bsg cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	bsg
Entrez Gene ID	337692
Full Name	basigin
Synonyms	wu:fb26a05,wu:fo98e12
General protein information	Preferred Names basigin Names basigin 5A11/Basigin-2 cd147
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001312882.1	NP_001299811.1	basigin isoform 2 precursor
NM_198142.2	NP_937785.2	basigin isoform 1 precursor
XM_009296228.2	XP_009294503.1	basigin isoform X1
XM_009296228.3	XP_009294503.1	basigin isoform X1

Pathways from BioSystems

Homologies

	BSG	XP_001117081.2
Pan troglodytes (chimpanzee)	BSG	XP_003954432.1
Rattus norvegicus (Norway rat)	Bsg	NP_001103352.1
Homo sapiens (human)	BSG	NP_001719.2
Danio rerio (zebrafish)	bsg	NP_937785.1
Mus musculus (house mouse)	Bsg	NP_033898.1
Gallus gallus (chicken)	BSG	NP_001185919.1

Gene Ontology
Bibliography

Related articles in PubMed

Evolution of complexity in the zebrafish synapse proteome.
Bay?s ?, Collins MO, Reig-Viader R, Gou G, Goulding D, Izquierdo A, Choudhary JS, Emes RD, Grant SG
Nature communications814613(2017 Mar)

Immunomodulatory drugs disrupt the cereblon-CD147-MCT1 axis to exert antitumor activity and teratogenicity.
Eichner R, Heider M, Fern?ndez-S?iz V, van Bebber F, Garz AK, Lemeer S, Rudelius M, Targosz BS, Jacobs L, Knorn AM, Slawska J, Platzbecker U, Germing U, Langer C, Knop S, Einsele H, Peschel C, Haass C, Keller U, Schmid B, G?tze KS, Kuster B, Bassermann F
Nature medicine22(7)735-43(2016 07)

Phenotype anchoring in zebrafish reveals a potential role for matrix metalloproteinases (MMPs) in tamoxifen's effects on skin epithelium.
Bugel SM, Wehmas LC, La Du JK, Tanguay RL
Toxicology and applied pharmacology29631-41(2016 Apr)

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

Novel Genes Critical for Hypoxic Preconditioning in Zebrafish Are Regulators of Insulin and Glucose Metabolism.
Manchenkov T, Pasillas MP, Haddad GG, Imam FB
G3 (Bethesda, Md.)5(6)1107-16(2015 Apr)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following bsg gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the bsg cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
ODa26851	NM_001312882.1 Latest version!	Danio rerio basigin (bsg), transcript variant 2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00
ODa40128	NM_198142.2 Latest version!	Danio rerio basigin (bsg), transcript variant 1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00
ODa40129	XM_009296228.3 Latest version!	Danio rerio basigin (bsg), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00
View Old Accession Versions >>
ODa40129	XM_009296228.2	Danio rerio basigin (bsg), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00
Hide Old Accession Versions >>

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

bsg ( NM_001312882.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001299811.1 Danio rerio basigin (bsg), transcript variant 2, mRNA.

Price & Availability↑

CloneID	ODa26851
Clone ID Related Accession (Same CDS sequence)	NM_001312882.1
Accession Version	NM_001312882.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 828bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-01-26
Organism	Danio rerio(zebrafish)
Product	basigin isoform 2 precursor
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BX664631.6, DT058336.1, EH536274.1, EH563077.1 and EH520368.1. On Aug 20, 2015 this sequence version replaced XM_005170439.2. Transcript Variant: This variant (2) lacks an alternate in-frame exon in the 5' coding region compared to variant 1. It encodes isoform 2, which is shorter than isoform 1. ##Evidence-Data-START## Transcript exon combination :: GDQH01001083.1, GFIL01002157.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END##

