pat-2 cDNA ORF clone, Caenorhabditis elegans

Gene
Clones
gRNAs

Summary

Gene Symbol	pat-2
Entrez Gene ID	176240
Full Name	Integrin alpha pat-2
Gene Type	protein-coding
Organism	Caenorhabditis elegans

mRNA and Protein(s)

mRNA	Protein	Name
NM_066547.3	NP_498948.1	Integrin alpha pat-2
NM_066547.4	NP_498948.1	Integrin alpha pat-2

Pathways from BioSystems

Homologies

Gallus gallus (chicken)	ITGA8	NP_990619.1
Caenorhabditis elegans (roundworm)	pat-2	NP_498948.1
Pan troglodytes (chimpanzee)	ITGA8	XP_507671.2
Bos taurus (cattle)	ITGA8	XP_002692127.1
	ITGA8	XP_001089317.1
Drosophila melanogaster (fruit fly)	if	NP_001162778.1
Canis lupus familiaris (dog)	ITGA8	XP_005617255.1
Mus musculus (house mouse)	Itga8	NP_001001309.1
Homo sapiens (human)	ITGA8	NP_003629.1
Rattus norvegicus (Norway rat)	Itga8	NP_001167443.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP000032	XP_311131.5
Xenopus tropicalis (tropical clawed frog)	itga8	XP_002939074.2

Gene Ontology
Bibliography

Related articles in PubMed

Genome sequence of the nematode C. elegans: a platform for investigating biology.

Science (New York, N.Y.)282(5396)2012-8(1998 Dec)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

Taken together, the cytoplasmic tails of alpha integrins can bypass signaling from members of the Rho family of GTPases during development.
Title: ? integrin cytoplasmic tails can rescue the loss of Rho-family GTPase signaling in the C. elegans somatic gonad.

The formation of such halos depends on the integrins PAT-2/PAT-3, UNC-112 and the GEF protein UIG-1, but not on the canonical ced-1/6/7 or ced-2/5/12 signaling modules
Title: Small GTPase CDC-42 promotes apoptotic cell corpse clearance in response to PAT-2 and CED-1 in C. elegans.

Our data suggest that PAT-2 functions through UIG-1 for CDC-42 activation, which in turn leads to cytoskeletal rearrangement and apoptotic cell internalization by muscle cells.
Title: Integrin ? PAT-2/CDC-42 signaling is required for muscle-mediated clearance of apoptotic cells in Caenorhabditis elegans.

down-regulation of ina-1 is necessary for distal tip cell migration cessation and the up-regulation of pat-2 is required for directionality
Title: Control of C. elegans hermaphrodite gonad size and shape by vab-3/Pax6-mediated regulation of integrin receptors.

The following pat-2 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the pat-2 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
OCa341475	NM_066547.4 Latest version!	Caenorhabditis elegans Integrin alpha pat-2 (pat-2), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$643.30 $919.00
View Old Accession Versions >>
OCa341475	NM_066547.3	Caenorhabditis elegans Integrin alpha pat-2 (pat-2), partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$713.30 $1019.00
Hide Old Accession Versions >>

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

pat-2 ( NM_066547.3 ) cDNA ORF clone, Caenorhabditis elegans -> NP_498948.1 Caenorhabditis elegans Integrin alpha pat-2 (pat-2), partial mRNA.

Price & Availability↑

CloneID	OCa341475
Clone ID Related Accession (Same CDS sequence)	NM_066547.3 , NM_066547.4
Accession Version	NM_066547.3	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3681bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-08
Organism	Caenorhabditis elegans
Product	Integrin alpha pat-2
Comment	Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003281). On Jun 26, 2012 this sequence version replaced NM_066547.2. COMPLETENESS: incomplete on both ends.

