utp15 cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	utp15
Entrez Gene ID	325106
Full Name	utp15, U3 small nucleolar ribonucleoprotein, homolog
Synonyms	fc55e07,flj12787,wu:fc55e07,zgc:55320
General protein information	Preferred Names utp15, U3 small nucleolar ribonucleoprotein, homolog Names U3 small nucleolar RNA-associated protein 15 homolog
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
XM_005158982.4	XP_005159039.1	U3 small nucleolar RNA-associated protein 15 homolog isoform X1
XM_005158982.3	XP_005159039.1	U3 small nucleolar RNA-associated protein 15 homolog isoform X1
NM_199704.1	NP_955998.1	U3 small nucleolar RNA-associated protein 15 homolog

Pathways from BioSystems

Homologies

Kluyveromyces lactis	KLLA0F13772g	XP_455700.1
Homo sapiens (human)	UTP15	NP_115551.2
	UTP15	XP_001100602.1
Drosophila melanogaster (fruit fly)	CG3071	NP_569993.1
Schizosaccharomyces pombe (fission yeast)	utp15	NP_595197.1
Oryza sativa (rice)	Os07g0224900	NP_001059211.2
Xenopus tropicalis (tropical clawed frog)	utp15	NP_001011103.1
Canis lupus familiaris (dog)	UTP15	XP_535274.3
Mus musculus (house mouse)	Utp15	NP_849249.1
Gallus gallus (chicken)	UTP15	NP_001012624.1
Danio rerio (zebrafish)	utp15	NP_955998.1
Saccharomyces cerevisiae (baker's yeast)	UTP15	NP_013811.1
Pan troglodytes (chimpanzee)	UTP15	XP_001151559.1
Bos taurus (cattle)	UTP15	NP_001094598.1
Magnaporthe oryzae (rice blast fungus)	MGG_03129	XP_003716870.1
Neurospora crassa	NCU09843	XP_958041.1
Arabidopsis thaliana (thale cress)	SWA1	NP_182320.1
Rattus norvegicus (Norway rat)	Utp15	NP_001101117.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP002088	XP_320954.4
Eremothecium gossypii	AGOS_ABL044C	NP_982903.1

Gene Ontology
Bibliography

Related articles in PubMed

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

Mutation in utp15 disrupts vascular patterning in a p53-dependent manner in zebrafish embryos.
Mouillesseaux K, Chen JN
PloS one6(9)e25013(2011)

Hematopoietic gene expression profile in zebrafish kidney marrow.
Song HD, Sun XJ, Deng M, Zhang GW, Zhou Y, Wu XY, Sheng Y, Chen Y, Ruan Z, Jiang CL, Fan HY, Zon LI, Kanki JP, Liu TX, Look AT, Chen Z
Proceedings of the National Academy of Sciences of the United States of America101(46)16240-5(2004 Nov)

Identification of 315 genes essential for early zebrafish development.
Amsterdam A, Nissen RM, Sun Z, Swindell EC, Farrington S, Hopkins N
Proceedings of the National Academy of Sciences of the United States of America101(35)12792-7(2004 Aug)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

Mutation in utp15 disrupts vascular patterning in a p53-dependent manner.
Title: Mutation in utp15 disrupts vascular patterning in a p53-dependent manner in zebrafish embryos.

The following utp15 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the utp15 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
ODa38087	NM_199704.1 Latest version!	Danio rerio UTP15 small subunit processome component (utp15), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$342.30 $489.00
ODa23067	XM_005158982.4 Latest version!	Danio rerio utp15, U3 small nucleolar ribonucleoprotein, homolog (utp15), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$342.30 $489.00
View Old Accession Versions >>
ODa23067	XM_005158982.3	Danio rerio utp15, U3 small nucleolar ribonucleoprotein, homolog (utp15), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$342.30 $489.00
Hide Old Accession Versions >>

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

utp15 ( NM_199704.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_955998.1 Danio rerio UTP15 small subunit processome component (utp15), mRNA.

