LOC103533559 cDNA ORF clone, Calypte anna(Anna's hummingbird)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC103533559
Entrez Gene ID	103533559
Full Name	green-sensitive opsin
Gene Type	protein-coding
Organism	Calypte anna(Anna's hummingbird)

mRNA and Protein(s)

mRNA	Protein	Name
XM_030465392.1	XP_030321252.1	green-sensitive opsin
XM_008499430.1	XP_008497652.1	green-sensitive opsin

Pathways from BioSystems
Gene Ontology

The following LOC103533559 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC103533559 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OCa425290	XM_008499430.1 Latest version!	Calypte anna green-sensitive opsin (LOC103533559), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00
OCa816866	XM_030465392.1 Latest version!	Calypte anna green-sensitive opsin (LOC103533559), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$223.30 $319.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC103533559 ( XM_008499430.1 ) cDNA ORF clone, Calypte anna(Anna's hummingbird) -> XP_008497652.1 Calypte anna green-sensitive opsin (LOC103533559), mRNA.

Price & Availability↑

CloneID	OCa425290
Clone ID Related Accession (Same CDS sequence)	XM_008499430.1
Accession Version	XM_008499430.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1098bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2014-07-09
Organism	Calypte anna(Anna's hummingbird)
Product	green-sensitive opsin
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_007621336.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Calypte anna Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGAACGGGA CAGAAGGTAT CAATTTTTAT GTGCCTATGT CCAACAAAAC AGGGGTGGTG 
AGGAGCCCCT TTGAGTACCC CCAGTACTAC CTGGCCGAGC CCTGGAAATA CCGCCTGGTG 
TGCTGCTACA TCTTCTTCCT CATCTCCACG GGTTTGCCCA TCAACCTCCT CACCCTCCTG 
GTCACCTTCA AACACAAGAA GCTCCGACAA CCACTCAACT ACATCTTGGT CAACTTGGCA 
GTGGCCGATC TCTTCATGGC TTGTTTTGGC TTCACCGTCA CCTTCTACAC AGCCTGGAAC 
GGGTACTTCG TCTTTGGCCC CATCGGTTGT GCCGTGGAAG GCTTCTTTGC CACCCTGGGA 
GGCCAGGTTG CCCTCTGGTC CCTGGTTGTC CTGGCCATCG AGCGTTACAT CGTGGTCTGC 
AAGCCCATGG GCAACTTCCG CTTCTCCGCC AGCCACGCCA TGATGGGCAT CGCCTTCACC 
TGGGTCATGG CCTTCTCCTG TGCTGCTCCC CCCCTCTTTG GCTGGTCCAG ATACATGCCA 
GAGGGGATGC AGTGTTCCTG TGGCCCCGAC TACTACACCC ACAACCCTGA CTACCACAAC 
GAGTCCTACG TCCTCTACAT GTTTGTCATC CACTTCATCA TCCCAGTGGT GGTCATCTTC 
TTCTCCTATG GGCGCCTCAT TTGCAAAGTC CGAGAGGATG CCCCTCACCA TCACCACCAC 
CTCCCCCATG CCCTCAGTTT TTTGGAATCA GCCACCACCC AGAAGGCTGA GAAGGAGGTG 
ACACGAATGG TGATCCTCAT GGTGTTGGGG TTCATGCTGG CCTGGACACC CTATGCTGTG 
GTGGCATTTT GGATCTTCAC CAACAAGGGA GCAGACTTCA CTGCCACGCT CATGTCAGTG 
CCTGCCTTCT TCTCCAAGAG TTCCTCCCTC TACAACCCCA TCATCTACGT CCTCATGAAC 
AAACAGTTCC GTAACTGCAT GATCACCACA ATCTGCTGTG GCAAGAACCC CTTTGGGGAT 
GAAGATGTCT CCTCCACCGT ATCCCAGAGC AAGACTGAGG TCTCCTCTGT CTCCTCCAGC 
CAAGTATCAC CTGCATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_008497652.1
CDS	1..1098
Translation	MNGTEGINFYVPMSNKTGVVRSPFEYPQYYLAEPWKYRLVCCYIFFLISTGLPINLLTLLVTFKHKKLRQPLNYILVNLAVADLFMACFGFTVTFYTAWNGYFVFGPIGCAVEGFFATLGGQVALWSLVVLAIERYIVVCKPMGNFRFSASHAMMGIAFTWVMAFSCAAPPLFGWSRYMPEGMQCSCGPDYYTHNPDYHNESYVLYMFVIHFIIPVVVIFFSYGRLICKVREDAPHHHHHLPHALSFLESATTQKAEKEVTRMVILMVLGFMLAWTPYAVVAFWIFTNKGADFTATLMSVPAFFSKSSSLYNPIIYVLMNKQFRNCMITTICCGKNPFGDEDVSSTVSQSKTEVSSVSSSQVSPA