ATGGAAAAGA AGCTCTTTGG CGCTGTTTTG GTCATTTGTA TCGGCTGGTT TCAAGCCGAA 
GCTATGACAG GTGCAACCAT CATGACTAGT CCCGAGGTGA ACAATGCGAC CTCGGCAACT 
CTGAGCTGCA ACCTGACCAA CCCTTCTTCT CCAATCAAAG GCCACTATTG GGTCAAGAAT 
GGAAAGAAAA TCGAAGAATC GTATTCGACA AATACAGACT CCTATGCTGA ACACTTCATT 
GAAAAAGCTG ATTATCATCA TTCCGGAATA TATACCTGTG TCTTCCTAAC AGAACCTCAG 
GCCAATGCCA CAATTGAAGT TAAAGCTTTG CCGCACATAA AAGCTTCCAA AAGCTCAGAG 
AACGCTAATG AGAAAGACAA GGCTGTGCTG AGCTGTGGAA GTCAAGGATA CCCATCCCCT 
ACTGACTGGA GCTGGTTCAA GCTTCCTGAT GCAGGAGAAC GGACCCCCAT CTTTAATGGC 
ACTGATGATA AGTATGAGAT CAAGAGCACC CCCAACAAGA CCACACTGTA TGTCAAAGAC 
CTGGACATCA ACGAGGACAT GGGCTTCTAC CAGTGTCAAG GCACCAGTGA GGTTGGCACT 
GGTACAGACG ACATCCAGCT GCGTGTGCGG AGTCAGCTGG CCGCTCTCTG GCCTTTCCTC 
GGGATCGTGG CTGAGGTCAT CATCCTCATC ACCATCATCT TCGTCTACGA GAAGAGAAGA 
AAGCCTGATG AGATCAATGA CGATGATGAC TCAGGATCTG CTCCCCTGAA GAGCAACTCC 
GCTACAAACC ACAAAGACAA AAATGTCCGG CAAAGAAACT CCAACTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001299811.1
CDS	162..989
Translation	MEKKLFGAVLVICIGWFQAEAMTGATIMTSPEVNNATSATLSCNLTNPSSPIKGHYWVKNGKKIEESYSTNTDSYAEHFIEKADYHHSGIYTCVFLTEPQANATIEVKALPHIKASKSSENANEKDKAVLSCGSQGYPSPTDWSWFKLPDAGERTPIFNGTDDKYEIKSTPNKTTLYVKDLDINEDMGFYQCQGTSEVGTGTDDIQLRVRSQLAALWPFLGIVAEVIILITIIFVYEKRRKPDEINDDDDSGSAPLKSNSATNHKDKNVRQRNSN

Target ORF information:

RefSeq Version	NM_001312882.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio basigin (bsg), transcript variant 2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001312882.1

ORF Insert Sequence:

ATGGAAAAGA AGCTCTTTGG CGCTGTTTTG GTCATTTGTA TCGGCTGGTT TCAAGCCGAA 
GCTATGACAG GTGCAACCAT CATGACTAGT CCCGAGGTGA ACAATGCGAC CTCGGCAACT 
CTGAGCTGCA ACCTGACCAA CCCTTCTTCT CCAATCAAAG GCCACTATTG GGTCAAGAAT 
GGAAAGAAAA TCGAAGAATC GTATTCGACA AATACAGACT CCTATGCTGA ACACTTCATT 
GAAAAAGCTG ATTATCATCA TTCCGGAATA TATACCTGTG TCTTCCTAAC AGAACCTCAG 
GCCAATGCCA CAATTGAAGT TAAAGCTTTG CCGCACATAA AAGCTTCCAA AAGCTCAGAG 
AACGCTAATG AGAAAGACAA GGCTGTGCTG AGCTGTGGAA GTCAAGGATA CCCATCCCCT 
ACTGACTGGA GCTGGTTCAA GCTTCCTGAT GCAGGAGAAC GGACCCCCAT CTTTAATGGC 
ACTGATGATA AGTATGAGAT CAAGAGCACC CCCAACAAGA CCACACTGTA TGTCAAAGAC 
CTGGACATCA ACGAGGACAT GGGCTTCTAC CAGTGTCAAG GCACCAGTGA GGTTGGCACT 
GGTACAGACG ACATCCAGCT GCGTGTGCGG AGTCAGCTGG CCGCTCTCTG GCCTTTCCTC 
GGGATCGTGG CTGAGGTCAT CATCCTCATC ACCATCATCT TCGTCTACGA GAAGAGAAGA 
AAGCCTGATG AGATCAATGA CGATGATGAC TCAGGATCTG CTCCCCTGAA GAGCAACTCC 
GCTACAAACC ACAAAGACAA AAATGTCCGG CAAAGAAACT CCAACTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