ATGCGAGAGG GTAGTTTTCC GCGAAGGATC GGCTTGCTTC TAGGCTTACT GGGCCTTTTA 
GCCGGAGTTG CCACCTTCAA CATCGACACA AAAAATGTAG TGGTTCATCA CATGGCTGGT 
AACTACTTTG GATACTCACT CGATTTTTAC CATGAGCAGA AGGGAATGCC TGTCCTCGTT 
GTCGGTGCCC CTGAAGCTGA AAGCAATAAC CCAAACCTGG CTGGAATCCG AAGACCTGGA 
GCAGTTTATG CTTGCTCCGT GAACCGGGCA ACATGCCGAG AAGTCCACGT GGATAAAATG 
AAGGGAAACT TGAAGAAACT CAATGGATCA CATCTTGTTC CAATTGAAGA AAAATCACAT 
CAATTCTTTG GTGCAACTGT TCGATCAAAT GATAAGCATG ATAAAATTGT GGTGTGTGCT 
CCAAAATACA CATATTTCTA CTCAAAATTC GAAGTTATTG AGCCAGTTGG AACCTGTTTC 
TATGCTGAAA ATGGATTTGA TAATGCGGAG GAGTTTTCAT CGTGCAAACA AGAACCTGCT 
CGCCACGGTC GTCATCGTCT TGGATACGGT CAGTGCGGAT TCTCGGCTGC AGTTCCAGGA 
AAGAAGAATC AAAATCGTGT TTTTATTGGA GCCCCCGGTG TGTGGTATTG GCAAGGAGCA 
ATGTTCTCAC AGAACATCAA AAATCAGACA GACCGCCCGA ATACCGAGTA CGGTAGCAAG 
GAATACGATC ACGATATGAT GGGATATTCT ACAGCAACTG GAGATTTTGA TGGAGATGGT 
ATTGATGATA TTGTTGCCGG AGTTCCACGT GGAAACGATT TGCACGGAAA ATTGGTGTTA 
TACACGTCGA AACTGAAGAT GATGATCAAT TTGACTGATG AGGTGTCAAC TCAACATGGA 
CAATATTGTG GAGGATCTGT TGCAGTTGCT GATGTAAATA AAGATGGACG CGACGACATT 
ATCATGGGCT GCCCATTCTA CACAGATTAC GGTAGCGTGA AAGACGCAAA AACACAAGAA 
AGAAAACCAC AATACGATGT CGGAAAGGTC ATTGTGATGC TTCAAACTGC TCCAGGAGTC 
TTTGGAAAAC AGATTGCAGT TGTTGGAGAT GATCAGTGGG GACGATTTGG ACACGCAGTC 
GCAGCAGCTG GAGACTTGAA TTTGGATGGT TATAATGATG TAATTGTTGG TGCACCATAT 
GCTGGAAAAA ACAAACAAGG AGCTGTTTAT GTGATCCACG GATCCAAAGA TGGTGTTCGC 
GAACTACCAA CTCAGAAGAT CGAAGGAGCC AATATTGGTC ATGGAAATAT CAAATCATTT 
GGCTTCTCCC TTACTGGAAA CGAAGATGTT GATGGAAATG GAATGCCAGA CATTGCAGTT 
GGAGCATGGA AATCTGGAAA TGCAGCTGTT TTACTCACAA AACCAGTTGT CACTGTCACG 
GGACAAACTG AACCAGAGAG TGCATTGATC AGTGTAGAAG ATAAGAATTG CGATGTTGAT 
GGAAAATTGG GAAAACAGGC ATGCAAACAT ATTAATACAT GTTTCAAATA TGAAGGAAAA 
GGAGATACAC CAAATGATTT GGAATTTGAT CTTCGATTCA ATCTTGATGA TCATTCTCCT 
GAACCAAGAG CTTATTTCTT GCAAAAAGAT GTGAAATCTG ACAGAAGCAT TAAAGTTGCA 
CAAGGATCTA AAACAAGAGA CCATCCATCT TCAATCGAAC AACGTGTTCG TCTTGAGAAG 
GGACGACAAA AGTGTTTCAG ACATCGATTC TTTGCTTCTT CCACAATGAA AGACAAGCTC 
TCCCCAATTC ATTGGTCCGT CAACTACACA TATGTTGAAT CAAAAACCGG AAAACTTCGT 
GGTGATAAGC TTGAACCAGC AATTGACACA ACTGTACCAC TTTCATTCCA AAATAAGATT 
AATATTGCAA ATAATTGTGG AAAAGATGAT CTTTGTGTTC CTGATTTGAA GGTTACCGCT 
GTTGCTGATC GTGAGAAATT CCTTTTGGGA ACTCAAGACA ATACAATGCT TATCAATGTA 
ACAGTTCAAA ATGGAGGAGA AGATTCATAT GAGACAAAAC TTTATTTCGA TGTTCCACAA 
GGATTCGAAT ACGGTGGAAT TGAAAGTGTT GGTGGAGATG GAAGCAAGTC TGCTCCAGCT 
TGTTCTCCAA CTTCCGATGA ACCAGATTCG GATGGAAAAT GGACTTTTGC ATGTGATCTC 
GGCAATCCAC TTCCAGCTAA CAAAGTAGTT AGTAGTGTTG TAAGAGTGAC TGCTTCTTCT 
GATAAACCTC CACTTGCTCC AATCAGTATT AATGCTCATG TGAACAGTAG TAATGATGAA 
GAAGCTCATA CTGTTGCTGA TAATAAAGTC ACATTCACTA TTCCAGTTGA TTTTAAGAAT 
