LOC107082930 cDNA ORF clone, Cyprinodon variegatus(sheepshead minnow)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC107082930
Entrez Gene ID	107082930
Full Name	gap junction alpha-3 protein-like
Gene Type	protein-coding
Organism	Cyprinodon variegatus(sheepshead minnow)

mRNA and Protein(s)

mRNA	Protein	Name
XM_015371828.1	XP_015227314.1	gap junction alpha-3 protein-like
XM_015371827.1	XP_015227313.1	gap junction alpha-3 protein-like

Pathways from BioSystems
Gene Ontology

The following LOC107082930 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC107082930 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OCy05156	XM_015371827.1 Latest version!	Cyprinodon variegatus gap junction alpha-3 protein-like (LOC107082930), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$174.30 $249.00
OCy05156	XM_015371828.1 Latest version!	Cyprinodon variegatus gap junction alpha-3 protein-like (LOC107082930), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$174.30 $249.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC107082930 ( XM_015371828.1 ) cDNA ORF clone, Cyprinodon variegatus(sheepshead minnow) -> XP_015227314.1 Cyprinodon variegatus gap junction alpha-3 protein-like (LOC107082930), transcript variant X2, mRNA.

Price & Availability↑

CloneID	OCy05156
Clone ID Related Accession (Same CDS sequence)	XM_015371828.1 , XM_015371827.1
Accession Version	XM_015371828.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 801bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-01-13
Organism	Cyprinodon variegatus(sheepshead minnow)
Product	gap junction alpha-3 protein-like
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_015150518.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Cyprinodon variegatus Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGGAGGAG GAGACTTTGG CAAGTTATCA GACCTGCTGG AGACGGCTCA AAAGCATTCT 
ACCACTGTTG GTAAAGTCTG GCTCACCGTG CTGTTTGTCT TCCGCATCTT TGTCCTGGTA 
ACAGCTGCTA AAGAAGTGTG GGGTGACGAG CAGTCCAATT TCTTATGTGA CACTAACCAA 
CCAGGCTGTC AACTTGTTTG TTACGATAAG ACCTTCCCAA TTTCTCATGT CCGCTTCTGG 
GTGATGCAAA TAATTTTTGT CTCCACACCA ACACTTATCT ACCTGGGGTT GGCTCTCCAC 
AAAAAACGCA TCAATGAGAA GAAAGAAATA AAAAAATCAA ATCAAAGCAT CAATAAGAAA 
AAAAAGAAAA GCAAAAGAGA TCAAGATCAG AGCATCAATG AGAATAATCA AGGAGATAGC 
ACCACAGAAG ATCTAAAGAG TAAAAGTAAA AAAGAAGAAG TACAGGAACT GCCACTGGAA 
GGTGGTGTCC TGAAAGCGTA CGTCTTCAAC ATTATTTTCA AGATTCTGTT TGAAGTGGCC 
TTTCTTGTAG CTCACTACTT CCTGTATGGA TTTGGCTTGG ATCCGATGTA CAGCTGTGAA 
CGCTGGCCCT GCCTCACCAA AGTGCTCTGC TATGTGTCCC GACCCACGGA GAAAACAGTC 
TTCATCATCT TCATGCTTGT TACTGCTCTA GTGTCTCTGC TACTCAACGT AGTGGAGGGG 
TTTCATCTAT TATGCAAGAA AGCAAAGCAG CAAAAGAAGA GCATTCAGGG AAATAGAAAT 
GAGAAGGATG GTGTGGTTTA G

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_015227314.1
CDS	63..863
Translation	MGGGDFGKLSDLLETAQKHSTTVGKVWLTVLFVFRIFVLVTAAKEVWGDEQSNFLCDTNQPGCQLVCYDKTFPISHVRFWVMQIIFVSTPTLIYLGLALHKKRINEKKEIKKSNQSINKKKKKSKRDQDQSINENNQGDSTTEDLKSKSKKEEVQELPLEGGVLKAYVFNIIFKILFEVAFLVAHYFLYGFGLDPMYSCERWPCLTKVLCYVSRPTEKTVFIIFMLVTALVSLLLNVVEGFHLLCKKAKQQKKSIQGNRNEKDGVV