bsg ( NM_198142.2 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_937785.2 Danio rerio basigin (bsg), transcript variant 1, mRNA.

Price & Availability↑

CloneID	ODa40128
Clone ID Related Accession (Same CDS sequence)	NM_198142.2
Accession Version	NM_198142.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1179bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-01-26
Organism	Danio rerio(zebrafish)
Product	basigin isoform 1 precursor
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BX664631.6, DT058336.1, EH536274.1, CK356411.1, EH563077.1 and EH520368.1. On Aug 20, 2015 this sequence version replaced NM_198142.1. Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1). ##Evidence-Data-START## Transcript exon combination :: AY155495.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA3505370 [ECO:0000348] ##Evidence-Data-END##

ATGGAAAAGA AGCTCTTTGG CGCTGTTTTG GTCATTTGTA TCGGCTGGTT TCAAGCCGAA 
GCTATGACAG CGGGCTTCAT AAAATCGCCT TTGTCTCAGA TGAAACTCAT TGAAGACAAT 
GCAGAGCTGG ATTGCGAGGT CATAGGGAAT CCCATCCCTG AAGTTCAGTG GTGGTTTATT 
GAGGGCGAGG AGCCAGATGA AATCATCACT CAGCTGTTTG ATGGTGCAAG AGAGGATCGC 
GTTCACATCA ACGCCACCTA TATTGACCAC GCCACCAGCT CGCTCATCCT CACCAACCTA 
ACGTTCAACG ACACAGGCGT TTATGAGTGC CGTGCCTCAA ACGACCCCGA CCGCAACGAC 
CTCAGGACCC CGCCAAAAGT CAAGTGGATT CGCTCACAAG CGAACGTTAT AGTGTTTGAA 
CGTGCAACCA TCATGACTAG TCCCGAGGTG AACAATGCGA CCTCGGCAAC TCTGAGCTGC 
AACCTGACCA ACCCTTCTTC TCCAATCAAA GGCCACTATT GGGTCAAGAA TGGAAAGAAA 
ATCGAAGAAT CGTATTCGAC AAATACAGAC TCCTATGCTG AACACTTCAT TGAAAAAGCT 
GATTATCATC ATTCCGGAAT ATATACCTGT GTCTTCCTAA CAGAACCTCA GGCCAATGCC 
ACAATTGAAG TTAAAGCTTT GCCGCACATA AAAGCTTCCA AAAGCTCAGA GAACGCTAAT 
GAGAAAGACA AGGCTGTGCT GAGCTGTGGA AGTCAAGGAT ACCCATCCCC TACTGACTGG 
AGCTGGTTCA AGCTTCCTGA TGCAGGAGAA CGGACCCCCA TCTTTAATGG CACTGATGAT 
AAGTATGAGA TCAAGAGCAC CCCCAACAAG ACCACACTGT ATGTCAAAGA CCTGGACATC 
AACGAGGACA TGGGCTTCTA CCAGTGTCAA GGCACCAGTG AGGTTGGCAC TGGTACAGAC 
GACATCCAGC TGCGTGTGCG GAGTCAGCTG GCCGCTCTCT GGCCTTTCCT CGGGATCGTG 
GCTGAGGTCA TCATCCTCAT CACCATCATC TTCGTCTACG AGAAGAGAAG AAAGCCTGAT 
GAGATCAATG ACGATGATGA CTCAGGATCT GCTCCCCTGA AGAGCAACTC CGCTACAAAC 
CACAAAGACA AAAATGTCCG GCAAAGAAAC TCCAACTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_937785.2
CDS	162..1340
Translation	MEKKLFGAVLVICIGWFQAEAMTAGFIKSPLSQMKLIEDNAELDCEVIGNPIPEVQWWFIEGEEPDEIITQLFDGAREDRVHINATYIDHATSSLILTNLTFNDTGVYECRASNDPDRNDLRTPPKVKWIRSQANVIVFERATIMTSPEVNNATSATLSCNLTNPSSPIKGHYWVKNGKKIEESYSTNTDSYAEHFIEKADYHHSGIYTCVFLTEPQANATIEVKALPHIKASKSSENANEKDKAVLSCGSQGYPSPTDWSWFKLPDAGERTPIFNGTDDKYEIKSTPNKTTLYVKDLDINEDMGFYQCQGTSEVGTGTDDIQLRVRSQLAALWPFLGIVAEVIILITIIFVYEKRRKPDEINDDDDSGSAPLKSNSATNHKDKNVRQRNSN

