LOC100175951 cDNA ORF clone, Ciona intestinalis(vase tunicate)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC100175951
Entrez Gene ID	100175951
Full Name	ubiquitin carboxyl-terminal hydrolase 46-like
Gene Type	protein-coding
Organism	Ciona intestinalis(vase tunicate)

mRNA and Protein(s)

mRNA	Protein	Name
XM_002120580.4	XP_002120616.1	ubiquitin carboxyl-terminal hydrolase 46-like
XM_002120580.5	XP_002120616.1	ubiquitin carboxyl-terminal hydrolase 46-like

Pathways from BioSystems
Gene Ontology

The following LOC100175951 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC100175951 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
OCi12282	XM_002120580.5 Latest version!	Ciona intestinalis ubiquitin carboxyl-terminal hydrolase 46-like (LOC100175951), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00
View Old Accession Versions >>
OCi12282	XM_002120580.4	Ciona intestinalis ubiquitin carboxyl-terminal hydrolase 46-like (LOC100175951), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00
Hide Old Accession Versions >>

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC100175951 ( XM_002120580.4 ) cDNA ORF clone, Ciona intestinalis(vase tunicate) -> XP_002120616.1 Ciona intestinalis ubiquitin carboxyl-terminal hydrolase 46-like (LOC100175951), transcript variant X1, mRNA.

Price & Availability↑

CloneID	OCi12282
Clone ID Related Accession (Same CDS sequence)	XM_002120580.4 , XM_002120580.5
Accession Version	XM_002120580.4	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1467bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-10-20
Organism	Ciona intestinalis(vase tunicate)
Product	ubiquitin carboxyl-terminal hydrolase 46-like
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_004191413.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Oct 21, 2016 this sequence version replaced XM_002120580.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Ciona intestinalis Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGAAGGGGT GTTTGCCTAA TATCATGGGA GCCAACGCTT CAGCTGCACT AATGAAGGAA 
ATAGGAATAG ATCAACTGCC TGCTAATGAG AGATATTTTG GTTTGCATAA CTTTGGGAAC 
ACATGTTATT GTAACTCAGT CCTTCAAGCT TTGTTCTTCT GCCCACCATT CCGCGAGAAG 
GTTCTACAAT ACAGATCCCA ACAGAACGGT AAACATGGTT GGAATGGGAA GAAGGATAGC 
TTACTTGCTT GTTTGTGCGA TCTCTTCTAC AATATATCGA GCCAGAAGAA GAAATGTGGG 
GTTTTGCATC CGAAGAAGTT TATTGCTCGC TTGAGGAAAG AATATGAATC GTTTGACAAT 
TACGCCCAAC ACGACGCCCA TGAATTGTTC AACCACCTCA TTAACTCTAT ACATATTGTT 
CTGCTGGAAG AGAAAACTGC AGAGAGGGAA AGAAGGAGGT TGTTGGATCA ACAAATATCA 
TCGGGGGTTT CAATTAAGAA GGAAAGACAT AGTTTCTTCT CAAGAATGAA GAAGGAAAAC 
AGATCTTCCA AGAGCGTATC AGGTACTCCG GAAACTGCTG GATCAACATC CGGGAGTTTG 
GAAGCTCAGA ATGAAGATTC CTCTTCGTCA GCTGCCATGT CGGAGTCCCC ACTTCCAACC 
GATACAGAAT CATCCACCCA TGACCATGAG AAAGTGAGAG AGGAGCAAGA GCAGGAGGAG 
GAGGAGGAGA AACCTTCCAA GCTTGGGTAT TTTGCCAGAA AGAGGAAAAA TGCGAAAAAA 
TCCACGGACT CGAAACCTCC GGAAAACGGT GACTTACCGA GGACACCTAC TGGTCAAAGT 
GAGGATGGAT TAGATGACAT GACGACGTGG ATTCATGAAA TATTTCAAGG AACTTACACA 
ACTATCACCA GATGTTTGAC GTGTGAAACT GTAAAGAACA AAGATGAAGA TTTCCTCGAT 
CTTTCCGTTG ACATCGAACA AAATACTTCA ATTTCAAACT GTTTAAGAGT ATTCAGCAAC 
CAACAAACAT TATCGGGCGA ACATAAATAT TCATGTGAAG TTTGTAGAAG CAAACAAGAA 
GCACAGATTG AAATGAGGAT CAAGAAACTC CCCACCATCC TTGCTCTGCA TTTGAAGAGG 
TTTAAATATT GTGAGACATT GAACAAATAC ACAAAACTCA CATACAGGGT TGTTTTCCCT 
TTCGAGTTAC GTTTGTTAAA CACGACAGAG GACGCCGATA ATCCTGAGCG ACTTTATGAC 
TTGATGGCTG TTGTTGTTCA TTGTGGATCA GGTCCTTATC GAGGTCACTA TGTGTCGATT 
GTGAAGAGTC ATGACATGTG GTTATTGTTT GATGACGATA ATGTAGAGAA ACTTGAACCA 
AGTGGAATGG AGGATTTCTA TGGAGTAACT GCTGACAAGA ACTCTGAATC GGGATATATT 
CTATTCTATC AAAGCAAGGA ACAGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_002120616.1
CDS	208..1674
Translation	MKGCLPNIMGANASAALMKEIGIDQLPANERYFGLHNFGNTCYCNSVLQALFFCPPFREKVLQYRSQQNGKHGWNGKKDSLLACLCDLFYNISSQKKKCGVLHPKKFIARLRKEYESFDNYAQHDAHELFNHLINSIHIVLLEEKTAERERRRLLDQQISSGVSIKKERHSFFSRMKKENRSSKSVSGTPETAGSTSGSLEAQNEDSSSSAAMSESPLPTDTESSTHDHEKVREEQEQEEEEEKPSKLGYFARKRKNAKKSTDSKPPENGDLPRTPTGQSEDGLDDMTTWIHEIFQGTYTTITRCLTCETVKNKDEDFLDLSVDIEQNTSISNCLRVFSNQQTLSGEHKYSCEVCRSKQEAQIEMRIKKLPTILALHLKRFKYCETLNKYTKLTYRVVFPFELRLLNTTEDADNPERLYDLMAVVVHCGSGPYRGHYVSIVKSHDMWLLFDDDNVEKLEPSGMEDFYGVTADKNSESGYILFYQSKEQ