Price & Availability↑

CloneID	ODa38087
Clone ID Related Accession (Same CDS sequence)	NM_199704.1
Accession Version	NM_199704.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1554bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-07
Organism	Danio rerio(zebrafish)
Product	U3 small nucleolar RNA-associated protein 15 homolog
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC045308.1. ##Evidence-Data-START## Transcript exon combination :: BC045308.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350] ##Evidence-Data-END##

ATGGCTTCGT TCAAACCCAC CAAAGTCCTG AGCTATCCTA AACTAGGAGA GAAAGTGACA 
GAAGAAACAC TGTACTGGAA AAACTACAAG CCTCCTGTAC AGATTAAAGA GTTTGGCGCT 
GTATCAAAGA TCGACTTCTC TCCTCTTCCA CCTCACAATT ATGCCGTCAC GGCCTCCACC 
AGAGTCCACA TATATGGACT TCACTCTCAA GAGCCCATTC GAAACTTCAC GCGGTTCCAT 
GATACGGCAT ATGGTGGGAG TTTCAGAGGA GATGGAAAAC TTTTAGTGGC AGGAAGTGAG 
GAGGGACTGA TCCGACTGTT CGACATCGGG GGTCGAGTGT CTCTCAGACA GTTCAAAGGA 
CACTCCAAAG CAGTGCATGC CACCTCGTTC CTGTCTGATG GTTTTCGTGT GCTGTCGGGT 
TCAGATGACC TGACGTGTCG TGTGTGGGAC GTCGCCAGTG CCGTTGAGCT CAGTTCAATC 
ACAGAACACA CTGATTATAT CAGAGCCATT GCTCCCAGCA AACTCAACCC AGACGTGTTT 
GTCACTGGTT CGTATGACCA CACAGTGAAA ATGTTCGACG TGCGCTCTGG AAACAGTGTG 
ATGACAATGC AGCATGGTCA GCCTGTGGAG TGTGTGCTGC TGTACCCGTC TGAGGCTCTG 
CTGGTGTCCA CAGGAGGGCG CTATGTAAAA GTTTGGGACC TGTTGAAAGG TGGACAGCAG 
CTTGTTTCTC TTAAAAATCA TCATAAAACA GTAACCTGTG CATGTCTGAG TTCAAGCAAC 
AAACTGCTGA CAGCATCACT GGACCGGCAC GTCAAAGTAT ATAACTCATC CTATAAGGTT 
GTGCATAATT TTGACTGTGC GTCATCTATT CTCAGTCTGG CTGTTGCGCC TGATGATGAA 
GCAGTCGCTG TAGGAATGAC CAATGGTGTG TTGAGCATCA GACACAGGAA ACACAAAGAA 
GAGAAAGAAG CTTTAACAGG TCGAAGGAAA CGCGGTCCGT CGTACCGCTT CTTTGTTAAG 
GGGAAAAACT TTGTGCCTAG ACAGGATGAT TTCCTGGTCA GTAAACCAGT GAGGCAGCAT 
CTACAGAAAT ACGACAAACA GCTGAAAAGA TTTGAGGTCT CCAAAGCCCT GGACACTGCG 
CTTGAGACAT GGACGCGAAC TACTAAACCA GAGGTGACGG TTGCAGTAAT AATGGAGCTG 
AACCGCAGAG GAACACTGAA AAACGCCCTC GCTGGGCGAG ATGAAGTGAG CTTAACCAAG 
ATACTCAACT TTCTTCTCAA GCACATCACC GACCCGCGCT TCTCTCGGCC TCTGCTCACA 
GTCGGGGATA TTGTTCTGGA TCTGTATCAG CAGGTTATTC CCCAGTCACC TGTGGTGGAG 
CGCCTGCTGC AGCGTCTTTA TGAGATTTTG GGTCGAGAAG CAGAACTTCA ACAGGAGCTT 
CTGCAGGTTT TGGGAATCCT GGACACACTT TTTGCCTCCC TGATGCCCAG AAAAGAGGTT 
GCAAGTTTTG GCGCGGCAGC AGCAGCGCAG GAGTCCCAGC TACAGGCCGC CTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_955998.1
CDS	90..1643
Translation	MASFKPTKVLSYPKLGEKVTEETLYWKNYKPPVQIKEFGAVSKIDFSPLPPHNYAVTASTRVHIYGLHSQEPIRNFTRFHDTAYGGSFRGDGKLLVAGSEEGLIRLFDIGGRVSLRQFKGHSKAVHATSFLSDGFRVLSGSDDLTCRVWDVASAVELSSITEHTDYIRAIAPSKLNPDVFVTGSYDHTVKMFDVRSGNSVMTMQHGQPVECVLLYPSEALLVSTGGRYVKVWDLLKGGQQLVSLKNHHKTVTCACLSSSNKLLTASLDRHVKVYNSSYKVVHNFDCASSILSLAVAPDDEAVAVGMTNGVLSIRHRKHKEEKEALTGRRKRGPSYRFFVKGKNFVPRQDDFLVSKPVRQHLQKYDKQLKRFEVSKALDTALETWTRTTKPEVTVAVIMELNRRGTLKNALAGRDEVSLTKILNFLLKHITDPRFSRPLLTVGDIVLDLYQQVIPQSPVVERLLQRLYEILGREAELQQELLQVLGILDTLFASLMPRKEVASFGAAAAAQESQLQAA

