hnrnpub cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	hnrnpub
Entrez Gene ID	334490
Full Name	heterogeneous nuclear ribonucleoprotein Ub
Synonyms	hnrnpu,hnrpu,wu:fa66f11,wu:fc18b08,wu:fi89c08,zgc:111835,zgc:136480
General protein information	Preferred Names heterogeneous nuclear ribonucleoprotein Ub Names heterogeneous nuclear ribonucleoprotein U nuclear ribonucleoprotein U-like protein
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001033595.2	NP_001028767.2	heterogeneous nuclear ribonucleoprotein U

Pathways from BioSystems

Homologies

Canis lupus familiaris (dog)	HNRNPU	XP_005622662.1
Homo sapiens (human)	HNRNPU	NP_114032.2
Mus musculus (house mouse)	Hnrnpu	NP_058085.2
Danio rerio (zebrafish)	hnrnpua	XP_694691.5
Gallus gallus (chicken)	HNRNPU	XP_419539.4
Danio rerio (zebrafish)	hnrnpub	NP_001028767.2
Xenopus tropicalis (tropical clawed frog)	hnrnpu	NP_001090833.1
Bos taurus (cattle)	HNRNPU	NP_001070388.2
Rattus norvegicus (Norway rat)	Hnrnpu	NP_476480.2
	HNRNPU	XP_001102264.2

Gene Ontology
Bibliography

Related articles in PubMed

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

Identification of nodal signaling targets by array analysis of induced complex probes.
Dickmeis T, Aanstad P, Clark M, Fischer N, Herwig R, Mourrain P, Blader P, Rosa F, Lehrach H, Str?hle U
Developmental dynamics : an official publication of the American Association of Anatomists222(4)571-80(2001 Dec)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following hnrnpub gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the hnrnpub cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa35145	NM_001033595.2 Latest version!	Danio rerio heterogeneous nuclear ribonucleoprotein Ub (hnrnpub), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	TBD	$426.30 $609.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

hnrnpub ( NM_001033595.2 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001028767.2 Danio rerio heterogeneous nuclear ribonucleoprotein Ub (hnrnpub), mRNA.

Price & Availability↑

CloneID	ODa35145
Clone ID Related Accession (Same CDS sequence)	NM_001033595.2
Accession Version	NM_001033595.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2391bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-11-23
Organism	Danio rerio(zebrafish)
Product	heterogeneous nuclear ribonucleoprotein U
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BI876648.1, BC117608.1, CT625245.2, CT607270.2, CT600146.2, CT615977.2, AL729886.1 and CT598091.2. On or before Jun 14, 2012 this sequence version replaced NM_001001592.1, NM_001033595.1. Sequence note: This RefSeq record was created from transcript data from different strains because no single transcript from the same strain was available for the full length of the gene. The extent of this transcript is supported by transcript alignments and orthologous data. ##Evidence-Data-START## Transcript exon combination :: BC100038.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END##