Target ORF information:

RefSeq Version	XM_002120580.4
Organism	Ciona intestinalis(vase tunicate)
Definition	Ciona intestinalis ubiquitin carboxyl-terminal hydrolase 46-like (LOC100175951), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_002120580.4

ORF Insert Sequence:

ATGAAGGGGT GTTTGCCTAA TATCATGGGA GCCAACGCTT CAGCTGCACT AATGAAGGAA 
ATAGGAATAG ATCAACTGCC TGCTAATGAG AGATATTTTG GTTTGCATAA CTTTGGGAAC 
ACATGTTATT GTAACTCAGT CCTTCAAGCT TTGTTCTTCT GCCCACCATT CCGCGAGAAG 
GTTCTACAAT ACAGATCCCA ACAGAACGGT AAACATGGTT GGAATGGGAA GAAGGATAGC 
TTACTTGCTT GTTTGTGCGA TCTCTTCTAC AATATATCGA GCCAGAAGAA GAAATGTGGG 
GTTTTGCATC CGAAGAAGTT TATTGCTCGC TTGAGGAAAG AATATGAATC GTTTGACAAT 
TACGCCCAAC ACGACGCCCA TGAATTGTTC AACCACCTCA TTAACTCTAT ACATATTGTT 
CTGCTGGAAG AGAAAACTGC AGAGAGGGAA AGAAGGAGGT TGTTGGATCA ACAAATATCA 
TCGGGGGTTT CAATTAAGAA GGAAAGACAT AGTTTCTTCT CAAGAATGAA GAAGGAAAAC 
AGATCTTCCA AGAGCGTATC AGGTACTCCG GAAACTGCTG GATCAACATC CGGGAGTTTG 
GAAGCTCAGA ATGAAGATTC CTCTTCGTCA GCTGCCATGT CGGAGTCCCC ACTTCCAACC 
GATACAGAAT CATCCACCCA TGACCATGAG AAAGTGAGAG AGGAGCAAGA GCAGGAGGAG 
GAGGAGGAGA AACCTTCCAA GCTTGGGTAT TTTGCCAGAA AGAGGAAAAA TGCGAAAAAA 
TCCACGGACT CGAAACCTCC GGAAAACGGT GACTTACCGA GGACACCTAC TGGTCAAAGT 
GAGGATGGAT TAGATGACAT GACGACGTGG ATTCATGAAA TATTTCAAGG AACTTACACA 
ACTATCACCA GATGTTTGAC GTGTGAAACT GTAAAGAACA AAGATGAAGA TTTCCTCGAT 
CTTTCCGTTG ACATCGAACA AAATACTTCA ATTTCAAACT GTTTAAGAGT ATTCAGCAAC 
CAACAAACAT TATCGGGCGA ACATAAATAT TCATGTGAAG TTTGTAGAAG CAAACAAGAA 
GCACAGATTG AAATGAGGAT CAAGAAACTC CCCACCATCC TTGCTCTGCA TTTGAAGAGG 
TTTAAATATT GTGAGACATT GAACAAATAC ACAAAACTCA CATACAGGGT TGTTTTCCCT 
TTCGAGTTAC GTTTGTTAAA CACGACAGAG GACGCCGATA ATCCTGAGCG ACTTTATGAC 
TTGATGGCTG TTGTTGTTCA TTGTGGATCA GGTCCTTATC GAGGTCACTA TGTGTCGATT 
GTGAAGAGTC ATGACATGTG GTTATTGTTT GATGACGATA ATGTAGAGAA ACTTGAACCA 
AGTGGAATGG AGGATTTCTA TGGAGTAACT GCTGACAAGA ACTCTGAATC GGGATATATT 
CTATTCTATC AAAGCAAGGA ACAGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

