Gene Symbol | LOC108179059 |
Entrez Gene ID | 108179059 |
Full Name | V-type proton ATPase subunit E 1 |
Synonyms | atp6v1e1 |
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
ORF » Species Summary » Danio rerio » LOC108179059 cDNA ORF clone
Gene Symbol | LOC108179059 |
Entrez Gene ID | 108179059 |
Full Name | V-type proton ATPase subunit E 1 |
Synonyms | atp6v1e1 |
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
mRNA | Protein | Name |
---|---|---|
NM_001365440.1 | NP_001352369.1 | ATPase H+ transporting V1 subunit E1a |
XM_017354179.1 | XP_017209668.1 | V-type proton ATPase subunit E 1 |
Evolution of complexity in the zebrafish synapse proteome.
Bay?s ?, Collins MO, Reig-Viader R, Gou G, Goulding D, Izquierdo A, Choudhary JS, Emes RD, Grant SG
Nature communications814613(2017 Mar)
RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)
The zebrafish mutants for the V-ATPase subunits d, ac45, E, H and c and their variable pigment dilution phenotype.
Ramos-Balderas JL, Carrillo-Rosas S, Guzman A, Navarro RE, Maldonado E
BMC research notes639(2013 Feb)
Pigmentation pathway evolution after whole-genome duplication in fish.
Braasch I, Brunet F, Volff JN, Schartl M
Genome biology and evolution1479-93(2009 Nov)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following LOC108179059 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC108179059 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ODa57889 | |
Clone ID Related Accession (Same CDS sequence) | NM_001365440.1 , XM_017354179.1 | |
Accession Version | NM_001365440.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 681bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-03-21 | |
Organism | Danio rerio(zebrafish) | |
Product | ATPase H+ transporting V1 subunit E1a | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CR376785.10. On Aug 25, 2018 this sequence version replaced XM_017354179.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: BC086733.1, GFIL01044203.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGCGCTCA GCGATGCCGC CGTACAGAAA CAGATCAAAC ACATGATGGC CTTCATTGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001352369.1 |
CDS | 187..867 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001365440.1 |
1 | ATGGCGCTCA GCGATGCCGC CGTACAGAAA CAGATCAAAC ACATGATGGC CTTCATTGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa57889 | |
Clone ID Related Accession (Same CDS sequence) | NM_001365440.1 , XM_017354179.1 | |
Accession Version | XM_017354179.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 681bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | V-type proton ATPase subunit E 1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007136.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGCTCA GCGATGCCGC CGTACAGAAA CAGATCAAAC ACATGATGGC CTTCATTGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017209668.1 |
CDS | 187..867 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017354179.1 |
1 | ATGGCGCTCA GCGATGCCGC CGTACAGAAA CAGATCAAAC ACATGATGGC CTTCATTGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Evolution of complexity in the zebrafish synapse proteome. |
RFX transcription factors are essential for hearing in mice. |
The zebrafish mutants for the V-ATPase subunits d, ac45, E, H and c and their variable pigment dilution phenotype. |
Pigmentation pathway evolution after whole-genome duplication in fish. |