ATGAGTGAAA TCAACGTGAA AAAGCTTAAG GTGAACGAGC TGAAGGACGA GCTAAAGAAG 
CGGCAGCTCT CTGACAAGGG GTTGAAGGCC GAGCTCATGG AGCGTCTGCA GGCCGCGCTC 
GACGCAGAGG CCCAGGCCCA AGAGGAAGAA ACGACCGCGC CAGGGACTAC AGAAGGTAGT 
AAGGTAGGAA ACGATGCCGA TGGAAACGGC GTTGCAGCCG AACAAGAAGG TACGGGTGAA 
GAAGAGCCGG AGGGGGAAAA CATGGAGGCC GAGGAGCAGA ATGGGGAAGG AGATGAAGCC 
GCCGGTCAGG ACGACGAAAT GGGAGAGGAG GAGGAGGAGG ACGACGACGA CGACGACGCC 
GGGGAGGAAA TAGACAAAGC CTTAGACGAT GAAGATGATG AAGAAGACGA TATCATTGAC 
AAAATCGACG TTGAAGACGG GGATGCGGAC AAAGACAGCA GTGCTGATCA GAAGAATAAG 
AAGGGTGTTA AGAGACGCCG AGAGGATCAT GGAAGGGGCT ACTTTGAATT TATTGAAGAA 
AGCAAATACA GCCGGACCAA GTCTCCTCAG CCGCCTTTGG AGGAAGTGGA TGAAGAGTTT 
GATGACACCC TGGTCTGCTT GGATCCATAC AATTGTGACC TTCACTTCAA AGTGTCCCGG 
AACCGTTACA GTGCCTCCTC TCTTACCATG GAGAGTTTTG CTCACCTTTG GGCAGGTGGC 
CGTGCATCTT ATGGTGTAAA CAAGGGCAAA GTCTGCTTTG AAATGAAGGT CACTGAGAAA 
ACCCCAATCA AGCATTTAAA CAGCAAAATC ATGGACTTCC ATGATGTCCA TATTGGCTGG 
TCTCTGGCTA ATGGGTGTCT GTCACTAGGT GAGGAGGAGT TTTCTTACTC CTATTCTGAC 
AAAGGGAAGA AGGCTTCAAA CTGTGTGACT GAAGACTACG GGGAGGGCTT TGATGAAAAT 
GATGTCATCG GCTGCTTCAT TAATTTCGAG GCTGATGAAG TGGAGATTTC CTTTTCTAAA 
AATGGCAATG ACCTTGGTGT GGCTTTCAAG GTCAATAAGG AGTCGTTGGC TGACAGAGCC 
CTGTTCCCCC ATGTTCTTTG TCACAACTGT ACTGTTGAGT TCAATTTTGG TCAGAACGAG 
ACTCCGTTCT TCCCTAAGTT GGAGGACTTC ACCTTTATGC AGCAGATTCC TCTGGAAGAG 
CGTATCAGAG GACCCAAAGG ACCTGTGGCC AAGAAAGACT GCGAGGTGAT TGTCATGGTC 
GGCCTTCCTG GATCTGGAAA AACTACCTGG GTAGTTAAAC ATGTTGAAGA AAACCCTGGG 
AAGTACAACA TCCTCAGCAC CAACACCGTC TTGGAGAAAT TGATGATTAA CAGCGTAAAG 
AGGCAAAATA AAGACATAAC AAAACTCATG GCCATTTCCC AGCGTGTTCC TTTTTACCTG 
GGCAAGTTGA TTGAAATTGC TGCCCGCAAA AAAAGACACT ATATTTTGGA CCAGACGAAC 
GTCTCTTCAG CAGCCCAAAG AAGGAAGATG TGTCTGTTTG CTGGTTTCCA GCGCAAAGCC 
GTGGTGGTCT TTCCCACAGA TGAGAACTTA AAGGAGAGAG CGCAGAAGAA GGCAGAAGCG 