LOC100175951 ( XM_002120580.5 ) cDNA ORF clone, Ciona intestinalis(vase tunicate) -> XP_002120616.1 Ciona intestinalis ubiquitin carboxyl-terminal hydrolase 46-like (LOC100175951), mRNA.

Price & Availability↑

CloneID	OCi12282
Clone ID Related Accession (Same CDS sequence)	XM_002120580.4 , XM_002120580.5
Accession Version	XM_002120580.5 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1467bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-10-21
Organism	Ciona intestinalis(vase tunicate)
Product	ubiquitin carboxyl-terminal hydrolase 46-like
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_004191413.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Oct 22, 2018 this sequence version replaced XM_002120580.4. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Ciona intestinalis Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGAAGGGGT GTTTGCCTAA TATCATGGGA GCCAACGCTT CAGCTGCACT AATGAAGGAA 
ATAGGAATAG ATCAACTGCC TGCTAATGAG AGATATTTTG GTTTGCATAA CTTTGGGAAC 
ACATGTTATT GTAACTCAGT CCTTCAAGCT TTGTTCTTCT GCCCACCATT CCGCGAGAAG 
GTTCTACAAT ACAGATCCCA ACAGAACGGT AAACATGGTT GGAATGGGAA GAAGGATAGC 
TTACTTGCTT GTTTGTGCGA TCTCTTCTAC AATATATCGA GCCAGAAGAA GAAATGTGGG 
GTTTTGCATC CGAAGAAGTT TATTGCTCGC TTGAGGAAAG AATATGAATC GTTTGACAAT 
TACGCCCAAC ACGACGCCCA TGAATTGTTC AACCACCTCA TTAACTCTAT ACATATTGTT 
CTGCTGGAAG AGAAAACTGC AGAGAGGGAA AGAAGGAGGT TGTTGGATCA ACAAATATCA 
TCGGGGGTTT CAATTAAGAA GGAAAGACAT AGTTTCTTCT CAAGAATGAA GAAGGAAAAC 
AGATCTTCCA AGAGCGTATC AGGTACTCCG GAAACTGCTG GATCAACATC CGGGAGTTTG 
GAAGCTCAGA ATGAAGATTC CTCTTCGTCA GCTGCCATGT CGGAGTCCCC ACTTCCAACC 
GATACAGAAT CATCCACCCA TGACCATGAG AAAGTGAGAG AGGAGCAAGA GCAGGAGGAG 
GAGGAGGAGA AACCTTCCAA GCTTGGGTAT TTTGCCAGAA AGAGGAAAAA TGCGAAAAAA 
TCCACGGACT CGAAACCTCC GGAAAACGGT GACTTACCGA GGACACCTAC TGGTCAAAGT 
GAGGATGGAT TAGATGACAT GACGACGTGG ATTCATGAAA TATTTCAAGG AACTTACACA 
ACTATCACCA GATGTTTGAC GTGTGAAACT GTAAAGAACA AAGATGAAGA TTTCCTCGAT 
CTTTCCGTTG ACATCGAACA AAATACTTCA ATTTCAAACT GTTTAAGAGT ATTCAGCAAC 
CAACAAACAT TATCGGGCGA ACATAAATAT TCATGTGAAG TTTGTAGAAG CAAACAAGAA 
GCACAGATTG AAATGAGGAT CAAGAAACTC CCCACCATCC TTGCTCTGCA TTTGAAGAGG 
TTTAAATATT GTGAGACATT GAACAAATAC ACAAAACTCA CATACAGGGT TGTTTTCCCT 
TTCGAGTTAC GTTTGTTAAA CACGACAGAG GACGCCGATA ATCCTGAGCG ACTTTATGAC 
TTGATGGCTG TTGTTGTTCA TTGTGGATCA GGTCCTTATC GAGGTCACTA TGTGTCGATT 
GTGAAGAGTC ATGACATGTG GTTATTGTTT GATGACGATA ATGTAGAGAA ACTTGAACCA 
AGTGGAATGG AGGATTTCTA TGGAGTAACT GCTGACAAGA ACTCTGAATC GGGATATATT 
CTATTCTATC AAAGCAAGGA ACAGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_002120616.1
CDS	96..1562
Translation	MKGCLPNIMGANASAALMKEIGIDQLPANERYFGLHNFGNTCYCNSVLQALFFCPPFREKVLQYRSQQNGKHGWNGKKDSLLACLCDLFYNISSQKKKCGVLHPKKFIARLRKEYESFDNYAQHDAHELFNHLINSIHIVLLEEKTAERERRRLLDQQISSGVSIKKERHSFFSRMKKENRSSKSVSGTPETAGSTSGSLEAQNEDSSSSAAMSESPLPTDTESSTHDHEKVREEQEQEEEEEKPSKLGYFARKRKNAKKSTDSKPPENGDLPRTPTGQSEDGLDDMTTWIHEIFQGTYTTITRCLTCETVKNKDEDFLDLSVDIEQNTSISNCLRVFSNQQTLSGEHKYSCEVCRSKQEAQIEMRIKKLPTILALHLKRFKYCETLNKYTKLTYRVVFPFELRLLNTTEDADNPERLYDLMAVVVHCGSGPYRGHYVSIVKSHDMWLLFDDDNVEKLEPSGMEDFYGVTADKNSESGYILFYQSKEQ