Target ORF information:

RefSeq Version	NM_198142.2
Organism	Danio rerio(zebrafish)
Definition	Danio rerio basigin (bsg), transcript variant 1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_198142.2

ORF Insert Sequence:

ATGGAAAAGA AGCTCTTTGG CGCTGTTTTG GTCATTTGTA TCGGCTGGTT TCAAGCCGAA 
GCTATGACAG CGGGCTTCAT AAAATCGCCT TTGTCTCAGA TGAAACTCAT TGAAGACAAT 
GCAGAGCTGG ATTGCGAGGT CATAGGGAAT CCCATCCCTG AAGTTCAGTG GTGGTTTATT 
GAGGGCGAGG AGCCAGATGA AATCATCACT CAGCTGTTTG ATGGTGCAAG AGAGGATCGC 
GTTCACATCA ACGCCACCTA TATTGACCAC GCCACCAGCT CGCTCATCCT CACCAACCTA 
ACGTTCAACG ACACAGGCGT TTATGAGTGC CGTGCCTCAA ACGACCCCGA CCGCAACGAC 
CTCAGGACCC CGCCAAAAGT CAAGTGGATT CGCTCACAAG CGAACGTTAT AGTGTTTGAA 
CGTGCAACCA TCATGACTAG TCCCGAGGTG AACAATGCGA CCTCGGCAAC TCTGAGCTGC 
AACCTGACCA ACCCTTCTTC TCCAATCAAA GGCCACTATT GGGTCAAGAA TGGAAAGAAA 
ATCGAAGAAT CGTATTCGAC AAATACAGAC TCCTATGCTG AACACTTCAT TGAAAAAGCT 
GATTATCATC ATTCCGGAAT ATATACCTGT GTCTTCCTAA CAGAACCTCA GGCCAATGCC 
ACAATTGAAG TTAAAGCTTT GCCGCACATA AAAGCTTCCA AAAGCTCAGA GAACGCTAAT 
GAGAAAGACA AGGCTGTGCT GAGCTGTGGA AGTCAAGGAT ACCCATCCCC TACTGACTGG 
AGCTGGTTCA AGCTTCCTGA TGCAGGAGAA CGGACCCCCA TCTTTAATGG CACTGATGAT 
AAGTATGAGA TCAAGAGCAC CCCCAACAAG ACCACACTGT ATGTCAAAGA CCTGGACATC 
AACGAGGACA TGGGCTTCTA CCAGTGTCAA GGCACCAGTG AGGTTGGCAC TGGTACAGAC 
GACATCCAGC TGCGTGTGCG GAGTCAGCTG GCCGCTCTCT GGCCTTTCCT CGGGATCGTG 
GCTGAGGTCA TCATCCTCAT CACCATCATC TTCGTCTACG AGAAGAGAAG AAAGCCTGAT 
GAGATCAATG ACGATGATGA CTCAGGATCT GCTCCCCTGA AGAGCAACTC CGCTACAAAC 
CACAAAGACA AAAATGTCCG GCAAAGAAAC TCCAACTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

