ORF » Species Summary » Danio rerio » hoxd3a cDNA ORF clone

hoxd3a cDNA ORF clone, Danio rerio(zebrafish)

The following hoxd3a gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the hoxd3a cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
ODa02885 NM_131125.1
Latest version!		 Danio rerio homeobox D3a (hoxd3a), mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $258.30
$369.00
ODa02885 XM_021478602.1
Latest version!		 Danio rerio homeobox D3a (hoxd3a), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $258.30
$369.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    hoxd3a ( NM_131125.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_571200.1 Danio rerio homeobox D3a (hoxd3a), mRNA.
    Price & Availability↑
    CloneID ODa02885
    Clone ID Related Accession (Same CDS sequence) NM_131125.1 , XM_021478602.1
    Accession Version NM_131125.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1191bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-11-23
    Organism Danio rerio(zebrafish)
    Product homeobox protein Hox-D3a
    Comment Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BX322661.17. On Mar 22, 2009 this sequence version replaced XM_001922716.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: EL647436.1, DQ060564.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    ATGCAGAAAG CCACTTATTA TGACAATGCT GGACTTTTCG GAGGATATTC GTACCCTAAA 
    TCTGACTCCT ACACGTACGG TCCAACACAC CAGGGCTTCT CATCCTCCAG TATAGAGAAT 
    GACTATCAAA GCCCAATTTG TCCAATTCAA ACTACATCAG TCCGGCAAGC AACCCATAAA 
    AACGGAGACA TCAATGGCAG TTGTATGCGA CCAAGTGCCA GTCAGGGCAA CAGTCAGCCA 
    GAGAGTATCA GTGAGCAGCA GCAGGCTGCT CCATTAGCGG CCAGCTCTCC CAGCCCCAGC 
    ACTAACTCCA CACAAAAAAA GAAATCCCCC AGCTCTAATG GATCCAGCAC TGCCACCCCA 
    GTCATCTCCA AGCAAATTTT CCCCTGGATG AAAGAGACCC GCCAAAATGC AAAGCAGAAA 
    AGCACCAACT GCCCAGCAGC AGGAGAAACC TGCGATGACA AGAGTCCGCC TGGCCCTGCG 
    TCGAAACGAG TGCGCACTGC CTACACCAGC GCCCAGCTAG TCGAGCTGGA GAAGGAGTTT 
    CATTTCAACC GCTACCTGTG TCGCCCCAGA AGAGTGGAGA TGGCCAATCT GCTCAACCTC 
    ACCGAGCGCC AAATAAAGAT CTGGTTTCAA AACAGAAGGA TGAAGTACAA AAAAGATCAG 
    AAATCTAAAG GCATAATGCA CTCTCCCTTA GGACACTCTC CGGACAGGAG CCCGCCGTTA 
    AGTGGCTCGA ATCACATTGG ATATTCTGGT CAGCTTCCGA ACGTAAACAG CCTCAGCTAC 
    GACGCGCCGT CGCCTCCGTC ATTCGCCAAG CCGCAGCAGA ATATATACGG CTTGGCGGCA 
    TACACGGCGC CATTGGGCGG CTGCATACCG CAGCAGAAAA GGTACCCGGG AACAGAGTAC 
    GACCACCACA GCATGCAGGG GAACGGTAGC TTTGCTAATG CTAATTTACA AAGTAGCCCC 
    GTGTACGTCG GGGGAAACTT CGTTGATTCA ATGCCAGCCT CCGGCCCCAT GTTCAACCTC 
    GGTCATCTTC CCCATCCCTC ATCCGCTAGT GTGGACTACA GCTGTGCCGC TCAGATTCCG 
    GGTAACCACC ACCACGGACC GTGTGACCCC CACCCCACAT ACACAGACCT CAGCTCTCAT 
    CATGCGTCTC AGGGAAGGCT GCAGGATGCG CCCAAACTCA CGCACCTGTA A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq NP_571200.1
    CDS1..1191
    Translation

    Target ORF information:

    RefSeq Version NM_131125.1
    Organism Danio rerio(zebrafish)
    Definition Danio rerio homeobox D3a (hoxd3a), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 NM_131125.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    ATGCAGAAAG CCACTTATTA TGACAATGCT GGACTTTTCG GAGGATATTC GTACCCTAAA 
    TCTGACTCCT ACACGTACGG TCCAACACAC CAGGGCTTCT CATCCTCCAG TATAGAGAAT 
    GACTATCAAA GCCCAATTTG TCCAATTCAA ACTACATCAG TCCGGCAAGC AACCCATAAA 
    AACGGAGACA TCAATGGCAG TTGTATGCGA CCAAGTGCCA GTCAGGGCAA CAGTCAGCCA 
    GAGAGTATCA GTGAGCAGCA GCAGGCTGCT CCATTAGCGG CCAGCTCTCC CAGCCCCAGC 
    ACTAACTCCA CACAAAAAAA GAAATCCCCC AGCTCTAATG GATCCAGCAC TGCCACCCCA 
    GTCATCTCCA AGCAAATTTT CCCCTGGATG AAAGAGACCC GCCAAAATGC AAAGCAGAAA 
    AGCACCAACT GCCCAGCAGC AGGAGAAACC TGCGATGACA AGAGTCCGCC TGGCCCTGCG 
    TCGAAACGAG TGCGCACTGC CTACACCAGC GCCCAGCTAG TCGAGCTGGA GAAGGAGTTT 
    CATTTCAACC GCTACCTGTG TCGCCCCAGA AGAGTGGAGA TGGCCAATCT GCTCAACCTC 
    ACCGAGCGCC AAATAAAGAT CTGGTTTCAA AACAGAAGGA TGAAGTACAA AAAAGATCAG 
    AAATCTAAAG GCATAATGCA CTCTCCCTTA GGACACTCTC CGGACAGGAG CCCGCCGTTA 
    AGTGGCTCGA ATCACATTGG ATATTCTGGT CAGCTTCCGA ACGTAAACAG CCTCAGCTAC 
    GACGCGCCGT CGCCTCCGTC ATTCGCCAAG CCGCAGCAGA ATATATACGG CTTGGCGGCA 
    TACACGGCGC CATTGGGCGG CTGCATACCG CAGCAGAAAA GGTACCCGGG AACAGAGTAC 
    GACCACCACA GCATGCAGGG GAACGGTAGC TTTGCTAATG CTAATTTACA AAGTAGCCCC 
    GTGTACGTCG GGGGAAACTT CGTTGATTCA ATGCCAGCCT CCGGCCCCAT GTTCAACCTC 
    GGTCATCTTC CCCATCCCTC ATCCGCTAGT GTGGACTACA GCTGTGCCGC TCAGATTCCG 
    GGTAACCACC ACCACGGACC GTGTGACCCC CACCCCACAT ACACAGACCT CAGCTCTCAT 
    CATGCGTCTC AGGGAAGGCT GCAGGATGCG CCCAAACTCA CGCACCTGTA A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    hoxd3a ( XM_021478602.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_021334277.1 Danio rerio homeobox D3a (hoxd3a), transcript variant X1, mRNA.
    Price & Availability↑
    CloneID ODa02885
    Clone ID Related Accession (Same CDS sequence) NM_131125.1 , XM_021478602.1
    Accession Version XM_021478602.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1191bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2017-06-14
    Organism Danio rerio(zebrafish)
    Product homeobox protein Hox-D3a isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007120.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    ATGCAGAAAG CCACTTATTA TGACAATGCT GGACTTTTCG GAGGATATTC GTACCCTAAA 
    TCTGACTCCT ACACGTACGG TCCAACACAC CAGGGCTTCT CATCCTCCAG TATAGAGAAT 
    GACTATCAAA GCCCAATTTG TCCAATTCAA ACTACATCAG TCCGGCAAGC AACCCATAAA 
    AACGGAGACA TCAATGGCAG TTGTATGCGA CCAAGTGCCA GTCAGGGCAA CAGTCAGCCA 
    GAGAGTATCA GTGAGCAGCA GCAGGCTGCT CCATTAGCGG CCAGCTCTCC CAGCCCCAGC 
    ACTAACTCCA CACAAAAAAA GAAATCCCCC AGCTCTAATG GATCCAGCAC TGCCACCCCA 
    GTCATCTCCA AGCAAATTTT CCCCTGGATG AAAGAGACCC GCCAAAATGC AAAGCAGAAA 
    AGCACCAACT GCCCAGCAGC AGGAGAAACC TGCGATGACA AGAGTCCGCC TGGCCCTGCG 
    TCGAAACGAG TGCGCACTGC CTACACCAGC GCCCAGCTAG TCGAGCTGGA GAAGGAGTTT 
    CATTTCAACC GCTACCTGTG TCGCCCCAGA AGAGTGGAGA TGGCCAATCT GCTCAACCTC 
    ACCGAGCGCC AAATAAAGAT CTGGTTTCAA AACAGAAGGA TGAAGTACAA AAAAGATCAG 
    AAATCTAAAG GCATAATGCA CTCTCCCTTA GGACACTCTC CGGACAGGAG CCCGCCGTTA 
    AGTGGCTCGA ATCACATTGG ATATTCTGGT CAGCTTCCGA ACGTAAACAG CCTCAGCTAC 
    GACGCGCCGT CGCCTCCGTC ATTCGCCAAG CCGCAGCAGA ATATATACGG CTTGGCGGCA 
    TACACGGCGC CATTGGGCGG CTGCATACCG CAGCAGAAAA GGTACCCGGG AACAGAGTAC 
    GACCACCACA GCATGCAGGG GAACGGTAGC TTTGCTAATG CTAATTTACA AAGTAGCCCC 
    GTGTACGTCG GGGGAAACTT CGTTGATTCA ATGCCAGCCT CCGGCCCCAT GTTCAACCTC 
    GGTCATCTTC CCCATCCCTC ATCCGCTAGT GTGGACTACA GCTGTGCCGC TCAGATTCCG 
    GGTAACCACC ACCACGGACC GTGTGACCCC CACCCCACAT ACACAGACCT CAGCTCTCAT 
    CATGCGTCTC AGGGAAGGCT GCAGGATGCG CCCAAACTCA CGCACCTGTA A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_021334277.1
    CDS627..1817
    Translation