GATGGTAAAG ATATACCCGA GCACGCCCTA CTCAAAATGA AAGCTCTCTA CACGCTTCCA 
GAACAAGGGG ACTGCTTTTC AGAGGTCACC TATGTTGAGC TGCAGAAGGA CGAGGCCTCC 
AAGCTTTTGG AGAAGTACAA GGAAGAGAGT AAGAATGCTT TGCCTCCAGA GAAGAAGCCC 
AACCAGGGAC CCCCAACTCC CAAACGGGGA TCCCGCCGAG GAAGAGGGCA AAAGAACCAG 
TTCAACAGGA GTGGTGGTGG TGGTGGTGGT GGTGGTCAAG GAAACCGTGG AGGCAGGGGT 
GGATTCCAGC CCCGAGGAAA CTACAGAGCG TTGCTTGCAC CACCTCGTGT GAGCGGATTT 
GATCGTCGCC CGCGGGGTTA CATTCTGCCA CCTCCACCAC CACCACCAGT CTACCGAGGT 
TATCCTAGCA GAGACGGTTA CAACAGAGGA GGGTCTGGTG GAATGCAGAG TAGAGGAATG 
TCTCCGCGCG GTGGACAAAT GAGGGGCAAC ATGGCCAGCA GAGGTGGTGG AATGAGCCGT 
GGAGGACATG CCAACAGAGG AGGAAACATG CACCGCGGAG GTGGACAAGG TGGTCCCAAC 
CACAGAGGAC ACTACCAGCA GAAATTCCAC GGCAGAGGAG GCCACCAGCA GAATCGTGGA 
GGATATGGCA ACAAGAACAG CTCTTTTGCC CAAGCCTTCA ACCAGAGCTG GCAACAAGGG 
TTCTGGAACC AGAAGCCATG GAATCAACAG TACCATCCAG GATATTATTG A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001028767.2
CDS	149..2539
Translation	MSEINVKKLKVNELKDELKKRQLSDKGLKAELMERLQAALDAEAQAQEEETTAPGTTEGSKVGNDADGNGVAAEQEGTGEEEPEGENMEAEEQNGEGDEAAGQDDEMGEEEEEDDDDDDAGEEIDKALDDEDDEEDDIIDKIDVEDGDADKDSSADQKNKKGVKRRREDHGRGYFEFIEESKYSRTKSPQPPLEEVDEEFDDTLVCLDPYNCDLHFKVSRNRYSASSLTMESFAHLWAGGRASYGVNKGKVCFEMKVTEKTPIKHLNSKIMDFHDVHIGWSLANGCLSLGEEEFSYSYSDKGKKASNCVTEDYGEGFDENDVIGCFINFEADEVEISFSKNGNDLGVAFKVNKESLADRALFPHVLCHNCTVEFNFGQNETPFFPKLEDFTFMQQIPLEERIRGPKGPVAKKDCEVIVMVGLPGSGKTTWVVKHVEENPGKYNILSTNTVLEKLMINSVKRQNKDITKLMAISQRVPFYLGKLIEIAARKKRHYILDQTNVSSAAQRRKMCLFAGFQRKAVVVFPTDENLKERAQKKAEADGKDIPEHALLKMKALYTLPEQGDCFSEVTYVELQKDEASKLLEKYKEESKNALPPEKKPNQGPPTPKRGSRRGRGQKNQFNRSGGGGGGGGQGNRGGRGGFQPRGNYRALLAPPRVSGFDRRPRGYILPPPPPPPVYRGYPSRDGYNRGGSGGMQSRGMSPRGGQMRGNMASRGGGMSRGGHANRGGNMHRGGGQGGPNHRGHYQQKFHGRGGHQQNRGGYGNKNSSFAQAFNQSWQQGFWNQKPWNQQYHPGYY