Target ORF information:

RefSeq Version	NM_199704.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio UTP15 small subunit processome component (utp15), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_199704.1

ORF Insert Sequence:

ATGGCTTCGT TCAAACCCAC CAAAGTCCTG AGCTATCCTA AACTAGGAGA GAAAGTGACA 
GAAGAAACAC TGTACTGGAA AAACTACAAG CCTCCTGTAC AGATTAAAGA GTTTGGCGCT 
GTATCAAAGA TCGACTTCTC TCCTCTTCCA CCTCACAATT ATGCCGTCAC GGCCTCCACC 
AGAGTCCACA TATATGGACT TCACTCTCAA GAGCCCATTC GAAACTTCAC GCGGTTCCAT 
GATACGGCAT ATGGTGGGAG TTTCAGAGGA GATGGAAAAC TTTTAGTGGC AGGAAGTGAG 
GAGGGACTGA TCCGACTGTT CGACATCGGG GGTCGAGTGT CTCTCAGACA GTTCAAAGGA 
CACTCCAAAG CAGTGCATGC CACCTCGTTC CTGTCTGATG GTTTTCGTGT GCTGTCGGGT 
TCAGATGACC TGACGTGTCG TGTGTGGGAC GTCGCCAGTG CCGTTGAGCT CAGTTCAATC 
ACAGAACACA CTGATTATAT CAGAGCCATT GCTCCCAGCA AACTCAACCC AGACGTGTTT 
GTCACTGGTT CGTATGACCA CACAGTGAAA ATGTTCGACG TGCGCTCTGG AAACAGTGTG 
ATGACAATGC AGCATGGTCA GCCTGTGGAG TGTGTGCTGC TGTACCCGTC TGAGGCTCTG 
CTGGTGTCCA CAGGAGGGCG CTATGTAAAA GTTTGGGACC TGTTGAAAGG TGGACAGCAG 
CTTGTTTCTC TTAAAAATCA TCATAAAACA GTAACCTGTG CATGTCTGAG TTCAAGCAAC 
AAACTGCTGA CAGCATCACT GGACCGGCAC GTCAAAGTAT ATAACTCATC CTATAAGGTT 
GTGCATAATT TTGACTGTGC GTCATCTATT CTCAGTCTGG CTGTTGCGCC TGATGATGAA 
GCAGTCGCTG TAGGAATGAC CAATGGTGTG TTGAGCATCA GACACAGGAA ACACAAAGAA 
GAGAAAGAAG CTTTAACAGG TCGAAGGAAA CGCGGTCCGT CGTACCGCTT CTTTGTTAAG 
GGGAAAAACT TTGTGCCTAG ACAGGATGAT TTCCTGGTCA GTAAACCAGT GAGGCAGCAT 
CTACAGAAAT ACGACAAACA GCTGAAAAGA TTTGAGGTCT CCAAAGCCCT GGACACTGCG 
CTTGAGACAT GGACGCGAAC TACTAAACCA GAGGTGACGG TTGCAGTAAT AATGGAGCTG 
AACCGCAGAG GAACACTGAA AAACGCCCTC GCTGGGCGAG ATGAAGTGAG CTTAACCAAG 
ATACTCAACT TTCTTCTCAA GCACATCACC GACCCGCGCT TCTCTCGGCC TCTGCTCACA 
GTCGGGGATA TTGTTCTGGA TCTGTATCAG CAGGTTATTC CCCAGTCACC TGTGGTGGAG 
CGCCTGCTGC AGCGTCTTTA TGAGATTTTG GGTCGAGAAG CAGAACTTCA ACAGGAGCTT 
CTGCAGGTTT TGGGAATCCT GGACACACTT TTTGCCTCCC TGATGCCCAG AAAAGAGGTT 
GCAAGTTTTG GCGCGGCAGC AGCAGCGCAG GAGTCCCAGC TACAGGCCGC CTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