    Target ORF information:

    RefSeq Version XM_021478602.1
    Organism Danio rerio(zebrafish)
    Definition Danio rerio homeobox D3a (hoxd3a), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_021478602.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    ATGCAGAAAG CCACTTATTA TGACAATGCT GGACTTTTCG GAGGATATTC GTACCCTAAA 
    TCTGACTCCT ACACGTACGG TCCAACACAC CAGGGCTTCT CATCCTCCAG TATAGAGAAT 
    GACTATCAAA GCCCAATTTG TCCAATTCAA ACTACATCAG TCCGGCAAGC AACCCATAAA 
    AACGGAGACA TCAATGGCAG TTGTATGCGA CCAAGTGCCA GTCAGGGCAA CAGTCAGCCA 
    GAGAGTATCA GTGAGCAGCA GCAGGCTGCT CCATTAGCGG CCAGCTCTCC CAGCCCCAGC 
    ACTAACTCCA CACAAAAAAA GAAATCCCCC AGCTCTAATG GATCCAGCAC TGCCACCCCA 
    GTCATCTCCA AGCAAATTTT CCCCTGGATG AAAGAGACCC GCCAAAATGC AAAGCAGAAA 
    AGCACCAACT GCCCAGCAGC AGGAGAAACC TGCGATGACA AGAGTCCGCC TGGCCCTGCG 
    TCGAAACGAG TGCGCACTGC CTACACCAGC GCCCAGCTAG TCGAGCTGGA GAAGGAGTTT 
    CATTTCAACC GCTACCTGTG TCGCCCCAGA AGAGTGGAGA TGGCCAATCT GCTCAACCTC 
    ACCGAGCGCC AAATAAAGAT CTGGTTTCAA AACAGAAGGA TGAAGTACAA AAAAGATCAG 
    AAATCTAAAG GCATAATGCA CTCTCCCTTA GGACACTCTC CGGACAGGAG CCCGCCGTTA 
    AGTGGCTCGA ATCACATTGG ATATTCTGGT CAGCTTCCGA ACGTAAACAG CCTCAGCTAC 
    GACGCGCCGT CGCCTCCGTC ATTCGCCAAG CCGCAGCAGA ATATATACGG CTTGGCGGCA 
    TACACGGCGC CATTGGGCGG CTGCATACCG CAGCAGAAAA GGTACCCGGG AACAGAGTAC 
    GACCACCACA GCATGCAGGG GAACGGTAGC TTTGCTAATG CTAATTTACA AAGTAGCCCC 
    GTGTACGTCG GGGGAAACTT CGTTGATTCA ATGCCAGCCT CCGGCCCCAT GTTCAACCTC 
    GGTCATCTTC CCCATCCCTC ATCCGCTAGT GTGGACTACA GCTGTGCCGC TCAGATTCCG 
    GGTAACCACC ACCACGGACC GTGTGACCCC CACCCCACAT ACACAGACCT CAGCTCTCAT 
    CATGCGTCTC AGGGAAGGCT GCAGGATGCG CCCAAACTCA CGCACCTGTA A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

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