Target ORF information:

RefSeq Version	XM_002120580.5
Organism	Ciona intestinalis(vase tunicate)
Definition	Ciona intestinalis ubiquitin carboxyl-terminal hydrolase 46-like (LOC100175951), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_002120580.5

ORF Insert Sequence:

ATGAAGGGGT GTTTGCCTAA TATCATGGGA GCCAACGCTT CAGCTGCACT AATGAAGGAA 
ATAGGAATAG ATCAACTGCC TGCTAATGAG AGATATTTTG GTTTGCATAA CTTTGGGAAC 
ACATGTTATT GTAACTCAGT CCTTCAAGCT TTGTTCTTCT GCCCACCATT CCGCGAGAAG 
GTTCTACAAT ACAGATCCCA ACAGAACGGT AAACATGGTT GGAATGGGAA GAAGGATAGC 
TTACTTGCTT GTTTGTGCGA TCTCTTCTAC AATATATCGA GCCAGAAGAA GAAATGTGGG 
GTTTTGCATC CGAAGAAGTT TATTGCTCGC TTGAGGAAAG AATATGAATC GTTTGACAAT 
TACGCCCAAC ACGACGCCCA TGAATTGTTC AACCACCTCA TTAACTCTAT ACATATTGTT 
CTGCTGGAAG AGAAAACTGC AGAGAGGGAA AGAAGGAGGT TGTTGGATCA ACAAATATCA 
TCGGGGGTTT CAATTAAGAA GGAAAGACAT AGTTTCTTCT CAAGAATGAA GAAGGAAAAC 
AGATCTTCCA AGAGCGTATC AGGTACTCCG GAAACTGCTG GATCAACATC CGGGAGTTTG 
GAAGCTCAGA ATGAAGATTC CTCTTCGTCA GCTGCCATGT CGGAGTCCCC ACTTCCAACC 
GATACAGAAT CATCCACCCA TGACCATGAG AAAGTGAGAG AGGAGCAAGA GCAGGAGGAG 
GAGGAGGAGA AACCTTCCAA GCTTGGGTAT TTTGCCAGAA AGAGGAAAAA TGCGAAAAAA 
TCCACGGACT CGAAACCTCC GGAAAACGGT GACTTACCGA GGACACCTAC TGGTCAAAGT 
GAGGATGGAT TAGATGACAT GACGACGTGG ATTCATGAAA TATTTCAAGG AACTTACACA 
ACTATCACCA GATGTTTGAC GTGTGAAACT GTAAAGAACA AAGATGAAGA TTTCCTCGAT 
CTTTCCGTTG ACATCGAACA AAATACTTCA ATTTCAAACT GTTTAAGAGT ATTCAGCAAC 
CAACAAACAT TATCGGGCGA ACATAAATAT TCATGTGAAG TTTGTAGAAG CAAACAAGAA 
GCACAGATTG AAATGAGGAT CAAGAAACTC CCCACCATCC TTGCTCTGCA TTTGAAGAGG 
TTTAAATATT GTGAGACATT GAACAAATAC ACAAAACTCA CATACAGGGT TGTTTTCCCT 
TTCGAGTTAC GTTTGTTAAA CACGACAGAG GACGCCGATA ATCCTGAGCG ACTTTATGAC 
TTGATGGCTG TTGTTGTTCA TTGTGGATCA GGTCCTTATC GAGGTCACTA TGTGTCGATT 
GTGAAGAGTC ATGACATGTG GTTATTGTTT GATGACGATA ATGTAGAGAA ACTTGAACCA 
AGTGGAATGG AGGATTTCTA TGGAGTAACT GCTGACAAGA ACTCTGAATC GGGATATATT 
CTATTCTATC AAAGCAAGGA ACAGTAG