price & Availability↑

CloneID	ODa00184
Clone ID Related Accession (Same CDS sequence)	NM_001024421.2
Accession Version	NM_001024421.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1089bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-07
Organism	Danio rerio(zebrafish)
Product	ATPase family AAA domain-containing protein 1-B
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC095151.1. On Aug 31, 2012 this sequence version replaced NM_001024421.1. ##Evidence-Data-START## Transcript exon combination :: BC095151.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END##

ATGGTTTTGA AAGAAATTCC CACAGAAAAC ATAACTCGCC CTTTGGGCCG GAATGAGGTC 
ATAGGTTTAC TCTTCCGTCT CACAATATTT GGCGCTGTCA CCTATTTTAC AATAAAGTGG 
ATGGTTGATG CTATCGATCC AACAAGGAAA CAAAAGGTTG AGGCACAAAA ACAGGCAGAG 
AAACTCATGC GGCAAATTGG AGTGCAGAAT GTGAAGCTTT CTGAATATGA GATGAGCATT 
GCAGCTCATC TTGTGGATCC GTTGACAATG CAGATTACAT GGTATGACAT TGCTGGTCTG 
GATGAAGTCA TTACTGAACT GAAAGACACC GTTATACTTC CAATCCAGAA AAGGCATCTG 
TTTGAAGGAT CCAGACTTCT TCAGCCACCC AAAGGTGTGT TGCTGTATGG GCCTCCAGGC 
TGTGGGAAAA CTCTCATAGC CAAAGCTACT GCCAAAGAGG CTGGTTTCCG TTTCATCAAC 
CTGCAGCCAT CCACTCTCAC AGACAAATGG TACGGAGAGT CCCAGAAACT GGCTGCAGCC 
GTGTTTTCAC TGGCCATCAA GCTACAGCCC TCCATTATCT TCATCGATGA GATTGATTCC 
TTTTTAAGGA ATCGCTCAAG TTCAGATCAT GAAGCCACGG CTATGATGAA GGCTCAGTTC 
ATGAGCTTAT GGGACGGCCT CGATACTGAC TACAACTGCC AGGTCATAAT AATGGGAGCC 
ACCAATCGGC CACAAGATCT CGATTCTGCT ATTCTCCGAA GGATGCCTAC AAGATTCCAC 
ATCAATCAGC CTAATGCCAG GCAGAGGAAG GACATCCTGA AGCTGATCTT GGAGAATGAG 
AACGTGGAGT CCGCTGTGGA ATTAAGTGAA ATTGCAAAGC AGACTGATGG GTTTTCTGGA 
AGTGACCTTA GAGAGATGTG CCGAGATGCT GCTCTTCTGT GTGTGCGTGA CTTTGTTCAC 
CAAGAAAGTC CAGAGGAAGA CTTCATCCGT CCCATCAGGC AGGAAGACTT GCAGAGGGCA 
ATCGAGAAAA TGAAGAAGTC CAAATCTGCA GGAGTGCATG AGGCATTTAT GCAAGTACCA 
CTGGACTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001019592.1
CDS	169..1257
Translation	MVLKEIPTENITRPLGRNEVIGLLFRLTIFGAVTYFTIKWMVDAIDPTRKQKVEAQKQAEKLMRQIGVQNVKLSEYEMSIAAHLVDPLTMQITWYDIAGLDEVITELKDTVILPIQKRHLFEGSRLLQPPKGVLLYGPPGCGKTLIAKATAKEAGFRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDSFLRNRSSSDHEATAMMKAQFMSLWDGLDTDYNCQVIIMGATNRPQDLDSAILRRMPTRFHINQPNARQRKDILKLILENENVESAVELSEIAKQTDGFSGSDLREMCRDAALLCVRDFVHQESPEEDFIRPIRQEDLQRAIEKMKKSKSAGVHEAFMQVPLD

Target ORF information:

RefSeq Version	NM_001024421.2
Organism	Danio rerio(zebrafish)
Definition	Danio rerio ATPase family AAA domain containing 1b (atad1b), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001024421.2

ORF Insert Sequence:

ATGGTTTTGA AAGAAATTCC CACAGAAAAC ATAACTCGCC CTTTGGGCCG GAATGAGGTC 
ATAGGTTTAC TCTTCCGTCT CACAATATTT GGCGCTGTCA CCTATTTTAC AATAAAGTGG 
ATGGTTGATG CTATCGATCC AACAAGGAAA CAAAAGGTTG AGGCACAAAA ACAGGCAGAG 
AAACTCATGC GGCAAATTGG AGTGCAGAAT GTGAAGCTTT CTGAATATGA GATGAGCATT 
GCAGCTCATC TTGTGGATCC GTTGACAATG CAGATTACAT GGTATGACAT TGCTGGTCTG 
GATGAAGTCA TTACTGAACT GAAAGACACC GTTATACTTC CAATCCAGAA AAGGCATCTG 
TTTGAAGGAT CCAGACTTCT TCAGCCACCC AAAGGTGTGT TGCTGTATGG GCCTCCAGGC 
TGTGGGAAAA CTCTCATAGC CAAAGCTACT GCCAAAGAGG CTGGTTTCCG TTTCATCAAC 
CTGCAGCCAT CCACTCTCAC AGACAAATGG TACGGAGAGT CCCAGAAACT GGCTGCAGCC 
GTGTTTTCAC TGGCCATCAA GCTACAGCCC TCCATTATCT TCATCGATGA GATTGATTCC 
TTTTTAAGGA ATCGCTCAAG TTCAGATCAT GAAGCCACGG CTATGATGAA GGCTCAGTTC 
ATGAGCTTAT GGGACGGCCT CGATACTGAC TACAACTGCC AGGTCATAAT AATGGGAGCC 
ACCAATCGGC CACAAGATCT CGATTCTGCT ATTCTCCGAA GGATGCCTAC AAGATTCCAC 
ATCAATCAGC CTAATGCCAG GCAGAGGAAG GACATCCTGA AGCTGATCTT GGAGAATGAG 
AACGTGGAGT CCGCTGTGGA ATTAAGTGAA ATTGCAAAGC AGACTGATGG GTTTTCTGGA 
AGTGACCTTA GAGAGATGTG CCGAGATGCT GCTCTTCTGT GTGTGCGTGA CTTTGTTCAC 
CAAGAAAGTC CAGAGGAAGA CTTCATCCGT CCCATCAGGC AGGAAGACTT GCAGAGGGCA 
ATCGAGAAAA TGAAGAAGTC CAAATCTGCA GGAGTGCATG AGGCATTTAT GCAAGTACCA 
CTGGACTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

atad1b ( XM_017358436.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_017213925.1 Danio rerio ATPase family, AAA domain containing 1b (atad1b), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ODa54443
Clone ID Related Accession (Same CDS sequence)	XM_017358436.1
Accession Version	XM_017358436.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1089bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-06-23
Organism	Danio rerio(Zebrafish)
Product	ATPase family AAA domain-containing protein 1-B isoform X1
Comment	MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007123.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGTTTTGA AAGAAATTCC CACAGAAAAC ATAACTCGCC CTTTGGGCCG GAATGAGGTC 
ATAGGTTTAC TCTTCCGTCT CACAATATTT GGCGCTGTCA CCTATTTTAC AATAAAGTGG 
ATGGTTGATG CTATCGATCC AACAAGAAAA CAAAAGGTTG AGGCACAAAA ACAGGCAGAG 
AAACTCATGC GGCAAATTGG AGTGCAGAAT GTGAAGCTTT CTGAATATGA GATGAGCATT 
GCAGCTCATC TTGTGGATCC GTTGACAATG CAGATTACAT GGCATGACAT TGCTGGTCTG 
GATGAAGTCA TTACTGAACT GAAAGACACC GTTATACTTC CAATCCAGAA AAGGCATCTG 
TTTGAAGGAT CCAGACTTCT TCAGCCACCC AAAGGTGTGT TGCTGTATGG GCCTCCAGGC 
TGTGGGAAAA CTCTCATAGC CAAAGCTACT GCCAAAGAGG CTGGTTTCCG TTTCATCAAC 
CTGCAGCCAT CCACTCTCAC AGACAAATGG TACGGAGAGT CCCAGAAACT GGCTGCAGCC 
GTGTTTTCAC TGGCCATCAA GCTACAGCCC TCCATTATCT TCATCGATGA GATTGATTCC 
TTTTTAAGGA ATCGCTCAAG TTCAGATCAT GAAGCCACGG CTATGATGAA GGCTCAGTTC 
ATGAGCTTAT GGGACGGCCT CGATACTGAC TACAACTGCC AGGTCATAAT AATGGGAGCC 
ACCAATCGGC CACAAGATCT CGATTCTGCT ATTCTCCGAA GGATGCCTAC AAGATTCCAC 
ATCAATCAGC CTAATGTCAG GCAGAGGAAG GACATCCTGA AGCTGATCTT GGAGAATGAG 
AACGTGGAGT CCGCTGTGGA ATTAAGTGAA ATTGCAAAGC AGACTGATGG GTTTTCTGGA 
AGTGACCTTA GAGAGATGTG CCGAGATGCT GCTCTTCTGT GTGTGCGTGA CTTTGTTCAC 
CAAGAAAGTC CAGAGGAAGA CTTCATCCGT CCCATCAGGC AGGAAGACTT GCAGAGGGCA 
ATCGAGAAAA TGAAGAAGTC CAAATCTGCA GGAGTGCATG AGGCATTTAT GCAAGTACCA 
CTGGACTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_017213925.1
CDS	451..1539
Translation	MVLKEIPTENITRPLGRNEVIGLLFRLTIFGAVTYFTIKWMVDAIDPTRKQKVEAQKQAEKLMRQIGVQNVKLSEYEMSIAAHLVDPLTMQITWHDIAGLDEVITELKDTVILPIQKRHLFEGSRLLQPPKGVLLYGPPGCGKTLIAKATAKEAGFRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDSFLRNRSSSDHEATAMMKAQFMSLWDGLDTDYNCQVIIMGATNRPQDLDSAILRRMPTRFHINQPNVRQRKDILKLILENENVESAVELSEIAKQTDGFSGSDLREMCRDAALLCVRDFVHQESPEEDFIRPIRQEDLQRAIEKMKKSKSAGVHEAFMQVPLD

