ORF » Species Summary » Danio rerio » SHHA cDNA ORF clone

SHHA cDNA ORF clone, Danio rerio(Zebrafish)

  • Gene

  • Clones

  • gRNAs

The following SHHA gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the SHHA cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
ODa02261 NM_131063.3
Latest version!		 Danio rerio sonic hedgehog signaling molecule a (shha), mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $258.30
$369.00
ODa39205 XM_009303382.2
Latest version!		 Danio rerio sonic hedgehog a (shha), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $174.30
$249.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    SHHA ( NM_131063.3 ) cDNA ORF clone, Danio rerio(Zebrafish) -> NP_571138.1 Danio rerio sonic hedgehog signaling molecule a (shha), mRNA.
    Price & Availability↑
    CloneID ODa02261
    Clone ID Related Accession (Same CDS sequence) NM_131063.3
    Accession Version NM_131063.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1257bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2020-01-04
    Organism Danio rerio(zebrafish)
    Product sonic hedgehog protein A precursor
    Comment Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from L27585.1, CU041319.16 and CT668143.2. On Jun 11, 2014 this sequence version replaced NM_131063.2. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: L27585.1, BC162395.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    ATGCGGCTTT TGACGAGAGT GCTGCTGGTG TCTCTTCTCA CTCTGTCCTT GGTGGTGTCC 
    GGACTGGCCT GCGGTCCTGG CAGAGGCTAC GGCAGAAGAA GACATCCGAA GAAGCTGACA 
    CCTCTCGCCT ACAAGCAGTT CATACCTAAT GTCGCGGAGA AGACCTTAGG GGCCAGCGGC 
    AGATACGAGG GCAAGATAAC GCGCAATTCG GAGAGATTTA AAGAACTTAC TCCAAATTAT 
    AATCCCGACA TTATCTTTAA GGATGAGGAG AACACGGGAG CGGACAGGCT CATGACACAG 
    AGATGCAAAG ACAAGCTGAA CTCGCTGGCC ATCTCTGTAA TGAACCACTG GCCAGGGGTT 
    AAGCTGCGTG TGACAGAGGG CTGGGATGAG GACGGTCACC ATTTTGAAGA ATCACTCCAC 
    TACGAGGGAA GAGCTGTTGA TATTACCACC TCTGACCGAG ACAAGAGCAA ATACGGGACA 
    CTGTCTCGCC TAGCTGTGGA GGCTGGATTT GACTGGGTCT ATTACGAGTC CAAAGCCCAC 
    ATTCATTGCT CTGTCAAAGC AGAAAATTCG GTTGCTGCGA AATCTGGGGG CTGTTTCCCA 
    GGTTCGGCTC TGGTCTCGCT CCAGGACGGA GGACAGAAGG CCGTGAAGGA CCTGAACCCC 
    GGAGACAAGG TGCTGGCGGC AGACAGCGCG GGAAACCTGG TGTTCAGCGA CTTCATCATG 
    TTCACAGACC GAGACTCCAC GACGCGACGT GTGTTTTACG TCATAGAAAC GCAAGAACCC 
    GTTGAAAAGA TCACCCTCAC CGCCGCTCAC CTCCTTTTTG TCCTCGACAA CTCAACGGAA 
    GATCTCCACA CCATGACCGC CGCGTATGCC AGCAGTGTCA GAGCCGGACA AAAGGTGATG 
    GTTGTTGATG ATAGCGGCCA GCTTAAATCT GTCATCGTGC AGCGGATATA CACGGAGGAG 
    CAGCGGGGCT CGTTCGCACC AGTGACTGCA CATGGGACCA TTGTGGTCGA CAGAATACTG 
    GCGTCCTGTT ACGCCGTAAT AGAGGACCAG GGGCTTGCGC ATTTGGCCTT CGCGCCCGCC 
    AGGCTGTATT ATTACGTGTC ATCATTCCTG TTCCCCCAAA ACTCCAGCAG TCGGTCCAAT 
    GCGACTTTAC AACAGGAGGG GGTCCACTGG TACTCCAGGC TCCTGTATCA AATGGGAACG 
    TGGCTTTTGG ACAGCAACAT GCTTCATCCT TTGGGGATGT CAGTAAACTC AAGCTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq NP_571138.1
    CDS320..1576
    Translation