CAATTGAGTT TGAATGGTAG ATCAAATCCC GAACAAGTCG ATTTCTCAAT GACGAACAAA 
ACACGTGTAG ATGCTTTCGA TGACAATGAA ATTGGTCCAG TTGTTTCACA TCTTTATCAA 
ATCAGTAATC GTGGTCCATC TGAGGTTGAC TCAGCTACTT TGGATATCTT CTGGCCATCA 
TTTTCCACTG AAGGAGGTCA TCTTCTGTAC ATTATCACAG AACCAGTTGT TAATCCACCA 
AATAAAGGAA GATGTCGGGT CAAACAACTG CAAAATGTTA ATCCATTGAA TTTGAGGATA 
ACAAATGAGC ATGTTCCAAC TGAACCACCA GTTGCCAAGA CACCAAATGA ATATTCAAGA 
GAAGAAGATG ATGAATCATA TGAAGATGAA ACAACAACTC AATCCCAATC AACACGTCAT 
CAATCTACAC AACATCAAAC TCATCATCAA TCTGGTCCAG TACATGTATA CGAAAAAGAC 
GAGGAGAAGA TTCGTCAGAA TACTGGAAAT TGGCAATATG TTGAGGATAA AAAGAAGAAG 
GGAGATTATG AATATATTCC AGACGATCAG GAATATGATG GAGATGATTT TGAAGAGGAA 
GATGATGAAG ATTTTGATAG AGCTGGAAGT AAGAGAGTTA AAAGAAATCC AACACCAAAG 
AAGAAGAAGA AGGGAGGAGA ACACCGTGGT GAACCAAGAA GTGATAAGGC TAGATTCTCT 
GATCTTCGTG AAGCTGTTAA ACTTTCGAAG GAAGCTGGAG GAGTTGTTGA TTATAAGGGA 
CCACTATCAA GAGCATCTGT TGATTGTAAT TCATTGAGAT GTACACATAT TGAATGTGAT 
ATTTATGATC TTAAAGAAGA CGAGTTTGTA CTTGTGGAAA TCTTCTCTAG ATTATACACA 
AACACATTGG TTGATGAGAA AAATCCTGGA GGAGACATTT CATCGTTGGC TCTTGCTCGT 
GTCACATCTA CTAAATACAA TCTTCCACAT AAGCCAACAT TGATAACAGC AGTATCTACA 
AATATGAATG CAATTGCTTC TGAAGAAGGA AGAGATCTTC CTTGGTGGCT TTATCTTTTG 
GCTATTCTTA TTGGACTTGC CATTTTGATT CTTCTTATTT TACTGCTCTG GAGGTGTGGT 
TTCTTCAAAC GTAATCGTCC ACCAACTGAG CATGCAGAAC TCCGTGCCGA CCGTCAACCA 
AATGCTCAAT ACGCTGATAG TCAATCCCGT TATACATCAC AAGATCAGTA CAATCAGGGA 
CGTCACGGAC AAATGCTATA A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_498948.1
CDS	1..3681
Translation	MREGSFPRRIGLLLGLLGLLAGVATFNIDTKNVVVHHMAGNYFGYSLDFYHEQKGMPVLVVGAPEAESNNPNLAGIRRPGAVYACSVNRATCREVHVDKMKGNLKKLNGSHLVPIEEKSHQFFGATVRSNDKHDKIVVCAPKYTYFYSKFEVIEPVGTCFYAENGFDNAEEFSSCKQEPARHGRHRLGYGQCGFSAAVPGKKNQNRVFIGAPGVWYWQGAMFSQNIKNQTDRPNTEYGSKEYDHDMMGYSTATGDFDGDGIDDIVAGVPRGNDLHGKLVLYTSKLKMMINLTDEVSTQHGQYCGGSVAVADVNKDGRDDIIMGCPFYTDYGSVKDAKTQERKPQYDVGKVIVMLQTAPGVFGKQIAVVGDDQWGRFGHAVAAAGDLNLDGYNDVIVGAPYAGKNKQGAVYVIHGSKDGVRELPTQKIEGANIGHGNIKSFGFSLTGNEDVDGNGMPDIAVGAWKSGNAAVLLTKPVVTVTGQTEPESALISVEDKNCDVDGKLGKQACKHINTCFKYEGKGDTPNDLEFDLRFNLDDHSPEPRAYFLQKDVKSDRSIKVAQGSKTRDHPSSIEQRVRLEKGRQKCFRHRFFASSTMKDKLSPIHWSVNYTYVESKTGKLRGDKLEPAIDTTVPLSFQNKINIANNCGKDDLCVPDLKVTAVADREKFLLGTQDNTMLINVTVQNGGEDSYETKLYFDVPQGFEYGGIESVGGDGSKSAPACSPTSDEPDSDGKWTFACDLGNPLPANKVVSSVVRVTASSDKPPLAPISINAHVNSSNDEEAHTVADNKVTFTIPVDFKNQLSLNGRSNPEQVDFSMTNKTRVDAFDDNEIGPVVSHLYQISNRGPSEVDSATLDIFWPSFSTEGGHLLYIITEPVVNPPNKGRCRVKQLQNVNPLNLRITNEHVPTEPPVAKTPNEYSREEDDESYEDETTTQSQSTRHQSTQHQTHHQSGPVHVYEKDEEKIRQNTGNWQYVEDKKKKGDYEYIPDDQEYDGDDFEEEDDEDFDRAGSKRVKRNPTPKKKKKGGEHRGEPRSDKARFSDLREAVKLSKEAGGVVDYKGPLSRASVDCNSLRCTHIECDIYDLKEDEFVLVEIFSRLYTNTLVDEKNPGGDISSLALARVTSTKYNLPHKPTLITAVSTNMNAIASEEGRDLPWWLYLLAILIGLAILILLILLLWRCGFFKRNRPPTEHAELRADRQPNAQYADSQSRYTSQDQYNQGRHGQML

