ORF » Species Summary » Danio rerio » tspan17 cDNA ORF clone

tspan17 cDNA ORF clone, Danio rerio(zebrafish)

The following tspan17 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the tspan17 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
ODa30429 NM_001123045.1
Latest version!		 Danio rerio tetraspanin 17 (tspan17), mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $174.30
$249.00
ODa148712 XM_021480978.1
Latest version!		 Danio rerio tetraspanin 17 (tspan17), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $174.30
$249.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    tspan17 ( NM_001123045.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001116517.1 Danio rerio tetraspanin 17 (tspan17), mRNA.
    Price & Availability↑
    CloneID ODa30429
    Clone ID Related Accession (Same CDS sequence) NM_001123045.1
    Accession Version NM_001123045.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 813bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-06-26
    Organism Danio rerio(zebrafish)
    Product tetraspanin-17
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC160601.1. ##Evidence-Data-START## Transcript exon combination :: BC160601.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350] ##Evidence-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    ATGAGCAGAA AACAGCATCA CTTTAAAGGA GCAGAGGTCA GCTGCTGTGT CAAATACTTC 
    TTATTTGGGT TCAACATCAT ATTTTGGTTG CTGGGAGCTG CATTCCTGGG TATTGGACTT 
    TGGGCCTGGG CAGAAAAGGG AGTGCTGTCC AACATTTCCT CCATCACAGA TCTGGGCGGC 
    TTCGACCCCG TCTGGCTCTT CATCGTTGTG GGAGGGGTGA TGTTCATCCT GGGGTTTGCA 
    GGATGCATCG GTGCGCTGCG GGAGAACACT TTCCTGCTTA AATTTTTTTC AGTGTTTCTG 
    GGCCTCATCT TCTTCCTGGA GCTCACTGCT GGCATTTTAG CCTTCGTCTT TAAAGACTGG 
    ATCAAAGACC AGCTGAACTT CTTCATCAAC AACAATGTTA AAGCATATCG GGACGACATT 
    GACCTGCAGA ACCTCATTGA CTTTGCTCAA GAATACTGGT CGTGTTGTGG TGCTCATGGA 
    CCGAATGATT GGAACCTGAA CATCTATTTT AACTGCACCG ACTTCAACCC GAGCCGGGAA 
    AGGTGTGGTG TTCCTTTCTC CTGTTGCGTC AAAGATCCTG CTGAGGATGT GCTGAATACA 
    CAGTGTGGAT ATGATGTGCG GCTTCAAGTG GAGTTGGATC AGCAGAAGTA CATTTATACC 
    AAAGGCTGCG TGGGACAGTT TGAAAAGTGG CTTCAGGACA ATCTGATTGT TGTTGCTGGG 
    GTGTTTGTGG GGATTGCATT ATTACAGATC TTTGGCATCT GTCTGGCTCA GAATTTGGTG 
    AGTGACATCA GAGCGGTCAA AGCCAACTGG TGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq NP_001116517.1
    CDS347..1159
    Translation

    Target ORF information:

    RefSeq Version NM_001123045.1
    Organism Danio rerio(zebrafish)
    Definition Danio rerio tetraspanin 17 (tspan17), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 NM_001123045.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    ATGAGCAGAA AACAGCATCA CTTTAAAGGA GCAGAGGTCA GCTGCTGTGT CAAATACTTC 
    TTATTTGGGT TCAACATCAT ATTTTGGTTG CTGGGAGCTG CATTCCTGGG TATTGGACTT 
    TGGGCCTGGG CAGAAAAGGG AGTGCTGTCC AACATTTCCT CCATCACAGA TCTGGGCGGC 
    TTCGACCCCG TCTGGCTCTT CATCGTTGTG GGAGGGGTGA TGTTCATCCT GGGGTTTGCA 
    GGATGCATCG GTGCGCTGCG GGAGAACACT TTCCTGCTTA AATTTTTTTC AGTGTTTCTG 
    GGCCTCATCT TCTTCCTGGA GCTCACTGCT GGCATTTTAG CCTTCGTCTT TAAAGACTGG 
    ATCAAAGACC AGCTGAACTT CTTCATCAAC AACAATGTTA AAGCATATCG GGACGACATT 
    GACCTGCAGA ACCTCATTGA CTTTGCTCAA GAATACTGGT CGTGTTGTGG TGCTCATGGA 
    CCGAATGATT GGAACCTGAA CATCTATTTT AACTGCACCG ACTTCAACCC GAGCCGGGAA 
    AGGTGTGGTG TTCCTTTCTC CTGTTGCGTC AAAGATCCTG CTGAGGATGT GCTGAATACA 
    CAGTGTGGAT ATGATGTGCG GCTTCAAGTG GAGTTGGATC AGCAGAAGTA CATTTATACC 
    AAAGGCTGCG TGGGACAGTT TGAAAAGTGG CTTCAGGACA ATCTGATTGT TGTTGCTGGG 
    GTGTTTGTGG GGATTGCATT ATTACAGATC TTTGGCATCT GTCTGGCTCA GAATTTGGTG 
    AGTGACATCA GAGCGGTCAA AGCCAACTGG TGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    tspan17 ( XM_021480978.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_021336653.1 Danio rerio tetraspanin 17 (tspan17), transcript variant X1, mRNA.
    Price & Availability↑
    CloneID ODa148712
    Clone ID Related Accession (Same CDS sequence) XM_021480978.1
    Accession Version XM_021480978.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 834bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2017-06-14
    Organism Danio rerio(zebrafish)
    Product tetraspanin-17 isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007125.7) and transcript sequence (BC160601.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## assembly gap :: added 71 transcript bases to patch genome assembly gap ##RefSeq-Attributes-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    ATGAATCGTG GCCTGGACAA AATGAGCAGA AAACAGCATC ACTTTAAAGG AGCAGAGGTC 
    AGCTGCTGTG TCAAATACTT CTTATTTGGG TTCAACATCA TATTTTGGTT GCTGGGAGCT 
    GCATTCCTGG GTATTGGACT TTGGGCCTGG GCAGAAAAGG GAGTGCTGTC CAACATTTCC 
    TCCATCACAG ATCTGGGCGG CTTCGACCCC GTCTGGCTCT TCATCGTTGT GGGAGGGGTG 
    ATGTTCATCC TGGGGTTTGC AGGATGCATC GGTGCGCTGC GGGAGAACAC TTTCCTGCTT 
    AAATTTTTTT CAGTGTTTCT GGGCCTCATC TTCTTCCTGG AGCTCACTGC TGGCATTTTA 
    GCCTTCGTCT TTAAAGACTG GATCAAAGAC CAGCTGAACT TCTTCATCAA CAACAATGTT 
    AAAGCATATC GGGACGACAT TGACCTCCAG AACCTCATTG ACTTTGCTCA AGAATATTGG 
    TCGTGTTGTG GTGCTCATGG ACCGAATGAT TGGAACCTGA ACATCTATTT CAACTGCACC 
    GACTTCAACC CGAGCCGGGA AAGGTGTGGT GTTCCCTTCT CCTGTTGCGT CAAAGACCCT 
    GCTGAGGATG TGCTGAATAC ACAGTGTGGA TATGATGTGC GGCTTCAAGT GGAGTTGGAT 
    CAGCAGAAGT ACATTTACAC CAAAGGCTGC GTGGGACAGT TTGAAAAGTG GCTTCAGGAC 
    AATCTGATTG TTGTTGCTGG GGTGTTTGTG GGGATTGCAT TATTACAGAT CTTTGGCATC 
    TGTCTGGCTC AGAATTTGGT GAGTGACATC AGAGCGGTCA AAGCCAACTG GTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_021336653.1
    CDS387..1220
    Translation

    Target ORF information:

    RefSeq Version XM_021480978.1
    Organism Danio rerio(zebrafish)
    Definition Danio rerio tetraspanin 17 (tspan17), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_021480978.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    ATGAATCGTG GCCTGGACAA AATGAGCAGA AAACAGCATC ACTTTAAAGG AGCAGAGGTC 
    AGCTGCTGTG TCAAATACTT CTTATTTGGG TTCAACATCA TATTTTGGTT GCTGGGAGCT 
    GCATTCCTGG GTATTGGACT TTGGGCCTGG GCAGAAAAGG GAGTGCTGTC CAACATTTCC 
    TCCATCACAG ATCTGGGCGG CTTCGACCCC GTCTGGCTCT TCATCGTTGT GGGAGGGGTG 
    ATGTTCATCC TGGGGTTTGC AGGATGCATC GGTGCGCTGC GGGAGAACAC TTTCCTGCTT 
    AAATTTTTTT CAGTGTTTCT GGGCCTCATC TTCTTCCTGG AGCTCACTGC TGGCATTTTA 
    GCCTTCGTCT TTAAAGACTG GATCAAAGAC CAGCTGAACT TCTTCATCAA CAACAATGTT 
    AAAGCATATC GGGACGACAT TGACCTCCAG AACCTCATTG ACTTTGCTCA AGAATATTGG 
    TCGTGTTGTG GTGCTCATGG ACCGAATGAT TGGAACCTGA ACATCTATTT CAACTGCACC 
    GACTTCAACC CGAGCCGGGA AAGGTGTGGT GTTCCCTTCT CCTGTTGCGT CAAAGACCCT 
    GCTGAGGATG TGCTGAATAC ACAGTGTGGA TATGATGTGC GGCTTCAAGT GGAGTTGGAT 
    CAGCAGAAGT ACATTTACAC CAAAGGCTGC GTGGGACAGT TTGAAAAGTG GCTTCAGGAC 
    AATCTGATTG TTGTTGCTGG GGTGTTTGTG GGGATTGCAT TATTACAGAT CTTTGGCATC 
    TGTCTGGCTC AGAATTTGGT GAGTGACATC AGAGCGGTCA AAGCCAACTG GTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
    BMC genomics17368(2016 05)
    Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J


    The African coelacanth genome provides insights into tetrapod evolution.
    Nature496(7445)311-6(2013 Apr)
    Amemiya CT,Alf?ldi J,Lee AP,Fan S,Philippe H,Maccallum I,Braasch I,Manousaki T,Schneider I,Rohner N,Organ C,Chalopin D,Smith JJ,Robinson M,Dorrington RA,Gerdol M,Aken B,Biscotti MA,Barucca M,Baurain D,Berlin AM,Blatch GL,Buonocore F,Burmester T,Campbell MS,Canapa A,Cannon JP,Christoffels A,De Moro G,Edkins AL,Fan L,Fausto AM,Feiner N,Forconi M,Gamieldien J,Gnerre S,Gnirke A,Goldstone JV,Haerty W,Hahn ME,Hesse U,Hoffmann S,Johnson J,Karchner SI,Kuraku S,Lara M,Levin JZ,Litman GW,Mauceli E,Miyake T,Mueller MG,Nelson DR,Nitsche A,Olmo E,Ota T,Pallavicini A,Panji S,Picone B,Ponting CP,Prohaska SJ,Przybylski D,Saha NR,Ravi V,Ribeiro FJ,Sauka-Spengler T,Scapigliati G,Searle SM,Sharpe T,Simakov O,Stadler PF,Stegeman JJ,Sumiyama K,Tabbaa D,Tafer H,Turner-Maier J,van Heusden P,White S,Williams L,Yandell M,Brinkmann H,Volff JN,Tabin CJ,Shubin N,Schartl M,Jaffe DB,Postlethwait JH,Venkatesh B,Di Palma F,Lander ES,Meyer A,Lindblad-Toh K


    Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.
    Proceedings of the National Academy of Sciences of the United States of America99(26)16899-903(2002 Dec)
    Strausberg RL,Feingold EA,Grouse LH,Derge JG,Klausner RD,Collins FS,Wagner L,Shenmen CM,Schuler GD,Altschul SF,Zeeberg B,Buetow KH,Schaefer CF,Bhat NK,Hopkins RF,Jordan H,Moore T,Max SI,Wang J,Hsieh F,Diatchenko L,Marusina K,Farmer AA,Rubin GM,Hong L,Stapleton M,Soares MB,Bonaldo MF,Casavant TL,Scheetz TE,Brownstein MJ,Usdin TB,Toshiyuki S,Carninci P,Prange C,Raha SS,Loquellano NA,Peters GJ,Abramson RD,Mullahy SJ,Bosak SA,McEwan PJ,McKernan KJ,Malek JA,Gunaratne PH,Richards S,Worley KC,Hale S,Garcia AM,Gay LJ,Hulyk SW,Villalon DK,Muzny DM,Sodergren EJ,Lu X,Gibbs RA,Fahey J,Helton E,Ketteman M,Madan A,Rodrigues S,Sanchez A,Whiting M,Madan A,Young AC,Shevchenko Y,Bouffard GG,Blakesley RW,Touchman JW,Green ED,Dickson MC,Rodriguez AC,Grimwood J,Schmutz J,Myers RM,Butterfield YS,Krzywinski MI,Skalska U,Smailus DE,Schnerch A,Schein JE,Jones SJ,Marra MA,


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