bsg ( XM_009296228.2 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_009294503.1 Danio rerio basigin (bsg), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ODa40129
Clone ID Related Accession (Same CDS sequence)	XM_009296228.2 , XM_009296228.3
Accession Version	XM_009296228.2	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1167bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-06-23
Organism	Danio rerio(Zebrafish)
Product	basigin isoform X1
Comment	MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007133.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_009296228.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGAAAAGA AGCTCTTTGG CGCTGTTTTG GTCATTTGTA TCGGCTGGTT TCAAGCCGAA 
GCTATGACAG CGGGCTTCAT AAAATCGCCT TTGTCTCAGA TGAAACTCAT TGAAGACAAT 
GCAGAGCTGG ATTGCGAGGT CATAGGGAAT CCCATCCCTG AAGTTCAGTG GTGGTTTATT 
GAGGGCGAGG AGCCAGATGA AATCATCACT CAGCTGTTTG ATGGTGCAAG AGAGGATCGC 
GTTCACATCA ACGCCACCTA TATTGACCAC GCCACCAGCT CGCTCATCCT CACCAACCTA 
ACGTTCAACG ACACAGGCGT TTATGAGTGC CGTGCCTCAA ACGACCCCGA CCGCAACGAC 
CTCAGGACCC CGCCAAAAGT CAAGTGGATT CGCTCACAAG CGAACGTTAT AGTGTTTGAA 
CGTGCAACCA TCATGACTAG TCCCGAGGTG AACAATGCGA CCTCGGCAAC TCTGAGCTGC 
AACCTGACCA ACCCTTCTTC TCCAATCAAA GGCCACTATT GGGTCAAGAA TGGAAAGAAA 
ATCGAAGAAT CGTATTCGAC AAATACAGAC TCCTATGCTG AACACTTCAT TGAAAAAGCT 
GATTATCATC ATTCCGGAAT ATATACCTGT GTCTTCCTAA CAGAACCTCA GGCCAATGCC 
ACAATTGAAG TTAAAGCTTT GCCGCACATA AAAGCTTCCA AAAGCTCAGA GAACGCTAAT 
GAGAAAGACA AGGCTGTGCT GAGCTGTGGA AGTCAAGGAT ACCCATCCCC TACTGACTGG 
AGCTGGTTCA AGCTTCCTGA TGCAGGAGAA CGGACCCCCA TCTTTAATGG CACTGATGAT 
AAGTATGAGA TCAAGAGCAC CCCCAACAAG ACCACACTGT ATGTCAAAGA CCTGGACATC 
AACGAGGACA TGGGCTTCTA CCAGTGTCAA GGCACCAGTG AGGTTGGCAC TGGTACAGAC 
GACATCCAGC TGCGTGTGCG GAGTCAGCTG GCCGCTCTCT GGCCTTTCCT CGGGATCGTG 
GCTGAGGTCA TCATCCTCAT CACCATCATC TTCGTCTACG AGAAGAGAAG AAAGCCTGAT 
GAGATCAATG ACGGATCTGC TCCCCTGAAG AGCAACTCCG CTACAAACCA CAAAGACAAA 
AATGTCCGGC AAAGAAACTC CAACTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_009294503.1
CDS	154..1320
Translation	MEKKLFGAVLVICIGWFQAEAMTAGFIKSPLSQMKLIEDNAELDCEVIGNPIPEVQWWFIEGEEPDEIITQLFDGAREDRVHINATYIDHATSSLILTNLTFNDTGVYECRASNDPDRNDLRTPPKVKWIRSQANVIVFERATIMTSPEVNNATSATLSCNLTNPSSPIKGHYWVKNGKKIEESYSTNTDSYAEHFIEKADYHHSGIYTCVFLTEPQANATIEVKALPHIKASKSSENANEKDKAVLSCGSQGYPSPTDWSWFKLPDAGERTPIFNGTDDKYEIKSTPNKTTLYVKDLDINEDMGFYQCQGTSEVGTGTDDIQLRVRSQLAALWPFLGIVAEVIILITIIFVYEKRRKPDEINDGSAPLKSNSATNHKDKNVRQRNSN