Target ORF information:

RefSeq Version	NM_066547.3
Organism	Caenorhabditis elegans
Definition	Caenorhabditis elegans Integrin alpha pat-2 (pat-2), partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_066547.3

ORF Insert Sequence:

ATGCGAGAGG GTAGTTTTCC GCGAAGGATC GGCTTGCTTC TAGGCTTACT GGGCCTTTTA 
GCCGGAGTTG CCACCTTCAA CATCGACACA AAAAATGTAG TGGTTCATCA CATGGCTGGT 
AACTACTTTG GATACTCACT CGATTTTTAC CATGAGCAGA AGGGAATGCC TGTCCTCGTT 
GTCGGTGCCC CTGAAGCTGA AAGCAATAAC CCAAACCTGG CTGGAATCCG AAGACCTGGA 
GCAGTTTATG CTTGCTCCGT GAACCGGGCA ACATGCCGAG AAGTCCACGT GGATAAAATG 
AAGGGAAACT TGAAGAAACT CAATGGATCA CATCTTGTTC CAATTGAAGA AAAATCACAT 
CAATTCTTTG GTGCAACTGT TCGATCAAAT GATAAGCATG ATAAAATTGT GGTGTGTGCT 
CCAAAATACA CATATTTCTA CTCAAAATTC GAAGTTATTG AGCCAGTTGG AACCTGTTTC 
TATGCTGAAA ATGGATTTGA TAATGCGGAG GAGTTTTCAT CGTGCAAACA AGAACCTGCT 
CGCCACGGTC GTCATCGTCT TGGATACGGT CAGTGCGGAT TCTCGGCTGC AGTTCCAGGA 
AAGAAGAATC AAAATCGTGT TTTTATTGGA GCCCCCGGTG TGTGGTATTG GCAAGGAGCA 
ATGTTCTCAC AGAACATCAA AAATCAGACA GACCGCCCGA ATACCGAGTA CGGTAGCAAG 
GAATACGATC ACGATATGAT GGGATATTCT ACAGCAACTG GAGATTTTGA TGGAGATGGT 
ATTGATGATA TTGTTGCCGG AGTTCCACGT GGAAACGATT TGCACGGAAA ATTGGTGTTA 
TACACGTCGA AACTGAAGAT GATGATCAAT TTGACTGATG AGGTGTCAAC TCAACATGGA 
CAATATTGTG GAGGATCTGT TGCAGTTGCT GATGTAAATA AAGATGGACG CGACGACATT 
ATCATGGGCT GCCCATTCTA CACAGATTAC GGTAGCGTGA AAGACGCAAA AACACAAGAA 
AGAAAACCAC AATACGATGT CGGAAAGGTC ATTGTGATGC TTCAAACTGC TCCAGGAGTC 
TTTGGAAAAC AGATTGCAGT TGTTGGAGAT GATCAGTGGG GACGATTTGG ACACGCAGTC 
GCAGCAGCTG GAGACTTGAA TTTGGATGGT TATAATGATG TAATTGTTGG TGCACCATAT 
GCTGGAAAAA ACAAACAAGG AGCTGTTTAT GTGATCCACG GATCCAAAGA TGGTGTTCGC 
GAACTACCAA CTCAGAAGAT CGAAGGAGCC AATATTGGTC ATGGAAATAT CAAATCATTT 
GGCTTCTCCC TTACTGGAAA CGAAGATGTT GATGGAAATG GAATGCCAGA CATTGCAGTT 
GGAGCATGGA AATCTGGAAA TGCAGCTGTT TTACTCACAA AACCAGTTGT CACTGTCACG 
GGACAAACTG AACCAGAGAG TGCATTGATC AGTGTAGAAG ATAAGAATTG CGATGTTGAT 
GGAAAATTGG GAAAACAGGC ATGCAAACAT ATTAATACAT GTTTCAAATA TGAAGGAAAA 
GGAGATACAC CAAATGATTT GGAATTTGAT CTTCGATTCA ATCTTGATGA TCATTCTCCT 
GAACCAAGAG CTTATTTCTT GCAAAAAGAT GTGAAATCTG ACAGAAGCAT TAAAGTTGCA 
CAAGGATCTA AAACAAGAGA CCATCCATCT TCAATCGAAC AACGTGTTCG TCTTGAGAAG 
GGACGACAAA AGTGTTTCAG ACATCGATTC TTTGCTTCTT CCACAATGAA AGACAAGCTC 
TCCCCAATTC ATTGGTCCGT CAACTACACA TATGTTGAAT CAAAAACCGG AAAACTTCGT 
GGTGATAAGC TTGAACCAGC AATTGACACA ACTGTACCAC TTTCATTCCA AAATAAGATT 
AATATTGCAA ATAATTGTGG AAAAGATGAT CTTTGTGTTC CTGATTTGAA GGTTACCGCT 
GTTGCTGATC GTGAGAAATT CCTTTTGGGA ACTCAAGACA ATACAATGCT TATCAATGTA 
ACAGTTCAAA ATGGAGGAGA AGATTCATAT GAGACAAAAC TTTATTTCGA TGTTCCACAA 
GGATTCGAAT ACGGTGGAAT TGAAAGTGTT GGTGGAGATG GAAGCAAGTC TGCTCCAGCT 
TGTTCTCCAA CTTCCGATGA ACCAGATTCG GATGGAAAAT GGACTTTTGC ATGTGATCTC 
GGCAATCCAC TTCCAGCTAA CAAAGTAGTT AGTAGTGTTG TAAGAGTGAC TGCTTCTTCT 
GATAAACCTC CACTTGCTCC AATCAGTATT AATGCTCATG TGAACAGTAG TAATGATGAA 
GAAGCTCATA CTGTTGCTGA TAATAAAGTC ACATTCACTA TTCCAGTTGA TTTTAAGAAT 
CAATTGAGTT TGAATGGTAG ATCAAATCCC GAACAAGTCG ATTTCTCAAT GACGAACAAA 
ACACGTGTAG ATGCTTTCGA TGACAATGAA ATTGGTCCAG TTGTTTCACA TCTTTATCAA 
ATCAGTAATC GTGGTCCATC TGAGGTTGAC TCAGCTACTT TGGATATCTT CTGGCCATCA 
TTTTCCACTG AAGGAGGTCA TCTTCTGTAC ATTATCACAG AACCAGTTGT TAATCCACCA 
AATAAAGGAA GATGTCGGGT CAAACAACTG CAAAATGTTA ATCCATTGAA TTTGAGGATA 
ACAAATGAGC ATGTTCCAAC TGAACCACCA GTTGCCAAGA CACCAAATGA ATATTCAAGA 
GAAGAAGATG ATGAATCATA TGAAGATGAA ACAACAACTC AATCCCAATC AACACGTCAT 
CAATCTACAC AACATCAAAC TCATCATCAA TCTGGTCCAG TACATGTATA CGAAAAAGAC 
GAGGAGAAGA TTCGTCAGAA TACTGGAAAT TGGCAATATG TTGAGGATAA AAAGAAGAAG 
GGAGATTATG AATATATTCC AGACGATCAG GAATATGATG GAGATGATTT TGAAGAGGAA 
GATGATGAAG ATTTTGATAG AGCTGGAAGT AAGAGAGTTA AAAGAAATCC AACACCAAAG 
AAGAAGAAGA AGGGAGGAGA ACACCGTGGT GAACCAAGAA GTGATAAGGC TAGATTCTCT 
GATCTTCGTG AAGCTGTTAA ACTTTCGAAG GAAGCTGGAG GAGTTGTTGA TTATAAGGGA 
CCACTATCAA GAGCATCTGT TGATTGTAAT TCATTGAGAT GTACACATAT TGAATGTGAT 
ATTTATGATC TTAAAGAAGA CGAGTTTGTA CTTGTGGAAA TCTTCTCTAG ATTATACACA 
AACACATTGG TTGATGAGAA AAATCCTGGA GGAGACATTT CATCGTTGGC TCTTGCTCGT 
GTCACATCTA CTAAATACAA TCTTCCACAT AAGCCAACAT TGATAACAGC AGTATCTACA 
AATATGAATG CAATTGCTTC TGAAGAAGGA AGAGATCTTC CTTGGTGGCT TTATCTTTTG 
GCTATTCTTA TTGGACTTGC CATTTTGATT CTTCTTATTT TACTGCTCTG GAGGTGTGGT 
TTCTTCAAAC GTAATCGTCC ACCAACTGAG CATGCAGAAC TCCGTGCCGA CCGTCAACCA 
AATGCTCAAT ACGCTGATAG TCAATCCCGT TATACATCAC AAGATCAGTA CAATCAGGGA 
CGTCACGGAC AAATGCTATA A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