Target ORF information:

RefSeq Version	XM_017358436.1
Organism	Danio rerio(Zebrafish)
Definition	Danio rerio ATPase family, AAA domain containing 1b (atad1b), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_017358436.1

ORF Insert Sequence:

ATGGTTTTGA AAGAAATTCC CACAGAAAAC ATAACTCGCC CTTTGGGCCG GAATGAGGTC 
ATAGGTTTAC TCTTCCGTCT CACAATATTT GGCGCTGTCA CCTATTTTAC AATAAAGTGG 
ATGGTTGATG CTATCGATCC AACAAGAAAA CAAAAGGTTG AGGCACAAAA ACAGGCAGAG 
AAACTCATGC GGCAAATTGG AGTGCAGAAT GTGAAGCTTT CTGAATATGA GATGAGCATT 
GCAGCTCATC TTGTGGATCC GTTGACAATG CAGATTACAT GGCATGACAT TGCTGGTCTG 
GATGAAGTCA TTACTGAACT GAAAGACACC GTTATACTTC CAATCCAGAA AAGGCATCTG 
TTTGAAGGAT CCAGACTTCT TCAGCCACCC AAAGGTGTGT TGCTGTATGG GCCTCCAGGC 
TGTGGGAAAA CTCTCATAGC CAAAGCTACT GCCAAAGAGG CTGGTTTCCG TTTCATCAAC 
CTGCAGCCAT CCACTCTCAC AGACAAATGG TACGGAGAGT CCCAGAAACT GGCTGCAGCC 
GTGTTTTCAC TGGCCATCAA GCTACAGCCC TCCATTATCT TCATCGATGA GATTGATTCC 
TTTTTAAGGA ATCGCTCAAG TTCAGATCAT GAAGCCACGG CTATGATGAA GGCTCAGTTC 
ATGAGCTTAT GGGACGGCCT CGATACTGAC TACAACTGCC AGGTCATAAT AATGGGAGCC 
ACCAATCGGC CACAAGATCT CGATTCTGCT ATTCTCCGAA GGATGCCTAC AAGATTCCAC 
ATCAATCAGC CTAATGTCAG GCAGAGGAAG GACATCCTGA AGCTGATCTT GGAGAATGAG 
AACGTGGAGT CCGCTGTGGA ATTAAGTGAA ATTGCAAAGC AGACTGATGG GTTTTCTGGA 
AGTGACCTTA GAGAGATGTG CCGAGATGCT GCTCTTCTGT GTGTGCGTGA CTTTGTTCAC 
CAAGAAAGTC CAGAGGAAGA CTTCATCCGT CCCATCAGGC AGGAAGACTT GCAGAGGGCA 
ATCGAGAAAA TGAAGAAGTC CAAATCTGCA GGAGTGCATG AGGCATTTAT GCAAGTACCA 
CTGGACTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Evolution of complexity in the zebrafish synapse proteome.
Nature communications814613(2017 Mar)
Bay?s ?,Collins MO,Reig-Viader R,Gou G,Goulding D,Izquierdo A,Choudhary JS,Emes RD,Grant SG

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

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atad1b cDNA ORF clone, Danio rerio(zebrafish)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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