Target ORF information:

RefSeq Version	XM_009296228.2
Organism	Danio rerio(Zebrafish)
Definition	Danio rerio basigin (bsg), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_009296228.2

ORF Insert Sequence:

ATGGAAAAGA AGCTCTTTGG CGCTGTTTTG GTCATTTGTA TCGGCTGGTT TCAAGCCGAA 
GCTATGACAG CGGGCTTCAT AAAATCGCCT TTGTCTCAGA TGAAACTCAT TGAAGACAAT 
GCAGAGCTGG ATTGCGAGGT CATAGGGAAT CCCATCCCTG AAGTTCAGTG GTGGTTTATT 
GAGGGCGAGG AGCCAGATGA AATCATCACT CAGCTGTTTG ATGGTGCAAG AGAGGATCGC 
GTTCACATCA ACGCCACCTA TATTGACCAC GCCACCAGCT CGCTCATCCT CACCAACCTA 
ACGTTCAACG ACACAGGCGT TTATGAGTGC CGTGCCTCAA ACGACCCCGA CCGCAACGAC 
CTCAGGACCC CGCCAAAAGT CAAGTGGATT CGCTCACAAG CGAACGTTAT AGTGTTTGAA 
CGTGCAACCA TCATGACTAG TCCCGAGGTG AACAATGCGA CCTCGGCAAC TCTGAGCTGC 
AACCTGACCA ACCCTTCTTC TCCAATCAAA GGCCACTATT GGGTCAAGAA TGGAAAGAAA 
ATCGAAGAAT CGTATTCGAC AAATACAGAC TCCTATGCTG AACACTTCAT TGAAAAAGCT 
GATTATCATC ATTCCGGAAT ATATACCTGT GTCTTCCTAA CAGAACCTCA GGCCAATGCC 
ACAATTGAAG TTAAAGCTTT GCCGCACATA AAAGCTTCCA AAAGCTCAGA GAACGCTAAT 
GAGAAAGACA AGGCTGTGCT GAGCTGTGGA AGTCAAGGAT ACCCATCCCC TACTGACTGG 
AGCTGGTTCA AGCTTCCTGA TGCAGGAGAA CGGACCCCCA TCTTTAATGG CACTGATGAT 
AAGTATGAGA TCAAGAGCAC CCCCAACAAG ACCACACTGT ATGTCAAAGA CCTGGACATC 
AACGAGGACA TGGGCTTCTA CCAGTGTCAA GGCACCAGTG AGGTTGGCAC TGGTACAGAC 
GACATCCAGC TGCGTGTGCG GAGTCAGCTG GCCGCTCTCT GGCCTTTCCT CGGGATCGTG 
GCTGAGGTCA TCATCCTCAT CACCATCATC TTCGTCTACG AGAAGAGAAG AAAGCCTGAT 
GAGATCAATG ACGGATCTGC TCCCCTGAAG AGCAACTCCG CTACAAACCA CAAAGACAAA 
AATGTCCGGC AAAGAAACTC CAACTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