pat-2 ( NM_066547.4 ) cDNA ORF clone, Caenorhabditis elegans -> NP_498948.1 Caenorhabditis elegans Integrin alpha pat-2 (pat-2), mRNA.

Price & Availability↑

CloneID	OCa341475
Clone ID Related Accession (Same CDS sequence)	NM_066547.3 , NM_066547.4
Accession Version	NM_066547.4 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3681bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-10-17
Organism	Caenorhabditis elegans
Product	Integrin alpha pat-2
Comment	Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003281). On Sep 4, 2019 this sequence version replaced NM_066547.3.

ATGCGAGAGG GTAGTTTTCC GCGAAGGATC GGCTTGCTTC TAGGCTTACT GGGCCTTTTA 
GCCGGAGTTG CCACCTTCAA CATCGACACA AAAAATGTAG TGGTTCATCA CATGGCTGGT 
AACTACTTTG GATACTCACT CGATTTTTAC CATGAGCAGA AGGGAATGCC TGTCCTCGTT 
GTCGGTGCCC CTGAAGCTGA AAGCAATAAC CCAAACCTGG CTGGAATCCG AAGACCTGGA 
GCAGTTTATG CTTGCTCCGT GAACCGGGCA ACATGCCGAG AAGTCCACGT GGATAAAATG 
AAGGGAAACT TGAAGAAACT CAATGGATCA CATCTTGTTC CAATTGAAGA AAAATCACAT 
CAATTCTTTG GTGCAACTGT TCGATCAAAT GATAAGCATG ATAAAATTGT GGTGTGTGCT 
CCAAAATACA CATATTTCTA CTCAAAATTC GAAGTTATTG AGCCAGTTGG AACCTGTTTC 
TATGCTGAAA ATGGATTTGA TAATGCGGAG GAGTTTTCAT CGTGCAAACA AGAACCTGCT 
CGCCACGGTC GTCATCGTCT TGGATACGGT CAGTGCGGAT TCTCGGCTGC AGTTCCAGGA 
AAGAAGAATC AAAATCGTGT TTTTATTGGA GCCCCCGGTG TGTGGTATTG GCAAGGAGCA 
ATGTTCTCAC AGAACATCAA AAATCAGACA GACCGCCCGA ATACCGAGTA CGGTAGCAAG 
GAATACGATC ACGATATGAT GGGATATTCT ACAGCAACTG GAGATTTTGA TGGAGATGGT 
ATTGATGATA TTGTTGCCGG AGTTCCACGT GGAAACGATT TGCACGGAAA ATTGGTGTTA 
TACACGTCGA AACTGAAGAT GATGATCAAT TTGACTGATG AGGTGTCAAC TCAACATGGA 
CAATATTGTG GAGGATCTGT TGCAGTTGCT GATGTAAATA AAGATGGACG CGACGACATT 
ATCATGGGCT GCCCATTCTA CACAGATTAC GGTAGCGTGA AAGACGCAAA AACACAAGAA 
AGAAAACCAC AATACGATGT CGGAAAGGTC ATTGTGATGC TTCAAACTGC TCCAGGAGTC 
TTTGGAAAAC AGATTGCAGT TGTTGGAGAT GATCAGTGGG GACGATTTGG ACACGCAGTC 
GCAGCAGCTG GAGACTTGAA TTTGGATGGT TATAATGATG TAATTGTTGG TGCACCATAT 
GCTGGAAAAA ACAAACAAGG AGCTGTTTAT GTGATCCACG GATCCAAAGA TGGTGTTCGC 
GAACTACCAA CTCAGAAGAT CGAAGGAGCC AATATTGGTC ATGGAAATAT CAAATCATTT 
GGCTTCTCCC TTACTGGAAA CGAAGATGTT GATGGAAATG GAATGCCAGA CATTGCAGTT 
GGAGCATGGA AATCTGGAAA TGCAGCTGTT TTACTCACAA AACCAGTTGT CACTGTCACG 
GGACAAACTG AACCAGAGAG TGCATTGATC AGTGTAGAAG ATAAGAATTG CGATGTTGAT 
GGAAAATTGG GAAAACAGGC ATGCAAACAT ATTAATACAT GTTTCAAATA TGAAGGAAAA 
GGAGATACAC CAAATGATTT GGAATTTGAT CTTCGATTCA ATCTTGATGA TCATTCTCCT 
GAACCAAGAG CTTATTTCTT GCAAAAAGAT GTGAAATCTG ACAGAAGCAT TAAAGTTGCA 
CAAGGATCTA AAACAAGAGA CCATCCATCT TCAATCGAAC AACGTGTTCG TCTTGAGAAG 
GGACGACAAA AGTGTTTCAG ACATCGATTC TTTGCTTCTT CCACAATGAA AGACAAGCTC 
TCCCCAATTC ATTGGTCCGT CAACTACACA TATGTTGAAT CAAAAACCGG AAAACTTCGT 
GGTGATAAGC TTGAACCAGC AATTGACACA ACTGTACCAC TTTCATTCCA AAATAAGATT 
AATATTGCAA ATAATTGTGG AAAAGATGAT CTTTGTGTTC CTGATTTGAA GGTTACCGCT 
GTTGCTGATC GTGAGAAATT CCTTTTGGGA ACTCAAGACA ATACAATGCT TATCAATGTA 
ACAGTTCAAA ATGGAGGAGA AGATTCATAT GAGACAAAAC TTTATTTCGA TGTTCCACAA 
GGATTCGAAT ACGGTGGAAT TGAAAGTGTT GGTGGAGATG GAAGCAAGTC TGCTCCAGCT 
