| Gene Symbol | TNFSF13 |
| Entrez Gene ID | 100551510 |
| Full Name | TNF superfamily member 13 |
| Synonyms | TNLG7B |
| Gene Type | protein-coding |
| Organism | Callithrix jacchus(white-tufted-ear marmoset) |
ORF » Species Summary » Callithrix jacchus » TNFSF13 cDNA ORF clone
| Gene Symbol | TNFSF13 |
| Entrez Gene ID | 100551510 |
| Full Name | TNF superfamily member 13 |
| Synonyms | TNLG7B |
| Gene Type | protein-coding |
| Organism | Callithrix jacchus(white-tufted-ear marmoset) |
| mRNA | Protein | Name |
|---|---|---|
| XM_008996551.2 | XP_008994799.1 | tumor necrosis factor ligand superfamily member 13 isoform X1 |
| XM_008996552.2 | XP_008994800.1 | tumor necrosis factor ligand superfamily member 13 isoform X2 |
| XM_008996555.2 | XP_008994803.1 | tumor necrosis factor ligand superfamily member 13 isoform X4 |
| XM_008996554.2 | XP_008994802.1 | tumor necrosis factor ligand superfamily member 13 isoform X3 |
| XM_008996556.2 | XP_008994804.1 | tumor necrosis factor ligand superfamily member 13 isoform X5 |
| XM_008996553.2 | XP_008994801.1 | tumor necrosis factor ligand superfamily member 13 isoform X3 |
| NM_001205140.1 | NP_001192069.1 | tumor necrosis factor ligand superfamily member 13 |
Comparative genomic analysis of eutherian tumor necrosis factor ligand genes.
Premzl M
Immunogenetics68(2)125-32(2016 Feb)
De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences.
Maudhoo MD, Ren D, Gradnigo JS, Gibbs RM, Lubker AC, Moriyama EN, French JA, Norgren RB Jr
GigaScience314(2014)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following TNFSF13 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the TNFSF13 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
| CloneID | OCb00023 | |
| Clone ID Related Accession (Same CDS sequence) | XM_008996554.2 , XM_008996553.2 , NM_001205140.1 | |
| Accession Version | NM_001205140.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 753bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2019-05-04 | |
| Organism | Callithrix jacchus(white-tufted-ear marmoset) | |
| Product | tumor necrosis factor ligand superfamily member 13 | |
| Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from ACFV01148752.1. Sequence Note: This RefSeq record was created from genomic sequence data to make the sequence consistent with the reference genome assembly. There are no marmoset transcripts representing this gene; the genomic coordinates used for the transcript record were predicted based on full-length homologous alignment with human NM_003808.3. ##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMN02055993, SAMN03282368 [ECO:0000348] ##Evidence-Data-END## | |
1 | ATGCCAGCCT CATCTCCTTT CTTGCTAGCC CCCAAAGGGC CTCCAGGCAA CATGGGGGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001192069.1 |
| CDS | 726..1478 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_001205140.1 |
1 | ATGCCAGCCT CATCTCCTTT CTTGCTAGCC CCCAAAGGGC CTCCAGGCAA CATGGGGGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OCb00023 | |
| Clone ID Related Accession (Same CDS sequence) | XM_008996554.2 , XM_008996553.2 , NM_001205140.1 | |
| Accession Version | XM_008996554.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 753bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2016-08-30 | |
| Organism | Callithrix jacchus(white-tufted-ear marmoset) | |
| Product | tumor necrosis factor ligand superfamily member 13 isoform X3 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_013900.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 31, 2016 this sequence version replaced XM_008996554.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Callithrix jacchus Annotation Release 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGCCAGCCT CATCTCCTTT CTTGCTAGCC CCCAAAGGGC CTCCAGGCAA CATGGGGGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_008994802.1 |
| CDS | 778..1530 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_008996554.2 |
1 | ATGCCAGCCT CATCTCCTTT CTTGCTAGCC CCCAAAGGGC CTCCAGGCAA CATGGGGGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OCb00023 | |
| Clone ID Related Accession (Same CDS sequence) | XM_008996554.2 , XM_008996553.2 , NM_001205140.1 | |
| Accession Version | XM_008996553.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 753bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2016-08-30 | |
| Organism | Callithrix jacchus(white-tufted-ear marmoset) | |
| Product | tumor necrosis factor ligand superfamily member 13 isoform X3 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_013900.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 31, 2016 this sequence version replaced XM_008996553.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Callithrix jacchus Annotation Release 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGCCAGCCT CATCTCCTTT CTTGCTAGCC CCCAAAGGGC CTCCAGGCAA CATGGGGGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_008994801.1 |