Target ORF information:

RefSeq Version	XM_015371828.1
Organism	Cyprinodon variegatus(sheepshead minnow)
Definition	Cyprinodon variegatus gap junction alpha-3 protein-like (LOC107082930), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_015371828.1

ORF Insert Sequence:

ATGGGAGGAG GAGACTTTGG CAAGTTATCA GACCTGCTGG AGACGGCTCA AAAGCATTCT 
ACCACTGTTG GTAAAGTCTG GCTCACCGTG CTGTTTGTCT TCCGCATCTT TGTCCTGGTA 
ACAGCTGCTA AAGAAGTGTG GGGTGACGAG CAGTCCAATT TCTTATGTGA CACTAACCAA 
CCAGGCTGTC AACTTGTTTG TTACGATAAG ACCTTCCCAA TTTCTCATGT CCGCTTCTGG 
GTGATGCAAA TAATTTTTGT CTCCACACCA ACACTTATCT ACCTGGGGTT GGCTCTCCAC 
AAAAAACGCA TCAATGAGAA GAAAGAAATA AAAAAATCAA ATCAAAGCAT CAATAAGAAA 
AAAAAGAAAA GCAAAAGAGA TCAAGATCAG AGCATCAATG AGAATAATCA AGGAGATAGC 
ACCACAGAAG ATCTAAAGAG TAAAAGTAAA AAAGAAGAAG TACAGGAACT GCCACTGGAA 
GGTGGTGTCC TGAAAGCGTA CGTCTTCAAC ATTATTTTCA AGATTCTGTT TGAAGTGGCC 
TTTCTTGTAG CTCACTACTT CCTGTATGGA TTTGGCTTGG ATCCGATGTA CAGCTGTGAA 
CGCTGGCCCT GCCTCACCAA AGTGCTCTGC TATGTGTCCC GACCCACGGA GAAAACAGTC 
TTCATCATCT TCATGCTTGT TACTGCTCTA GTGTCTCTGC TACTCAACGT AGTGGAGGGG 
TTTCATCTAT TATGCAAGAA AGCAAAGCAG CAAAAGAAGA GCATTCAGGG AAATAGAAAT 
GAGAAGGATG GTGTGGTTTA G

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

LOC107082930 ( XM_015371827.1 ) cDNA ORF clone, Cyprinodon variegatus(sheepshead minnow) -> XP_015227313.1 Cyprinodon variegatus gap junction alpha-3 protein-like (LOC107082930), transcript variant X1, mRNA.

Price & Availability↑

CloneID	OCy05156
Clone ID Related Accession (Same CDS sequence)	XM_015371828.1 , XM_015371827.1
Accession Version	XM_015371827.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 801bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-01-13
Organism	Cyprinodon variegatus(sheepshead minnow)
Product	gap junction alpha-3 protein-like
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_015150518.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Cyprinodon variegatus Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGGAGGAG GAGACTTTGG CAAGTTATCA GACCTGCTGG AGACGGCTCA AAAGCATTCT 
ACCACTGTTG GTAAAGTCTG GCTCACCGTG CTGTTTGTCT TCCGCATCTT TGTCCTGGTA 
ACAGCTGCTA AAGAAGTGTG GGGTGACGAG CAGTCCAATT TCTTATGTGA CACTAACCAA 
CCAGGCTGTC AACTTGTTTG TTACGATAAG ACCTTCCCAA TTTCTCATGT CCGCTTCTGG 
GTGATGCAAA TAATTTTTGT CTCCACACCA ACACTTATCT ACCTGGGGTT GGCTCTCCAC 
AAAAAACGCA TCAATGAGAA GAAAGAAATA AAAAAATCAA ATCAAAGCAT CAATAAGAAA 
AAAAAGAAAA GCAAAAGAGA TCAAGATCAG AGCATCAATG AGAATAATCA AGGAGATAGC 
ACCACAGAAG ATCTAAAGAG TAAAAGTAAA AAAGAAGAAG TACAGGAACT GCCACTGGAA 
GGTGGTGTCC TGAAAGCGTA CGTCTTCAAC ATTATTTTCA AGATTCTGTT TGAAGTGGCC 
TTTCTTGTAG CTCACTACTT CCTGTATGGA TTTGGCTTGG ATCCGATGTA CAGCTGTGAA 
CGCTGGCCCT GCCTCACCAA AGTGCTCTGC TATGTGTCCC GACCCACGGA GAAAACAGTC 
TTCATCATCT TCATGCTTGT TACTGCTCTA GTGTCTCTGC TACTCAACGT AGTGGAGGGG 
TTTCATCTAT TATGCAAGAA AGCAAAGCAG CAAAAGAAGA GCATTCAGGG AAATAGAAAT 
GAGAAGGATG GTGTGGTTTA G