TGTTCTCCAA CTTCCGATGA ACCAGATTCG GATGGAAAAT GGACTTTTGC ATGTGATCTC 
GGCAATCCAC TTCCAGCTAA CAAAGTAGTT AGTAGTGTTG TAAGAGTGAC TGCTTCTTCT 
GATAAACCTC CACTTGCTCC AATCAGTATT AATGCTCATG TGAACAGTAG TAATGATGAA 
GAAGCTCATA CTGTTGCTGA TAATAAAGTC ACATTCACTA TTCCAGTTGA TTTTAAGAAT 
CAATTGAGTT TGAATGGTAG ATCAAATCCC GAACAAGTCG ATTTCTCAAT GACGAACAAA 
ACACGTGTAG ATGCTTTCGA TGACAATGAA ATTGGTCCAG TTGTTTCACA TCTTTATCAA 
ATCAGTAATC GTGGTCCATC TGAGGTTGAC TCAGCTACTT TGGATATCTT CTGGCCATCA 
TTTTCCACTG AAGGAGGTCA TCTTCTGTAC ATTATCACAG AACCAGTTGT TAATCCACCA 
AATAAAGGAA GATGTCGGGT CAAACAACTG CAAAATGTTA ATCCATTGAA TTTGAGGATA 
ACAAATGAGC ATGTTCCAAC TGAACCACCA GTTGCCAAGA CACCAAATGA ATATTCAAGA 
GAAGAAGATG ATGAATCATA TGAAGATGAA ACAACAACTC AATCCCAATC AACACGTCAT 
CAATCTACAC AACATCAAAC TCATCATCAA TCTGGTCCAG TACATGTATA CGAAAAAGAC 
GAGGAGAAGA TTCGTCAGAA TACTGGAAAT TGGCAATATG TTGAGGATAA AAAGAAGAAG 
GGAGATTATG AATATATTCC AGACGATCAG GAATATGATG GAGATGATTT TGAAGAGGAA 
GATGATGAAG ATTTTGATAG AGCTGGAAGT AAGAGAGTTA AAAGAAATCC AACACCAAAG 
AAGAAGAAGA AGGGAGGAGA ACACCGTGGT GAACCAAGAA GTGATAAGGC TAGATTCTCT 
GATCTTCGTG AAGCTGTTAA ACTTTCGAAG GAAGCTGGAG GAGTTGTTGA TTATAAGGGA 
CCACTATCAA GAGCATCTGT TGATTGTAAT TCATTGAGAT GTACACATAT TGAATGTGAT 
ATTTATGATC TTAAAGAAGA CGAGTTTGTA CTTGTGGAAA TCTTCTCTAG ATTATACACA 
AACACATTGG TTGATGAGAA AAATCCTGGA GGAGACATTT CATCGTTGGC TCTTGCTCGT 
GTCACATCTA CTAAATACAA TCTTCCACAT AAGCCAACAT TGATAACAGC AGTATCTACA 
AATATGAATG CAATTGCTTC TGAAGAAGGA AGAGATCTTC CTTGGTGGCT TTATCTTTTG 
GCTATTCTTA TTGGACTTGC CATTTTGATT CTTCTTATTT TACTGCTCTG GAGGTGTGGT 
TTCTTCAAAC GTAATCGTCC ACCAACTGAG CATGCAGAAC TCCGTGCCGA CCGTCAACCA 
AATGCTCAAT ACGCTGATAG TCAATCCCGT TATACATCAC AAGATCAGTA CAATCAGGGA 
CGTCACGGAC AAATGCTATA A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_498948.1
CDS	4..3684
Translation	MREGSFPRRIGLLLGLLGLLAGVATFNIDTKNVVVHHMAGNYFGYSLDFYHEQKGMPVLVVGAPEAESNNPNLAGIRRPGAVYACSVNRATCREVHVDKMKGNLKKLNGSHLVPIEEKSHQFFGATVRSNDKHDKIVVCAPKYTYFYSKFEVIEPVGTCFYAENGFDNAEEFSSCKQEPARHGRHRLGYGQCGFSAAVPGKKNQNRVFIGAPGVWYWQGAMFSQNIKNQTDRPNTEYGSKEYDHDMMGYSTATGDFDGDGIDDIVAGVPRGNDLHGKLVLYTSKLKMMINLTDEVSTQHGQYCGGSVAVADVNKDGRDDIIMGCPFYTDYGSVKDAKTQERKPQYDVGKVIVMLQTAPGVFGKQIAVVGDDQWGRFGHAVAAAGDLNLDGYNDVIVGAPYAGKNKQGAVYVIHGSKDGVRELPTQKIEGANIGHGNIKSFGFSLTGNEDVDGNGMPDIAVGAWKSGNAAVLLTKPVVTVTGQTEPESALISVEDKNCDVDGKLGKQACKHINTCFKYEGKGDTPNDLEFDLRFNLDDHSPEPRAYFLQKDVKSDRSIKVAQGSKTRDHPSSIEQRVRLEKGRQKCFRHRFFASSTMKDKLSPIHWSVNYTYVESKTGKLRGDKLEPAIDTTVPLSFQNKINIANNCGKDDLCVPDLKVTAVADREKFLLGTQDNTMLINVTVQNGGEDSYETKLYFDVPQGFEYGGIESVGGDGSKSAPACSPTSDEPDSDGKWTFACDLGNPLPANKVVSSVVRVTASSDKPPLAPISINAHVNSSNDEEAHTVADNKVTFTIPVDFKNQLSLNGRSNPEQVDFSMTNKTRVDAFDDNEIGPVVSHLYQISNRGPSEVDSATLDIFWPSFSTEGGHLLYIITEPVVNPPNKGRCRVKQLQNVNPLNLRITNEHVPTEPPVAKTPNEYSREEDDESYEDETTTQSQSTRHQSTQHQTHHQSGPVHVYEKDEEKIRQNTGNWQYVEDKKKKGDYEYIPDDQEYDGDDFEEEDDEDFDRAGSKRVKRNPTPKKKKKGGEHRGEPRSDKARFSDLREAVKLSKEAGGVVDYKGPLSRASVDCNSLRCTHIECDIYDLKEDEFVLVEIFSRLYTNTLVDEKNPGGDISSLALARVTSTKYNLPHKPTLITAVSTNMNAIASEEGRDLPWWLYLLAILIGLAILILLILLLWRCGFFKRNRPPTEHAELRADRQPNAQYADSQSRYTSQDQYNQGRHGQML

