Gene Symbol | xkr5b |
Entrez Gene ID | 100000884 |
Full Name | XK-related protein 5-like |
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
ORF » Species Summary » Danio rerio » xkr5b cDNA ORF clone
Gene Symbol | xkr5b |
Entrez Gene ID | 100000884 |
Full Name | XK-related protein 5-like |
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
mRNA | Protein | Name |
---|---|---|
XM_017351826.1 | XP_017207315.1 | XK-related protein 5 |
XM_017351826.2 | XP_017207315.2 | XK-related protein 5 |
NM_001365886.1 | NP_001352815.1 | XK related 5b |
Bos taurus (cattle) | XKR5 | XP_003587980.1 |
Rattus norvegicus (Norway rat) | Xkr5 | NP_001012228.1 |
LOC716883 | XP_001098341.2 | |
Mus musculus (house mouse) | Xkr5 | NP_001106821.1 |
Danio rerio (zebrafish) | LOC100000884 | XP_001340990.2 |
Danio rerio (zebrafish) | xrg5 | NP_001012260.1 |
Xenopus tropicalis (tropical clawed frog) | xkr5 | NP_001029114.1 |
Homo sapiens (human) | XKR5 | NP_997294.3 |
Pan troglodytes (chimpanzee) | XKR5 | NP_001028207.1 |
Canis lupus familiaris (dog) | XKR5 | XP_540057.3 |
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following xkr5b gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the xkr5b cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ODa55731 | |
Clone ID Related Accession (Same CDS sequence) | XM_017351826.1 | |
Accession Version | XM_017351826.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1371bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-23 | |
Organism | Danio rerio(Zebrafish) | |
Product | XK-related protein 5 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007128.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAGTCCC AGGCTGAGCA GGTTCAGTTT GGTGCAGTAC TGATACAGCA AGCAGATGTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017207315.1 |
CDS | 276..1646 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017351826.1 |
1 | ATGAAGTCCC AGGCTGAGCA GGTTCAGTTT GGTGCAGTAC TGATACAGCA AGCAGATGTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa22702 | |
Clone ID Related Accession (Same CDS sequence) | XM_017351826.2 , NM_001365886.1 | |
Accession Version | NM_001365886.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1659bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-03-21 | |
Organism | Danio rerio(zebrafish) | |
Product | XK related 5b | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CU019637.6 and CR352331.8. On Sep 15, 2018 this sequence version replaced XM_017351826.2. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: GFIL01014710.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476742, SAMEA4476749 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGCAGAATC GAAAGGGAAG TGAAATCACA TGGAGTCACG TATGTCTCTA CTCATTTTCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001352815.1 |
CDS | 107..1765 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001365886.1 |
1 | ATGCAGAATC GAAAGGGAAG TGAAATCACA TGGAGTCACG TATGTCTCTA CTCATTTTCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa22702 | |
Clone ID Related Accession (Same CDS sequence) | XM_017351826.2 , NM_001365886.1 | |
Accession Version | XM_017351826.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1659bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | XK-related protein 5 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007128.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_017351826.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCAGAATC GAAAGGGAAG TGAAATCACA TGGAGTCACG TATGTCTCTA CTCATTTTCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017207315.2 |
CDS | 107..1765 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017351826.2 |
1 | ATGCAGAATC GAAAGGGAAG TGAAATCACA TGGAGTCACG TATGTCTCTA CTCATTTTCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. |