| CDS | 778..1530 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_008996553.2 |
1 | ATGCCAGCCT CATCTCCTTT CTTGCTAGCC CCCAAAGGGC CTCCAGGCAA CATGGGGGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OCb42426 | |
| Clone ID Related Accession (Same CDS sequence) | XM_008996551.2 | |
| Accession Version | XM_008996551.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 933bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2016-08-30 | |
| Organism | Callithrix jacchus(white-tufted-ear marmoset) | |
| Product | tumor necrosis factor ligand superfamily member 13 isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_013900.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 31, 2016 this sequence version replaced XM_008996551.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Callithrix jacchus Annotation Release 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGCCAGCCT CATCTCCTTT CTTGCTAGCC CCCAAAGGGC CTCCAGGCAA CATGGGGGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_008994799.1 |
| CDS | 778..1710 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_008996551.2 |
1 | ATGCCAGCCT CATCTCCTTT CTTGCTAGCC CCCAAAGGGC CTCCAGGCAA CATGGGGGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OCb42427 | |
| Clone ID Related Accession (Same CDS sequence) | XM_008996552.2 | |
| Accession Version | XM_008996552.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 789bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2016-08-30 | |
| Organism | Callithrix jacchus(white-tufted-ear marmoset) | |
| Product | tumor necrosis factor ligand superfamily member 13 isoform X2 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_013900.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 31, 2016 this sequence version replaced XM_008996552.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Callithrix jacchus Annotation Release 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGCCAGCCT CATCTCCTTT CTTGCTAGCC CCCAAAGGGC CTCCAGGCAA CATGGGGGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_008994800.1 |
| CDS | 778..1566 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_008996552.2 |
1 | ATGCCAGCCT CATCTCCTTT CTTGCTAGCC CCCAAAGGGC CTCCAGGCAA CATGGGGGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OCb42428 | |
| Clone ID Related Accession (Same CDS sequence) | XM_008996555.2 | |
| Accession Version | XM_008996555.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 744bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2016-08-30 | |
| Organism | Callithrix jacchus(white-tufted-ear marmoset) | |
| Product | tumor necrosis factor ligand superfamily member 13 isoform X4 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_013900.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 31, 2016 this sequence version replaced XM_008996555.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Callithrix jacchus Annotation Release 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGCCAGCCT CATCTCCTTT CTTGCTAGCC CCCAAAGGGC CTCCAGGCAA CATGGGGGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_008994803.1 |
| CDS | 778..1521 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_008996555.2 |
1 | ATGCCAGCCT CATCTCCTTT CTTGCTAGCC CCCAAAGGGC CTCCAGGCAA CATGGGGGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OCb42429 | |
| Clone ID Related Accession (Same CDS sequence) | XM_008996556.2 | |
| Accession Version | XM_008996556.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 708bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2016-08-30 | |
| Organism | Callithrix jacchus(white-tufted-ear marmoset) | |
| Product | tumor necrosis factor ligand superfamily member 13 isoform X5 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_013900.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 31, 2016 this sequence version replaced XM_008996556.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Callithrix jacchus Annotation Release 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGCCAGCCT CATCTCCTTT CTTGCTAGCC CCCAAAGGGC CTCCAGGCAA CATGGGGGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_008994804.1 |
| CDS | 778..1485 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_008996556.2 |
1 | ATGCCAGCCT CATCTCCTTT CTTGCTAGCC CCCAAAGGGC CTCCAGGCAA CATGGGGGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Comparative genomic analysis of eutherian tumor necrosis factor ligand genes. |
De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. |