Target ORF information:

RefSeq Version	NM_066547.4
Organism	Caenorhabditis elegans
Definition	Caenorhabditis elegans Integrin alpha pat-2 (pat-2), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_066547.4

ORF Insert Sequence:

ATGCGAGAGG GTAGTTTTCC GCGAAGGATC GGCTTGCTTC TAGGCTTACT GGGCCTTTTA 
GCCGGAGTTG CCACCTTCAA CATCGACACA AAAAATGTAG TGGTTCATCA CATGGCTGGT 
AACTACTTTG GATACTCACT CGATTTTTAC CATGAGCAGA AGGGAATGCC TGTCCTCGTT 
GTCGGTGCCC CTGAAGCTGA AAGCAATAAC CCAAACCTGG CTGGAATCCG AAGACCTGGA 
GCAGTTTATG CTTGCTCCGT GAACCGGGCA ACATGCCGAG AAGTCCACGT GGATAAAATG 
AAGGGAAACT TGAAGAAACT CAATGGATCA CATCTTGTTC CAATTGAAGA AAAATCACAT 
CAATTCTTTG GTGCAACTGT TCGATCAAAT GATAAGCATG ATAAAATTGT GGTGTGTGCT 
CCAAAATACA CATATTTCTA CTCAAAATTC GAAGTTATTG AGCCAGTTGG AACCTGTTTC 
TATGCTGAAA ATGGATTTGA TAATGCGGAG GAGTTTTCAT CGTGCAAACA AGAACCTGCT 
CGCCACGGTC GTCATCGTCT TGGATACGGT CAGTGCGGAT TCTCGGCTGC AGTTCCAGGA 
AAGAAGAATC AAAATCGTGT TTTTATTGGA GCCCCCGGTG TGTGGTATTG GCAAGGAGCA 
ATGTTCTCAC AGAACATCAA AAATCAGACA GACCGCCCGA ATACCGAGTA CGGTAGCAAG 
GAATACGATC ACGATATGAT GGGATATTCT ACAGCAACTG GAGATTTTGA TGGAGATGGT 
ATTGATGATA TTGTTGCCGG AGTTCCACGT GGAAACGATT TGCACGGAAA ATTGGTGTTA 
TACACGTCGA AACTGAAGAT GATGATCAAT TTGACTGATG AGGTGTCAAC TCAACATGGA 
CAATATTGTG GAGGATCTGT TGCAGTTGCT GATGTAAATA AAGATGGACG CGACGACATT 
ATCATGGGCT GCCCATTCTA CACAGATTAC GGTAGCGTGA AAGACGCAAA AACACAAGAA 
AGAAAACCAC AATACGATGT CGGAAAGGTC ATTGTGATGC TTCAAACTGC TCCAGGAGTC 
TTTGGAAAAC AGATTGCAGT TGTTGGAGAT GATCAGTGGG GACGATTTGG ACACGCAGTC 
GCAGCAGCTG GAGACTTGAA TTTGGATGGT TATAATGATG TAATTGTTGG TGCACCATAT 
GCTGGAAAAA ACAAACAAGG AGCTGTTTAT GTGATCCACG GATCCAAAGA TGGTGTTCGC 
GAACTACCAA CTCAGAAGAT CGAAGGAGCC AATATTGGTC ATGGAAATAT CAAATCATTT 
GGCTTCTCCC TTACTGGAAA CGAAGATGTT GATGGAAATG GAATGCCAGA CATTGCAGTT 
GGAGCATGGA AATCTGGAAA TGCAGCTGTT TTACTCACAA AACCAGTTGT CACTGTCACG 
GGACAAACTG AACCAGAGAG TGCATTGATC AGTGTAGAAG ATAAGAATTG CGATGTTGAT 
GGAAAATTGG GAAAACAGGC ATGCAAACAT ATTAATACAT GTTTCAAATA TGAAGGAAAA 
GGAGATACAC CAAATGATTT GGAATTTGAT CTTCGATTCA ATCTTGATGA TCATTCTCCT 
GAACCAAGAG CTTATTTCTT GCAAAAAGAT GTGAAATCTG ACAGAAGCAT TAAAGTTGCA 
CAAGGATCTA AAACAAGAGA CCATCCATCT TCAATCGAAC AACGTGTTCG TCTTGAGAAG 
GGACGACAAA AGTGTTTCAG ACATCGATTC TTTGCTTCTT CCACAATGAA AGACAAGCTC 
TCCCCAATTC ATTGGTCCGT CAACTACACA TATGTTGAAT CAAAAACCGG AAAACTTCGT 
GGTGATAAGC TTGAACCAGC AATTGACACA ACTGTACCAC TTTCATTCCA AAATAAGATT 