    Target ORF information:

    RefSeq Version NM_131063.3
    Organism Danio rerio(zebrafish)
    Definition Danio rerio sonic hedgehog signaling molecule a (shha), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 NM_131063.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    ATGCGGCTTT TGACGAGAGT GCTGCTGGTG TCTCTTCTCA CTCTGTCCTT GGTGGTGTCC 
    GGACTGGCCT GCGGTCCTGG CAGAGGCTAC GGCAGAAGAA GACATCCGAA GAAGCTGACA 
    CCTCTCGCCT ACAAGCAGTT CATACCTAAT GTCGCGGAGA AGACCTTAGG GGCCAGCGGC 
    AGATACGAGG GCAAGATAAC GCGCAATTCG GAGAGATTTA AAGAACTTAC TCCAAATTAT 
    AATCCCGACA TTATCTTTAA GGATGAGGAG AACACGGGAG CGGACAGGCT CATGACACAG 
    AGATGCAAAG ACAAGCTGAA CTCGCTGGCC ATCTCTGTAA TGAACCACTG GCCAGGGGTT 
    AAGCTGCGTG TGACAGAGGG CTGGGATGAG GACGGTCACC ATTTTGAAGA ATCACTCCAC 
    TACGAGGGAA GAGCTGTTGA TATTACCACC TCTGACCGAG ACAAGAGCAA ATACGGGACA 
    CTGTCTCGCC TAGCTGTGGA GGCTGGATTT GACTGGGTCT ATTACGAGTC CAAAGCCCAC 
    ATTCATTGCT CTGTCAAAGC AGAAAATTCG GTTGCTGCGA AATCTGGGGG CTGTTTCCCA 
    GGTTCGGCTC TGGTCTCGCT CCAGGACGGA GGACAGAAGG CCGTGAAGGA CCTGAACCCC 
    GGAGACAAGG TGCTGGCGGC AGACAGCGCG GGAAACCTGG TGTTCAGCGA CTTCATCATG 
    TTCACAGACC GAGACTCCAC GACGCGACGT GTGTTTTACG TCATAGAAAC GCAAGAACCC 
    GTTGAAAAGA TCACCCTCAC CGCCGCTCAC CTCCTTTTTG TCCTCGACAA CTCAACGGAA 
    GATCTCCACA CCATGACCGC CGCGTATGCC AGCAGTGTCA GAGCCGGACA AAAGGTGATG 
    GTTGTTGATG ATAGCGGCCA GCTTAAATCT GTCATCGTGC AGCGGATATA CACGGAGGAG 
    CAGCGGGGCT CGTTCGCACC AGTGACTGCA CATGGGACCA TTGTGGTCGA CAGAATACTG 
    GCGTCCTGTT ACGCCGTAAT AGAGGACCAG GGGCTTGCGC ATTTGGCCTT CGCGCCCGCC 
    AGGCTGTATT ATTACGTGTC ATCATTCCTG TTCCCCCAAA ACTCCAGCAG TCGGTCCAAT 
    GCGACTTTAC AACAGGAGGG GGTCCACTGG TACTCCAGGC TCCTGTATCA AATGGGAACG 
    TGGCTTTTGG ACAGCAACAT GCTTCATCCT TTGGGGATGT CAGTAAACTC AAGCTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    SHHA ( XM_009303382.2 ) cDNA ORF clone, Danio rerio(Zebrafish) -> XP_009301657.1 Danio rerio sonic hedgehog a (shha), transcript variant X1, mRNA.
    Price & Availability↑
    CloneID ODa39205
    Clone ID Related Accession (Same CDS sequence) XM_009303382.2
    Accession Version XM_009303382.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 918bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2016-06-23
    Organism Danio rerio(Zebrafish)
    Product sonic hedgehog protein A isoform X1
    Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007118.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_009303382.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    ATGAACCACT GGCCAGGGGT TAAGCTGCGT GTGACAGAGG GCTGGGATGA GGACGGTCAC 
    CATTTTGAAG AATCACTCCA CTACGAGGGA AGAGCTGTTG ATATTACCAC CTCTGACCGA 
    GACAAGAGCA AATACGGGAC ACTGTCTCGC CTAGCTGTGG AGGCTGGATT TGACTGGGTC 
    TATTACGAGT CCAAAGCCCA CATTCATTGC TCTGTCAAAG CAGAAAATTC GGTTGCTGCG 
    AAATCTGGGG GCTGTTTCCC AGGTTCGGCT CTGGTCTCGC TCCAGGACGG AGGACAGAAG 
    GCCGTGAAGG ACCTGAACCC CGGAGACAAG GTGCTGGCGG CAGACAGCGC GGGAAACCTG 
    GTGTTCAGCG ACTTCATCAT GTTCACAGAC CGAGACTCCA CGACGCGACG TGTGTTTTAC 
    GTCATAGAAA CGCAAGAACC CGTTGAAAAG ATCACCCTCA CCGCCGCTCA CCTCCTTTTT 
    GTCCTCGACA ACTCAACGGA AGATCTCCAC ACCATGACCG CCGCGTATGC CAGCAGTGTC 
    AGAGCCGGAC AAAAGGTGAT GGTTGTTGAT GATAGCGGCC AGCTTAAATC TGTCATCGTG 
    CAGCGGATAT ACACGGAGGA GCAGCGGGGC TCGTTCGCAC CAGTGACTGC ACATGGGACC 
    ATTGTGGTCG ACAGAATACT GGCGTCCTGT TACGCCGTAA TAGAGGACCA GGGGCTTGCG 
    CATTTGGCCT TCGCGCCCGC CAGGCTGTAT TATTACGTGT CATCATTCCT GTTCCCCCAA 
    AACTCCAGCA GTCGGTCCAA TGCGACTTTA CAACAGGAGG GGGTCCACTG GTACTCCAGG 
    CTCCTGTATC AAATGGGAAC GTGGCTTTTG GACAGCAACA TGCTTCATCC TTTGGGGATG 
    TCAGTAAACT CAAGCTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_009301657.1
    CDS183..1100
    Translation