Target ORF information:

RefSeq Version	XM_008499430.1
Organism	Calypte anna(Anna's hummingbird)
Definition	Calypte anna green-sensitive opsin (LOC103533559), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_008499430.1

ORF Insert Sequence:

ATGAACGGGA CAGAAGGTAT CAATTTTTAT GTGCCTATGT CCAACAAAAC AGGGGTGGTG 
AGGAGCCCCT TTGAGTACCC CCAGTACTAC CTGGCCGAGC CCTGGAAATA CCGCCTGGTG 
TGCTGCTACA TCTTCTTCCT CATCTCCACG GGTTTGCCCA TCAACCTCCT CACCCTCCTG 
GTCACCTTCA AACACAAGAA GCTCCGACAA CCACTCAACT ACATCTTGGT CAACTTGGCA 
GTGGCCGATC TCTTCATGGC TTGTTTTGGC TTCACCGTCA CCTTCTACAC AGCCTGGAAC 
GGGTACTTCG TCTTTGGCCC CATCGGTTGT GCCGTGGAAG GCTTCTTTGC CACCCTGGGA 
GGCCAGGTTG CCCTCTGGTC CCTGGTTGTC CTGGCCATCG AGCGTTACAT CGTGGTCTGC 
AAGCCCATGG GCAACTTCCG CTTCTCCGCC AGCCACGCCA TGATGGGCAT CGCCTTCACC 
TGGGTCATGG CCTTCTCCTG TGCTGCTCCC CCCCTCTTTG GCTGGTCCAG ATACATGCCA 
GAGGGGATGC AGTGTTCCTG TGGCCCCGAC TACTACACCC ACAACCCTGA CTACCACAAC 
GAGTCCTACG TCCTCTACAT GTTTGTCATC CACTTCATCA TCCCAGTGGT GGTCATCTTC 
TTCTCCTATG GGCGCCTCAT TTGCAAAGTC CGAGAGGATG CCCCTCACCA TCACCACCAC 
CTCCCCCATG CCCTCAGTTT TTTGGAATCA GCCACCACCC AGAAGGCTGA GAAGGAGGTG 
ACACGAATGG TGATCCTCAT GGTGTTGGGG TTCATGCTGG CCTGGACACC CTATGCTGTG 
GTGGCATTTT GGATCTTCAC CAACAAGGGA GCAGACTTCA CTGCCACGCT CATGTCAGTG 
CCTGCCTTCT TCTCCAAGAG TTCCTCCCTC TACAACCCCA TCATCTACGT CCTCATGAAC 
AAACAGTTCC GTAACTGCAT GATCACCACA ATCTGCTGTG GCAAGAACCC CTTTGGGGAT 
GAAGATGTCT CCTCCACCGT ATCCCAGAGC AAGACTGAGG TCTCCTCTGT CTCCTCCAGC 
CAAGTATCAC CTGCATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

LOC103533559 ( XM_030465392.1 ) cDNA ORF clone, Calypte anna(Anna's hummingbird) -> XP_030321252.1 Calypte anna green-sensitive opsin (LOC103533559), mRNA.