AATATTGCAA ATAATTGTGG AAAAGATGAT CTTTGTGTTC CTGATTTGAA GGTTACCGCT 
GTTGCTGATC GTGAGAAATT CCTTTTGGGA ACTCAAGACA ATACAATGCT TATCAATGTA 
ACAGTTCAAA ATGGAGGAGA AGATTCATAT GAGACAAAAC TTTATTTCGA TGTTCCACAA 
GGATTCGAAT ACGGTGGAAT TGAAAGTGTT GGTGGAGATG GAAGCAAGTC TGCTCCAGCT 
TGTTCTCCAA CTTCCGATGA ACCAGATTCG GATGGAAAAT GGACTTTTGC ATGTGATCTC 
GGCAATCCAC TTCCAGCTAA CAAAGTAGTT AGTAGTGTTG TAAGAGTGAC TGCTTCTTCT 
GATAAACCTC CACTTGCTCC AATCAGTATT AATGCTCATG TGAACAGTAG TAATGATGAA 
GAAGCTCATA CTGTTGCTGA TAATAAAGTC ACATTCACTA TTCCAGTTGA TTTTAAGAAT 
CAATTGAGTT TGAATGGTAG ATCAAATCCC GAACAAGTCG ATTTCTCAAT GACGAACAAA 
ACACGTGTAG ATGCTTTCGA TGACAATGAA ATTGGTCCAG TTGTTTCACA TCTTTATCAA 
ATCAGTAATC GTGGTCCATC TGAGGTTGAC TCAGCTACTT TGGATATCTT CTGGCCATCA 
TTTTCCACTG AAGGAGGTCA TCTTCTGTAC ATTATCACAG AACCAGTTGT TAATCCACCA 
AATAAAGGAA GATGTCGGGT CAAACAACTG CAAAATGTTA ATCCATTGAA TTTGAGGATA 
ACAAATGAGC ATGTTCCAAC TGAACCACCA GTTGCCAAGA CACCAAATGA ATATTCAAGA 
GAAGAAGATG ATGAATCATA TGAAGATGAA ACAACAACTC AATCCCAATC AACACGTCAT 
CAATCTACAC AACATCAAAC TCATCATCAA TCTGGTCCAG TACATGTATA CGAAAAAGAC 
GAGGAGAAGA TTCGTCAGAA TACTGGAAAT TGGCAATATG TTGAGGATAA AAAGAAGAAG 
GGAGATTATG AATATATTCC AGACGATCAG GAATATGATG GAGATGATTT TGAAGAGGAA 
GATGATGAAG ATTTTGATAG AGCTGGAAGT AAGAGAGTTA AAAGAAATCC AACACCAAAG 
AAGAAGAAGA AGGGAGGAGA ACACCGTGGT GAACCAAGAA GTGATAAGGC TAGATTCTCT 
GATCTTCGTG AAGCTGTTAA ACTTTCGAAG GAAGCTGGAG GAGTTGTTGA TTATAAGGGA 
CCACTATCAA GAGCATCTGT TGATTGTAAT TCATTGAGAT GTACACATAT TGAATGTGAT 
ATTTATGATC TTAAAGAAGA CGAGTTTGTA CTTGTGGAAA TCTTCTCTAG ATTATACACA 
AACACATTGG TTGATGAGAA AAATCCTGGA GGAGACATTT CATCGTTGGC TCTTGCTCGT 
GTCACATCTA CTAAATACAA TCTTCCACAT AAGCCAACAT TGATAACAGC AGTATCTACA 
AATATGAATG CAATTGCTTC TGAAGAAGGA AGAGATCTTC CTTGGTGGCT TTATCTTTTG 
GCTATTCTTA TTGGACTTGC CATTTTGATT CTTCTTATTT TACTGCTCTG GAGGTGTGGT 
TTCTTCAAAC GTAATCGTCC ACCAACTGAG CATGCAGAAC TCCGTGCCGA CCGTCAACCA 
AATGCTCAAT ACGCTGATAG TCAATCCCGT TATACATCAC AAGATCAGTA CAATCAGGGA 
CGTCACGGAC AAATGCTATA A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Genome sequence of the nematode C. elegans: a platform for investigating biology.
Science (New York, N.Y.)282(5396)2012-8(1998 Dec)

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pat-2 cDNA ORF clone, Caenorhabditis elegans

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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