    Target ORF information:

    RefSeq Version XM_009303382.2
    Organism Danio rerio(Zebrafish)
    Definition Danio rerio sonic hedgehog a (shha), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_009303382.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    ATGAACCACT GGCCAGGGGT TAAGCTGCGT GTGACAGAGG GCTGGGATGA GGACGGTCAC 
    CATTTTGAAG AATCACTCCA CTACGAGGGA AGAGCTGTTG ATATTACCAC CTCTGACCGA 
    GACAAGAGCA AATACGGGAC ACTGTCTCGC CTAGCTGTGG AGGCTGGATT TGACTGGGTC 
    TATTACGAGT CCAAAGCCCA CATTCATTGC TCTGTCAAAG CAGAAAATTC GGTTGCTGCG 
    AAATCTGGGG GCTGTTTCCC AGGTTCGGCT CTGGTCTCGC TCCAGGACGG AGGACAGAAG 
    GCCGTGAAGG ACCTGAACCC CGGAGACAAG GTGCTGGCGG CAGACAGCGC GGGAAACCTG 
    GTGTTCAGCG ACTTCATCAT GTTCACAGAC CGAGACTCCA CGACGCGACG TGTGTTTTAC 
    GTCATAGAAA CGCAAGAACC CGTTGAAAAG ATCACCCTCA CCGCCGCTCA CCTCCTTTTT 
    GTCCTCGACA ACTCAACGGA AGATCTCCAC ACCATGACCG CCGCGTATGC CAGCAGTGTC 
    AGAGCCGGAC AAAAGGTGAT GGTTGTTGAT GATAGCGGCC AGCTTAAATC TGTCATCGTG 
    CAGCGGATAT ACACGGAGGA GCAGCGGGGC TCGTTCGCAC CAGTGACTGC ACATGGGACC 
    ATTGTGGTCG ACAGAATACT GGCGTCCTGT TACGCCGTAA TAGAGGACCA GGGGCTTGCG 
    CATTTGGCCT TCGCGCCCGC CAGGCTGTAT TATTACGTGT CATCATTCCT GTTCCCCCAA 
    AACTCCAGCA GTCGGTCCAA TGCGACTTTA CAACAGGAGG GGGTCCACTG GTACTCCAGG 
    CTCCTGTATC AAATGGGAAC GTGGCTTTTG GACAGCAACA TGCTTCATCC TTTGGGGATG 
    TCAGTAAACT CAAGCTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

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