utp15 ( XM_005158982.4 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_005159039.1 Danio rerio utp15, U3 small nucleolar ribonucleoprotein, homolog (utp15), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ODa23067
Clone ID Related Accession (Same CDS sequence)	XM_005158982.4 , XM_005158982.3
Accession Version	XM_005158982.4 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1554bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-06-14
Organism	Danio rerio(zebrafish)
Product	U3 small nucleolar RNA-associated protein 15 homolog isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007129.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_005158982.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCTTCGT TCAAACCCAC CAAAGTCCTG AGCTATCCTA AACTAGGAGA GAAAGTGACA 
GAAGAAACAC TGTACTGGAA AAACTACAAG CCTCCTGTAC AGATTAAAGA GTTTGGCGCT 
GTATCAAAGA TCGACTTCTC TCCTCTTCCA CCTCACAATT ATGCCGTCAC GGCCTCCACC 
AGAGTCCACA TATATGGACT TCACTCTCAA GAGCCCATTC GAAACTTCAC GCGGTTCCAT 
GATACGGCAT ATGGTGGGAG TTTCAGAGGA GATGGAAAAC TTTTAGTGGC AGGAAGTGAG 
GAGGGACTGA TCCGACTGTT CGACATCGGG GGTCGAGTGT CTCTCAGACA GTTCAAAGGA 
CACTCCAAAG CGGTGCATGC CACCTCGTTC CTGTCTGATG GTTTTCGTGT GCTGTCGGGT 
TCAGATGACC TGACGTGTCG TGTGTGGGAC GTCGCCAGTG CCGTTGAGCT CAGTTCAATC 
ACAGAACACA CTGATTATAT CAGAGCCATT GCTCCCAGCA AACTCAACCC AGACGTGTTT 
GTCACTGGTT CGTATGACCA CACAGTGAAA ATGTTCGACG TGCGCTCTGG AAACAGTGTG 
ATGACAATGC AGCATGGTCA GCCTGTGGAG TGTGTGCTGC TGTACCCGTC TGAGGCTCTG 
CTGGTGTCCA CAGGAGGGCG CTATGTAAAA GTTTGGGACC TGTTGAAAGG TGGACAGCAG 
CTTGTTTCTC TTAAAAATCA TCATAAAACA GTAACCTGTG CATGTCTGAG TTCAAGCAAC 
AAACTGCTGA CAGCATCACT GGACCGGCAC GTCAAAGTAT ATAACTCATC CTATAAGGTT 
GTGCATAATT TTGACTGTGC GTCATCTATT CTCAGTCTGG CTGTTGCGCC TGATGATGAA 
GCAGTCGCTG TAGGAATGAC CAATGGTGTG TTGAGCATCA GACACAGGAA ACACAAAGAA 
GAGAAAGAAG CTTTAACAGG TCGAAGGAAA CGCGGTCCGT CGTACCGCTT CTTTGTTAAG 
GGGAAAAACT TTGTGCCTAG ACAGGATGAT TTCCTGGTCA GTAAACCAGT GAGGCAGCAT 
CTACAGAAAT ACGACAAACA GCTGAAAAGA TTTGAGGTCT CCAAAGCCCT GGACACTGCG 
CTTGAGACAT GGACGCGAAC TACTAAACCA GAGGTGACGG TCGCAGTAAT AATGGAGCTG 
AACCGCAGAG GAACACTGAA AAACGCCCTC GCTGGGCGAG ATGAAGTGAG CTTAACCAAG 
ATACTCAACT TTCTTCTCAA GCACATCACC GACCCGCGCT TCTCTCGGCC TCTGCTCACA 
GTCGGGGATA TTGTTCTGGA TCTGTATCAG CAGGTTATTC CCCAGTCACC TGTGGTGGAG 
CGCCTGCTGC AGCGTCTTTA TGAGATTTTG GGTCGAGAAG CAGAACTTCA ACAGGAGCTT 
CTGCAGGTTT TGGGAATCCT GGACACACTT TTTGCCTCCC TGATGCCCAG AAAAGAGGTT 
GCAAGTTTTG GCGCGGCAGC AGCAGCGCAG GAGTCCCAGC TACAGGCTGC CTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_005159039.1
CDS	175..1728
Translation	MASFKPTKVLSYPKLGEKVTEETLYWKNYKPPVQIKEFGAVSKIDFSPLPPHNYAVTASTRVHIYGLHSQEPIRNFTRFHDTAYGGSFRGDGKLLVAGSEEGLIRLFDIGGRVSLRQFKGHSKAVHATSFLSDGFRVLSGSDDLTCRVWDVASAVELSSITEHTDYIRAIAPSKLNPDVFVTGSYDHTVKMFDVRSGNSVMTMQHGQPVECVLLYPSEALLVSTGGRYVKVWDLLKGGQQLVSLKNHHKTVTCACLSSSNKLLTASLDRHVKVYNSSYKVVHNFDCASSILSLAVAPDDEAVAVGMTNGVLSIRHRKHKEEKEALTGRRKRGPSYRFFVKGKNFVPRQDDFLVSKPVRQHLQKYDKQLKRFEVSKALDTALETWTRTTKPEVTVAVIMELNRRGTLKNALAGRDEVSLTKILNFLLKHITDPRFSRPLLTVGDIVLDLYQQVIPQSPVVERLLQRLYEILGREAELQQELLQVLGILDTLFASLMPRKEVASFGAAAAAQESQLQAA