Target ORF information:

RefSeq Version	NM_001033595.2
Organism	Danio rerio(zebrafish)
Definition	Danio rerio heterogeneous nuclear ribonucleoprotein Ub (hnrnpub), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001033595.2

ORF Insert Sequence:

ATGAGTGAAA TCAACGTGAA AAAGCTTAAG GTGAACGAGC TGAAGGACGA GCTAAAGAAG 
CGGCAGCTCT CTGACAAGGG GTTGAAGGCC GAGCTCATGG AGCGTCTGCA GGCCGCGCTC 
GACGCAGAGG CCCAGGCCCA AGAGGAAGAA ACGACCGCGC CAGGGACTAC AGAAGGTAGT 
AAGGTAGGAA ACGATGCCGA TGGAAACGGC GTTGCAGCCG AACAAGAAGG TACGGGTGAA 
GAAGAGCCGG AGGGGGAAAA CATGGAGGCC GAGGAGCAGA ATGGGGAAGG AGATGAAGCC 
GCCGGTCAGG ACGACGAAAT GGGAGAGGAG GAGGAGGAGG ACGACGACGA CGACGACGCC 
GGGGAGGAAA TAGACAAAGC CTTAGACGAT GAAGATGATG AAGAAGACGA TATCATTGAC 
AAAATCGACG TTGAAGACGG GGATGCGGAC AAAGACAGCA GTGCTGATCA GAAGAATAAG 
AAGGGTGTTA AGAGACGCCG AGAGGATCAT GGAAGGGGCT ACTTTGAATT TATTGAAGAA 
AGCAAATACA GCCGGACCAA GTCTCCTCAG CCGCCTTTGG AGGAAGTGGA TGAAGAGTTT 
GATGACACCC TGGTCTGCTT GGATCCATAC AATTGTGACC TTCACTTCAA AGTGTCCCGG 
AACCGTTACA GTGCCTCCTC TCTTACCATG GAGAGTTTTG CTCACCTTTG GGCAGGTGGC 
CGTGCATCTT ATGGTGTAAA CAAGGGCAAA GTCTGCTTTG AAATGAAGGT CACTGAGAAA 
ACCCCAATCA AGCATTTAAA CAGCAAAATC ATGGACTTCC ATGATGTCCA TATTGGCTGG 
TCTCTGGCTA ATGGGTGTCT GTCACTAGGT GAGGAGGAGT TTTCTTACTC CTATTCTGAC 
AAAGGGAAGA AGGCTTCAAA CTGTGTGACT GAAGACTACG GGGAGGGCTT TGATGAAAAT 
GATGTCATCG GCTGCTTCAT TAATTTCGAG GCTGATGAAG TGGAGATTTC CTTTTCTAAA 
AATGGCAATG ACCTTGGTGT GGCTTTCAAG GTCAATAAGG AGTCGTTGGC TGACAGAGCC 
CTGTTCCCCC ATGTTCTTTG TCACAACTGT ACTGTTGAGT TCAATTTTGG TCAGAACGAG 
ACTCCGTTCT TCCCTAAGTT GGAGGACTTC ACCTTTATGC AGCAGATTCC TCTGGAAGAG 
CGTATCAGAG GACCCAAAGG ACCTGTGGCC AAGAAAGACT GCGAGGTGAT TGTCATGGTC 
GGCCTTCCTG GATCTGGAAA AACTACCTGG GTAGTTAAAC ATGTTGAAGA AAACCCTGGG 
AAGTACAACA TCCTCAGCAC CAACACCGTC TTGGAGAAAT TGATGATTAA CAGCGTAAAG 
AGGCAAAATA AAGACATAAC AAAACTCATG GCCATTTCCC AGCGTGTTCC TTTTTACCTG 
GGCAAGTTGA TTGAAATTGC TGCCCGCAAA AAAAGACACT ATATTTTGGA CCAGACGAAC 
GTCTCTTCAG CAGCCCAAAG AAGGAAGATG TGTCTGTTTG CTGGTTTCCA GCGCAAAGCC 
GTGGTGGTCT TTCCCACAGA TGAGAACTTA AAGGAGAGAG CGCAGAAGAA GGCAGAAGCG 
GATGGTAAAG ATATACCCGA GCACGCCCTA CTCAAAATGA AAGCTCTCTA CACGCTTCCA 
GAACAAGGGG ACTGCTTTTC AGAGGTCACC TATGTTGAGC TGCAGAAGGA CGAGGCCTCC 
AAGCTTTTGG AGAAGTACAA GGAAGAGAGT AAGAATGCTT TGCCTCCAGA GAAGAAGCCC 
AACCAGGGAC CCCCAACTCC CAAACGGGGA TCCCGCCGAG GAAGAGGGCA AAAGAACCAG 
TTCAACAGGA GTGGTGGTGG TGGTGGTGGT GGTGGTCAAG GAAACCGTGG AGGCAGGGGT 
GGATTCCAGC CCCGAGGAAA CTACAGAGCG TTGCTTGCAC CACCTCGTGT GAGCGGATTT 
GATCGTCGCC CGCGGGGTTA CATTCTGCCA CCTCCACCAC CACCACCAGT CTACCGAGGT 
TATCCTAGCA GAGACGGTTA CAACAGAGGA GGGTCTGGTG GAATGCAGAG TAGAGGAATG 
TCTCCGCGCG GTGGACAAAT GAGGGGCAAC ATGGCCAGCA GAGGTGGTGG AATGAGCCGT 
GGAGGACATG CCAACAGAGG AGGAAACATG CACCGCGGAG GTGGACAAGG TGGTCCCAAC 
CACAGAGGAC ACTACCAGCA GAAATTCCAC GGCAGAGGAG GCCACCAGCA GAATCGTGGA 
GGATATGGCA ACAAGAACAG CTCTTTTGCC CAAGCCTTCA ACCAGAGCTG GCAACAAGGG 
TTCTGGAACC AGAAGCCATG GAATCAACAG TACCATCCAG GATATTATTG A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

Identification of nodal signaling targets by array analysis of induced complex probes.
Developmental dynamics : an official publication of the American Association of Anatomists222(4)571-80(2001 Dec)
Dickmeis T,Aanstad P,Clark M,Fischer N,Herwig R,Mourrain P,Blader P,Rosa F,Lehrach H,Str?hle U

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hnrnpub cDNA ORF clone, Danio rerio(zebrafish)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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