Price & Availability↑

CloneID	OCa816866
Clone ID Related Accession (Same CDS sequence)	XM_030465392.1
Accession Version	XM_030465392.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1068bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-08-19
Organism	Calypte anna(Anna's hummingbird)
Product	green-sensitive opsin
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_044271.1) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Calypte anna Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGAACGGGA CAGAAGGTAT CAACTTTTAT GTGCCTATGT CCAACAAAAC AGGGGTGGTG 
AGGAGCCCCT TTGAGTACCC CCAGTACTAC CTGGCCGAGC CCTGGAAATA CCGCCTGGTG 
TGCTGCTACA TCTTCTTCCT CATCTCCACG GGTTTGCCCA TCAACCTCCT CACCCTCCTG 
GTCACCTTCA AACACAAGAA GCTCCGACAA CCACTCAACT ACATCTTGGT CAACTTGGCA 
GTGGCCGATC TCTTCATGGC TTGTTTTGGC TTCACCGTCA CCTTCTACAC AGCCTGGAAC 
GGGTACTTCG TCTTTGGCCC CATCGGTTGT GCCGTGGAAG GCTTCTTTGC CACCCTGGGA 
GGCCAGGTTG CCCTCTGGTC CCTGGTTGTC CTGGCCATCG AGCGTTACAT CGTGGTCTGC 
AAGCCCATGG GCAACTTCCG CTTCTCCGCC AGCCACGCCA TGATGGGCAT CGCCTTCACC 
TGGGTCATGG CCTTCTCCTG TGCTGCTCCC CCCCTCTTTG GCTGGTCCAG ATACATGCCA 
GAGGGGATGC AGTGTTCCTG TGGCCCCGAC TACTACACCC ACAACCCTGA CTACCACAAC 
GAGTCCTACG TCCTCTACAT GTTTGTCATC CACTTCATCA TCCCAGTGGT GGTCATCTTC 
TTCTCCTATG GGCGCCTCAT TTGCAAAGTC CGAGAGGCAG CTGCCCAGCA GCAGGAATCA 
GCCACCACCC AGAAGGCTGA GAAGGAGGTG ACACGAATGG TGATCCTCAT GGTGTTGGGG 
TTCATGCTGG CCTGGACACC CTATGCTGTG GTGGCATTTT GGATCTTCAC CAACAAGGGA 
GCAGACTTCA CTGCCACGCT CATGTCAGTG CCTGCCTTCT TCTCCAAGAG TTCCTCCCTC 
TACAACCCCA TCATCTACGT CCTCATGAAC AAACAGTTCC GTAACTGCAT GATCACCACA 
ATCTGCTGTG GCAAGAACCC CTTTGGGGAT GAAGATGTCT CCTCCACCGT ATCCCAGAGC 
AAGACTGAGG TCTCCTCTGT CTCCTCCAGC CAAGTATCAC CTGCATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_030321252.1
CDS	122..1189
Translation	MNGTEGINFYVPMSNKTGVVRSPFEYPQYYLAEPWKYRLVCCYIFFLISTGLPINLLTLLVTFKHKKLRQPLNYILVNLAVADLFMACFGFTVTFYTAWNGYFVFGPIGCAVEGFFATLGGQVALWSLVVLAIERYIVVCKPMGNFRFSASHAMMGIAFTWVMAFSCAAPPLFGWSRYMPEGMQCSCGPDYYTHNPDYHNESYVLYMFVIHFIIPVVVIFFSYGRLICKVREAAAQQQESATTQKAEKEVTRMVILMVLGFMLAWTPYAVVAFWIFTNKGADFTATLMSVPAFFSKSSSLYNPIIYVLMNKQFRNCMITTICCGKNPFGDEDVSSTVSQSKTEVSSVSSSQVSPA

Target ORF information:

RefSeq Version	XM_030465392.1
Organism	Calypte anna(Anna's hummingbird)
Definition	Calypte anna green-sensitive opsin (LOC103533559), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_030465392.1

ORF Insert Sequence:

ATGAACGGGA CAGAAGGTAT CAACTTTTAT GTGCCTATGT CCAACAAAAC AGGGGTGGTG 
AGGAGCCCCT TTGAGTACCC CCAGTACTAC CTGGCCGAGC CCTGGAAATA CCGCCTGGTG 
TGCTGCTACA TCTTCTTCCT CATCTCCACG GGTTTGCCCA TCAACCTCCT CACCCTCCTG 
GTCACCTTCA AACACAAGAA GCTCCGACAA CCACTCAACT ACATCTTGGT CAACTTGGCA 
GTGGCCGATC TCTTCATGGC TTGTTTTGGC TTCACCGTCA CCTTCTACAC AGCCTGGAAC 
GGGTACTTCG TCTTTGGCCC CATCGGTTGT GCCGTGGAAG GCTTCTTTGC CACCCTGGGA 
GGCCAGGTTG CCCTCTGGTC CCTGGTTGTC CTGGCCATCG AGCGTTACAT CGTGGTCTGC 
AAGCCCATGG GCAACTTCCG CTTCTCCGCC AGCCACGCCA TGATGGGCAT CGCCTTCACC 
TGGGTCATGG CCTTCTCCTG TGCTGCTCCC CCCCTCTTTG GCTGGTCCAG ATACATGCCA 
GAGGGGATGC AGTGTTCCTG TGGCCCCGAC TACTACACCC ACAACCCTGA CTACCACAAC 
GAGTCCTACG TCCTCTACAT GTTTGTCATC CACTTCATCA TCCCAGTGGT GGTCATCTTC 
TTCTCCTATG GGCGCCTCAT TTGCAAAGTC CGAGAGGCAG CTGCCCAGCA GCAGGAATCA 
GCCACCACCC AGAAGGCTGA GAAGGAGGTG ACACGAATGG TGATCCTCAT GGTGTTGGGG 
TTCATGCTGG CCTGGACACC CTATGCTGTG GTGGCATTTT GGATCTTCAC CAACAAGGGA 
GCAGACTTCA CTGCCACGCT CATGTCAGTG CCTGCCTTCT TCTCCAAGAG TTCCTCCCTC 
TACAACCCCA TCATCTACGT CCTCATGAAC AAACAGTTCC GTAACTGCAT GATCACCACA 
ATCTGCTGTG GCAAGAACCC CTTTGGGGAT GAAGATGTCT CCTCCACCGT ATCCCAGAGC 
AAGACTGAGG TCTCCTCTGT CTCCTCCAGC CAAGTATCAC CTGCATAG