bsg ( XM_009296228.3 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_009294503.1 Danio rerio basigin (bsg), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ODa40129
Clone ID Related Accession (Same CDS sequence)	XM_009296228.2 , XM_009296228.3
Accession Version	XM_009296228.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1167bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-06-14
Organism	Danio rerio(zebrafish)
Product	basigin isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007133.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_009296228.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGAAAAGA AGCTCTTTGG CGCTGTTTTG GTCATTTGTA TCGGCTGGTT TCAAGCCGAA 
GCTATGACAG CGGGCTTCAT AAAATCGCCT TTGTCTCAGA TGAAACTCAT TGAAGACAAT 
GCAGAGCTGG ATTGCGAGGT CATAGGGAAT CCCATCCCTG AAGTTCAGTG GTGGTTTATT 
GAGGGCGAGG AGCCAGATGA AATCATCACT CAGCTGTTTG ATGGTGCAAG AGAGGATCGC 
GTTCACATCA ACGCCACCTA TATTGACCAC GCCACCAGCT CGCTCATCCT CACCAACCTA 
ACGTTCAACG ACACAGGCGT TTATGAGTGC CGTGCCTCAA ACGACCCCGA CCGCAACGAC 
CTCAGGACCC CGCCAAAAGT CAAGTGGATT CGCTCACAAG CGAACGTTAT AGTGTTTGAA 
CGTGCAACCA TCATGACTAG TCCCGAGGTG AACAATGCGA CCTCGGCAAC TCTGAGCTGC 
AACCTGACCA ACCCTTCTTC TCCAATCAAA GGCCACTATT GGGTCAAGAA TGGAAAGAAA 
ATCGAAGAAT CGTATTCGAC AAATACAGAC TCCTATGCTG AACACTTCAT TGAAAAAGCT 
GATTATCATC ATTCCGGAAT ATATACCTGT GTCTTCCTAA CAGAACCTCA GGCCAATGCC 
ACAATTGAAG TTAAAGCTTT GCCGCACATA AAAGCTTCCA AAAGCTCAGA GAACGCTAAT 
GAGAAAGACA AGGCTGTGCT GAGCTGTGGA AGTCAAGGAT ACCCATCCCC TACTGACTGG 
AGCTGGTTCA AGCTTCCTGA TGCAGGAGAA CGGACCCCCA TCTTTAATGG CACTGATGAT 
AAGTATGAGA TCAAGAGCAC CCCCAACAAG ACCACACTGT ATGTCAAAGA CCTGGACATC 
AACGAGGACA TGGGCTTCTA CCAGTGTCAA GGCACCAGTG AGGTTGGCAC TGGTACAGAC 
GACATCCAGC TGCGTGTGCG GAGTCAGCTG GCCGCTCTCT GGCCTTTCCT CGGGATCGTG 
GCTGAGGTCA TCATCCTCAT CACCATCATC TTCGTCTACG AGAAGAGAAG AAAGCCTGAT 
GAGATCAATG ACGGATCTGC TCCCCTGAAG AGCAACTCCG CTACAAACCA CAAAGACAAA 
AATGTCCGGC AAAGAAACTC CAACTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_009294503.1
CDS	151..1317
Translation	MEKKLFGAVLVICIGWFQAEAMTAGFIKSPLSQMKLIEDNAELDCEVIGNPIPEVQWWFIEGEEPDEIITQLFDGAREDRVHINATYIDHATSSLILTNLTFNDTGVYECRASNDPDRNDLRTPPKVKWIRSQANVIVFERATIMTSPEVNNATSATLSCNLTNPSSPIKGHYWVKNGKKIEESYSTNTDSYAEHFIEKADYHHSGIYTCVFLTEPQANATIEVKALPHIKASKSSENANEKDKAVLSCGSQGYPSPTDWSWFKLPDAGERTPIFNGTDDKYEIKSTPNKTTLYVKDLDINEDMGFYQCQGTSEVGTGTDDIQLRVRSQLAALWPFLGIVAEVIILITIIFVYEKRRKPDEINDGSAPLKSNSATNHKDKNVRQRNSN

Target ORF information:

RefSeq Version	XM_009296228.3
Organism	Danio rerio(zebrafish)
Definition	Danio rerio basigin (bsg), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_009296228.3

ORF Insert Sequence:

ATGGAAAAGA AGCTCTTTGG CGCTGTTTTG GTCATTTGTA TCGGCTGGTT TCAAGCCGAA 
GCTATGACAG CGGGCTTCAT AAAATCGCCT TTGTCTCAGA TGAAACTCAT TGAAGACAAT 
GCAGAGCTGG ATTGCGAGGT CATAGGGAAT CCCATCCCTG AAGTTCAGTG GTGGTTTATT 
GAGGGCGAGG AGCCAGATGA AATCATCACT CAGCTGTTTG ATGGTGCAAG AGAGGATCGC 
GTTCACATCA ACGCCACCTA TATTGACCAC GCCACCAGCT CGCTCATCCT CACCAACCTA 
ACGTTCAACG ACACAGGCGT TTATGAGTGC CGTGCCTCAA ACGACCCCGA CCGCAACGAC 
CTCAGGACCC CGCCAAAAGT CAAGTGGATT CGCTCACAAG CGAACGTTAT AGTGTTTGAA 
CGTGCAACCA TCATGACTAG TCCCGAGGTG AACAATGCGA CCTCGGCAAC TCTGAGCTGC 
AACCTGACCA ACCCTTCTTC TCCAATCAAA GGCCACTATT GGGTCAAGAA TGGAAAGAAA 
ATCGAAGAAT CGTATTCGAC AAATACAGAC TCCTATGCTG AACACTTCAT TGAAAAAGCT 
GATTATCATC ATTCCGGAAT ATATACCTGT GTCTTCCTAA CAGAACCTCA GGCCAATGCC 
ACAATTGAAG TTAAAGCTTT GCCGCACATA AAAGCTTCCA AAAGCTCAGA GAACGCTAAT 
GAGAAAGACA AGGCTGTGCT GAGCTGTGGA AGTCAAGGAT ACCCATCCCC TACTGACTGG 
AGCTGGTTCA AGCTTCCTGA TGCAGGAGAA CGGACCCCCA TCTTTAATGG CACTGATGAT 
AAGTATGAGA TCAAGAGCAC CCCCAACAAG ACCACACTGT ATGTCAAAGA CCTGGACATC 
AACGAGGACA TGGGCTTCTA CCAGTGTCAA GGCACCAGTG AGGTTGGCAC TGGTACAGAC 
GACATCCAGC TGCGTGTGCG GAGTCAGCTG GCCGCTCTCT GGCCTTTCCT CGGGATCGTG 
GCTGAGGTCA TCATCCTCAT CACCATCATC TTCGTCTACG AGAAGAGAAG AAAGCCTGAT 
GAGATCAATG ACGGATCTGC TCCCCTGAAG AGCAACTCCG CTACAAACCA CAAAGACAAA 
AATGTCCGGC AAAGAAACTC CAACTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Evolution of complexity in the zebrafish synapse proteome.
Nature communications814613(2017 Mar)
Bay?s ?,Collins MO,Reig-Viader R,Gou G,Goulding D,Izquierdo A,Choudhary JS,Emes RD,Grant SG

Immunomodulatory drugs disrupt the cereblon-CD147-MCT1 axis to exert antitumor activity and teratogenicity.
Nature medicine22(7)735-43(2016 07)
Eichner R,Heider M,Fern?ndez-S?iz V,van Bebber F,Garz AK,Lemeer S,Rudelius M,Targosz BS,Jacobs L,Knorn AM,Slawska J,Platzbecker U,Germing U,Langer C,Knop S,Einsele H,Peschel C,Haass C,Keller U,Schmid B,G?tze KS,Kuster B,Bassermann F

Phenotype anchoring in zebrafish reveals a potential role for matrix metalloproteinases (MMPs) in tamoxifen's effects on skin epithelium.
Toxicology and applied pharmacology29631-41(2016 Apr)
Bugel SM,Wehmas LC,La Du JK,Tanguay RL

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

Novel Genes Critical for Hypoxic Preconditioning in Zebrafish Are Regulators of Insulin and Glucose Metabolism.
G3 (Bethesda, Md.)5(6)1107-16(2015 Apr)
Manchenkov T,Pasillas MP,Haddad GG,Imam FB

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bsg cDNA ORF clone, Danio rerio(zebrafish)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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