Target ORF information:

RefSeq Version	XM_005158982.4
Organism	Danio rerio(zebrafish)
Definition	Danio rerio utp15, U3 small nucleolar ribonucleoprotein, homolog (utp15), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_005158982.4

ORF Insert Sequence:

ATGGCTTCGT TCAAACCCAC CAAAGTCCTG AGCTATCCTA AACTAGGAGA GAAAGTGACA 
GAAGAAACAC TGTACTGGAA AAACTACAAG CCTCCTGTAC AGATTAAAGA GTTTGGCGCT 
GTATCAAAGA TCGACTTCTC TCCTCTTCCA CCTCACAATT ATGCCGTCAC GGCCTCCACC 
AGAGTCCACA TATATGGACT TCACTCTCAA GAGCCCATTC GAAACTTCAC GCGGTTCCAT 
GATACGGCAT ATGGTGGGAG TTTCAGAGGA GATGGAAAAC TTTTAGTGGC AGGAAGTGAG 
GAGGGACTGA TCCGACTGTT CGACATCGGG GGTCGAGTGT CTCTCAGACA GTTCAAAGGA 
CACTCCAAAG CGGTGCATGC CACCTCGTTC CTGTCTGATG GTTTTCGTGT GCTGTCGGGT 
TCAGATGACC TGACGTGTCG TGTGTGGGAC GTCGCCAGTG CCGTTGAGCT CAGTTCAATC 
ACAGAACACA CTGATTATAT CAGAGCCATT GCTCCCAGCA AACTCAACCC AGACGTGTTT 
GTCACTGGTT CGTATGACCA CACAGTGAAA ATGTTCGACG TGCGCTCTGG AAACAGTGTG 
ATGACAATGC AGCATGGTCA GCCTGTGGAG TGTGTGCTGC TGTACCCGTC TGAGGCTCTG 
CTGGTGTCCA CAGGAGGGCG CTATGTAAAA GTTTGGGACC TGTTGAAAGG TGGACAGCAG 
CTTGTTTCTC TTAAAAATCA TCATAAAACA GTAACCTGTG CATGTCTGAG TTCAAGCAAC 
AAACTGCTGA CAGCATCACT GGACCGGCAC GTCAAAGTAT ATAACTCATC CTATAAGGTT 
GTGCATAATT TTGACTGTGC GTCATCTATT CTCAGTCTGG CTGTTGCGCC TGATGATGAA 
GCAGTCGCTG TAGGAATGAC CAATGGTGTG TTGAGCATCA GACACAGGAA ACACAAAGAA 
GAGAAAGAAG CTTTAACAGG TCGAAGGAAA CGCGGTCCGT CGTACCGCTT CTTTGTTAAG 
GGGAAAAACT TTGTGCCTAG ACAGGATGAT TTCCTGGTCA GTAAACCAGT GAGGCAGCAT 
CTACAGAAAT ACGACAAACA GCTGAAAAGA TTTGAGGTCT CCAAAGCCCT GGACACTGCG 
CTTGAGACAT GGACGCGAAC TACTAAACCA GAGGTGACGG TCGCAGTAAT AATGGAGCTG 
AACCGCAGAG GAACACTGAA AAACGCCCTC GCTGGGCGAG ATGAAGTGAG CTTAACCAAG 
ATACTCAACT TTCTTCTCAA GCACATCACC GACCCGCGCT TCTCTCGGCC TCTGCTCACA 
GTCGGGGATA TTGTTCTGGA TCTGTATCAG CAGGTTATTC CCCAGTCACC TGTGGTGGAG 
CGCCTGCTGC AGCGTCTTTA TGAGATTTTG GGTCGAGAAG CAGAACTTCA ACAGGAGCTT 
CTGCAGGTTT TGGGAATCCT GGACACACTT TTTGCCTCCC TGATGCCCAG AAAAGAGGTT 
GCAAGTTTTG GCGCGGCAGC AGCAGCGCAG GAGTCCCAGC TACAGGCTGC CTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