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_015227313.1
CDS	129..929
Translation	MGGGDFGKLSDLLETAQKHSTTVGKVWLTVLFVFRIFVLVTAAKEVWGDEQSNFLCDTNQPGCQLVCYDKTFPISHVRFWVMQIIFVSTPTLIYLGLALHKKRINEKKEIKKSNQSINKKKKKSKRDQDQSINENNQGDSTTEDLKSKSKKEEVQELPLEGGVLKAYVFNIIFKILFEVAFLVAHYFLYGFGLDPMYSCERWPCLTKVLCYVSRPTEKTVFIIFMLVTALVSLLLNVVEGFHLLCKKAKQQKKSIQGNRNEKDGVV

Target ORF information:

RefSeq Version	XM_015371827.1
Organism	Cyprinodon variegatus(sheepshead minnow)
Definition	Cyprinodon variegatus gap junction alpha-3 protein-like (LOC107082930), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_015371827.1

ORF Insert Sequence:

ATGGGAGGAG GAGACTTTGG CAAGTTATCA GACCTGCTGG AGACGGCTCA AAAGCATTCT 
ACCACTGTTG GTAAAGTCTG GCTCACCGTG CTGTTTGTCT TCCGCATCTT TGTCCTGGTA 
ACAGCTGCTA AAGAAGTGTG GGGTGACGAG CAGTCCAATT TCTTATGTGA CACTAACCAA 
CCAGGCTGTC AACTTGTTTG TTACGATAAG ACCTTCCCAA TTTCTCATGT CCGCTTCTGG 
GTGATGCAAA TAATTTTTGT CTCCACACCA ACACTTATCT ACCTGGGGTT GGCTCTCCAC 
AAAAAACGCA TCAATGAGAA GAAAGAAATA AAAAAATCAA ATCAAAGCAT CAATAAGAAA 
AAAAAGAAAA GCAAAAGAGA TCAAGATCAG AGCATCAATG AGAATAATCA AGGAGATAGC 
ACCACAGAAG ATCTAAAGAG TAAAAGTAAA AAAGAAGAAG TACAGGAACT GCCACTGGAA 
GGTGGTGTCC TGAAAGCGTA CGTCTTCAAC ATTATTTTCA AGATTCTGTT TGAAGTGGCC 
TTTCTTGTAG CTCACTACTT CCTGTATGGA TTTGGCTTGG ATCCGATGTA CAGCTGTGAA 
CGCTGGCCCT GCCTCACCAA AGTGCTCTGC TATGTGTCCC GACCCACGGA GAAAACAGTC 
TTCATCATCT TCATGCTTGT TACTGCTCTA GTGTCTCTGC TACTCAACGT AGTGGAGGGG 
TTTCATCTAT TATGCAAGAA AGCAAAGCAG CAAAAGAAGA GCATTCAGGG AAATAGAAAT 
GAGAAGGATG GTGTGGTTTA G

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.