utp15 ( XM_005158982.3 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_005159039.1 Danio rerio utp15, U3 small nucleolar ribonucleoprotein, homolog (utp15), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ODa23067
Clone ID Related Accession (Same CDS sequence)	XM_005158982.4 , XM_005158982.3
Accession Version	XM_005158982.3	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1554bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-06-23
Organism	Danio rerio(Zebrafish)
Product	U3 small nucleolar RNA-associated protein 15 homolog isoform X1
Comment	MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007129.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_005158982.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCTTCGT TCAAACCCAC CAAAGTCCTG AGCTATCCTA AACTAGGAGA GAAAGTGACA 
GAAGAAACAC TGTACTGGAA AAACTACAAG CCTCCTGTAC AGATTAAAGA GTTTGGCGCT 
GTATCAAAGA TCGACTTCTC TCCTCTTCCA CCTCACAATT ATGCCGTCAC GGCCTCCACC 
AGAGTCCACA TATATGGACT TCACTCTCAA GAGCCCATTC GAAACTTCAC GCGGTTCCAT 
GATACGGCAT ATGGTGGGAG TTTCAGAGGA GATGGAAAAC TTTTAGTGGC AGGAAGTGAG 
GAGGGACTGA TCCGACTGTT CGACATCGGG GGTCGAGTGT CTCTCAGACA GTTCAAAGGA 
CACTCCAAAG CGGTGCATGC CACCTCGTTC CTGTCTGATG GTTTTCGTGT GCTGTCGGGT 
TCAGATGACC TGACGTGTCG TGTGTGGGAC GTCGCCAGTG CCGTTGAGCT CAGTTCAATC 
ACAGAACACA CTGATTATAT CAGAGCCATT GCTCCCAGCA AACTCAACCC AGACGTGTTT 
GTCACTGGTT CGTATGACCA CACAGTGAAA ATGTTCGACG TGCGCTCTGG AAACAGTGTG 
ATGACAATGC AGCATGGTCA GCCTGTGGAG TGTGTGCTGC TGTACCCGTC TGAGGCTCTG 
CTGGTGTCCA CAGGAGGGCG CTATGTAAAA GTTTGGGACC TGTTGAAAGG TGGACAGCAG 
CTTGTTTCTC TTAAAAATCA TCATAAAACA GTAACCTGTG CATGTCTGAG TTCAAGCAAC 
AAACTGCTGA CAGCATCACT GGACCGGCAC GTCAAAGTAT ATAACTCATC CTATAAGGTT 
GTGCATAATT TTGACTGTGC GTCATCTATT CTCAGTCTGG CTGTTGCGCC TGATGATGAA 
GCAGTCGCTG TAGGAATGAC CAATGGTGTG TTGAGCATCA GACACAGGAA ACACAAAGAA 
GAGAAAGAAG CTTTAACAGG TCGAAGGAAA CGCGGTCCGT CGTACCGCTT CTTTGTTAAG 
GGGAAAAACT TTGTGCCTAG ACAGGATGAT TTCCTGGTCA GTAAACCAGT GAGGCAGCAT 
CTACAGAAAT ACGACAAACA GCTGAAAAGA TTTGAGGTCT CCAAAGCCCT GGACACTGCG 
CTTGAGACAT GGACGCGAAC TACTAAACCA GAGGTGACGG TCGCAGTAAT AATGGAGCTG 
AACCGCAGAG GAACACTGAA AAACGCCCTC GCTGGGCGAG ATGAAGTGAG CTTAACCAAG 
ATACTCAACT TTCTTCTCAA GCACATCACC GACCCGCGCT TCTCTCGGCC TCTGCTCACA 
GTCGGGGATA TTGTTCTGGA TCTGTATCAG CAGGTTATTC CCCAGTCACC TGTGGTGGAG 
CGCCTGCTGC AGCGTCTTTA TGAGATTTTG GGTCGAGAAG CAGAACTTCA ACAGGAGCTT 
CTGCAGGTTT TGGGAATCCT GGACACACTT TTTGCCTCCC TGATGCCCAG AAAAGAGGTT 
GCAAGTTTTG GCGCGGCAGC AGCAGCGCAG GAGTCCCAGC TACAGGCTGC CTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_005159039.1
CDS	175..1728
Translation	MASFKPTKVLSYPKLGEKVTEETLYWKNYKPPVQIKEFGAVSKIDFSPLPPHNYAVTASTRVHIYGLHSQEPIRNFTRFHDTAYGGSFRGDGKLLVAGSEEGLIRLFDIGGRVSLRQFKGHSKAVHATSFLSDGFRVLSGSDDLTCRVWDVASAVELSSITEHTDYIRAIAPSKLNPDVFVTGSYDHTVKMFDVRSGNSVMTMQHGQPVECVLLYPSEALLVSTGGRYVKVWDLLKGGQQLVSLKNHHKTVTCACLSSSNKLLTASLDRHVKVYNSSYKVVHNFDCASSILSLAVAPDDEAVAVGMTNGVLSIRHRKHKEEKEALTGRRKRGPSYRFFVKGKNFVPRQDDFLVSKPVRQHLQKYDKQLKRFEVSKALDTALETWTRTTKPEVTVAVIMELNRRGTLKNALAGRDEVSLTKILNFLLKHITDPRFSRPLLTVGDIVLDLYQQVIPQSPVVERLLQRLYEILGREAELQQELLQVLGILDTLFASLMPRKEVASFGAAAAAQESQLQAA

Target ORF information:

RefSeq Version	XM_005158982.3
Organism	Danio rerio(Zebrafish)
Definition	Danio rerio utp15, U3 small nucleolar ribonucleoprotein, homolog (utp15), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_005158982.3

ORF Insert Sequence:

ATGGCTTCGT TCAAACCCAC CAAAGTCCTG AGCTATCCTA AACTAGGAGA GAAAGTGACA 
GAAGAAACAC TGTACTGGAA AAACTACAAG CCTCCTGTAC AGATTAAAGA GTTTGGCGCT 
GTATCAAAGA TCGACTTCTC TCCTCTTCCA CCTCACAATT ATGCCGTCAC GGCCTCCACC 
AGAGTCCACA TATATGGACT TCACTCTCAA GAGCCCATTC GAAACTTCAC GCGGTTCCAT 
GATACGGCAT ATGGTGGGAG TTTCAGAGGA GATGGAAAAC TTTTAGTGGC AGGAAGTGAG 
GAGGGACTGA TCCGACTGTT CGACATCGGG GGTCGAGTGT CTCTCAGACA GTTCAAAGGA 
CACTCCAAAG CGGTGCATGC CACCTCGTTC CTGTCTGATG GTTTTCGTGT GCTGTCGGGT 
TCAGATGACC TGACGTGTCG TGTGTGGGAC GTCGCCAGTG CCGTTGAGCT CAGTTCAATC 
ACAGAACACA CTGATTATAT CAGAGCCATT GCTCCCAGCA AACTCAACCC AGACGTGTTT 
GTCACTGGTT CGTATGACCA CACAGTGAAA ATGTTCGACG TGCGCTCTGG AAACAGTGTG 
ATGACAATGC AGCATGGTCA GCCTGTGGAG TGTGTGCTGC TGTACCCGTC TGAGGCTCTG 
CTGGTGTCCA CAGGAGGGCG CTATGTAAAA GTTTGGGACC TGTTGAAAGG TGGACAGCAG 
CTTGTTTCTC TTAAAAATCA TCATAAAACA GTAACCTGTG CATGTCTGAG TTCAAGCAAC 
AAACTGCTGA CAGCATCACT GGACCGGCAC GTCAAAGTAT ATAACTCATC CTATAAGGTT 
GTGCATAATT TTGACTGTGC GTCATCTATT CTCAGTCTGG CTGTTGCGCC TGATGATGAA 
GCAGTCGCTG TAGGAATGAC CAATGGTGTG TTGAGCATCA GACACAGGAA ACACAAAGAA 
GAGAAAGAAG CTTTAACAGG TCGAAGGAAA CGCGGTCCGT CGTACCGCTT CTTTGTTAAG 
GGGAAAAACT TTGTGCCTAG ACAGGATGAT TTCCTGGTCA GTAAACCAGT GAGGCAGCAT 
CTACAGAAAT ACGACAAACA GCTGAAAAGA TTTGAGGTCT CCAAAGCCCT GGACACTGCG 
CTTGAGACAT GGACGCGAAC TACTAAACCA GAGGTGACGG TCGCAGTAAT AATGGAGCTG 
AACCGCAGAG GAACACTGAA AAACGCCCTC GCTGGGCGAG ATGAAGTGAG CTTAACCAAG 
ATACTCAACT TTCTTCTCAA GCACATCACC GACCCGCGCT TCTCTCGGCC TCTGCTCACA 
GTCGGGGATA TTGTTCTGGA TCTGTATCAG CAGGTTATTC CCCAGTCACC TGTGGTGGAG 
CGCCTGCTGC AGCGTCTTTA TGAGATTTTG GGTCGAGAAG CAGAACTTCA ACAGGAGCTT 
CTGCAGGTTT TGGGAATCCT GGACACACTT TTTGCCTCCC TGATGCCCAG AAAAGAGGTT 
GCAAGTTTTG GCGCGGCAGC AGCAGCGCAG GAGTCCCAGC TACAGGCTGC CTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

Mutation in utp15 disrupts vascular patterning in a p53-dependent manner in zebrafish embryos.
PloS one6(9)e25013(2011)
Mouillesseaux K,Chen JN

Hematopoietic gene expression profile in zebrafish kidney marrow.
Proceedings of the National Academy of Sciences of the United States of America101(46)16240-5(2004 Nov)
Song HD,Sun XJ,Deng M,Zhang GW,Zhou Y,Wu XY,Sheng Y,Chen Y,Ruan Z,Jiang CL,Fan HY,Zon LI,Kanki JP,Liu TX,Look AT,Chen Z

Identification of 315 genes essential for early zebrafish development.
Proceedings of the National Academy of Sciences of the United States of America101(35)12792-7(2004 Aug)
Amsterdam A,Nissen RM,Sun Z,Swindell EC,Farrington S,Hopkins N

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utp15 cDNA ORF clone, Danio rerio(zebrafish)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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