COL2A1 cDNA ORF clone, Bubalus bubalis(water buffalo)

The following COL2A1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the COL2A1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OBu64795 XM_006059438.2
Latest version!
Bubalus bubalis collagen type II alpha 1 chain (COL2A1), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 19-21 $727.30
$1039.00
OBu64796 XM_006059439.2
Latest version!
Bubalus bubalis collagen type II alpha 1 chain (COL2A1), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 19-21 $727.30
$1039.00
OBu16036 XM_006059438.1
Latest version!
Bubalus bubalis collagen, type II, alpha 1 (COL2A1), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector TBD $797.30
$1139.00
OBu16037 XM_006059439.1
Latest version!
Bubalus bubalis collagen, type II, alpha 1 (COL2A1), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector TBD $797.30
$1139.00
OBu16038 XM_006059440.1
Latest version!
Bubalus bubalis collagen, type II, alpha 1 (COL2A1), transcript variant X3, mRNA. pcDNA3.1-C-(k)DYK or customized vector TBD $797.30
$1139.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    CloneID OBu64795
    Clone ID Related Accession (Same CDS sequence) XM_006059438.2
    Accession Version XM_006059438.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 4464bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-06-23
    Organism Bubalus bubalis(water buffalo)
    Product collagen alpha-1(II) chain isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037548.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2018 this sequence version replaced XM_006059438.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bubalus bubalis Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    3481
    3541
    3601
    3661
    3721
    3781
    3841
    3901
    3961
    4021
    4081
    4141
    4201
    4261
    4321
    4381
    4441
    ATGATCCGCC TCGGGGCTCC CCAGACGCTG GTGCTGCTGA CGCTGCTCGT CGCCGCTGTC 
    CTTCGGTGTC ACGGCCAGGA TGTCCAGAAG GCTGGCAGCT GTGTGCAGGA CGGGCAGAGG
    TATAATGATA AGGATGTGTG GAAGCCCGAG CCCTGCCGGA TCTGTGTCTG TGACACTGGG
    ACTGTCCTCT GCGACGACAT AATCTGTGAA GACATGAAAG ACTGCCTCAG CCCCGAGACC
    CCCTTCGGAG AGTGCTGCCC CATCTGCTCA GCTGACCTCC CCACTGCCAG TGGGCAACCA
    GGACCAAAGG GACAGAAAGG AGAACCTGGA GATATCAAGG ACATCGTAGG ACCCAAGGGA
    CCTCCTGGAC CTCAGGGACC CGCAGGTGAA CAAGGACCCA GAGGTGATCG TGGTGACAAA
    GGTGAAAAAG GTGCTCCTGG ACCTCGTGGC AGAGATGGAG AGCCTGGGAC CCCTGGAAAC
    CCTGGCCCCC CTGGTCCTCC CGGCCCCCCC GGCCCCCCTG GCCTTGGTGG AAACTTTGCT
    GCCCAGATGG CTGGTGGATT TGATGAGAAG GCTGGTGGCG CCCAGATGGG AGTAATGCAG
    GGACCAATGG GCCCCATGGG ACCTCGGGGA CCCCCAGGCC CTGCTGGTGC TCCCGGACCT
    CAAGGATTTC AAGGCAACCC TGGTGAACCT GGGGAACCCG GTGTTTCTGG TCCCATGGGG
    CCCCGTGGTC CTCCTGGCCC CCCTGGGAAA CCTGGTGATG ATGGTGAAGC TGGAAAGCCT
    GGAAAATCTG GCGAGAGAGG CCCTCCTGGC CCTCAGGGTG CTCGTGGTTT CCCAGGAACC
    CCAGGCCTTC CTGGTGTCAA AGGTCACAGG GGTTACCCAG GTCTAGATGG TGCTAAGGGA
    GAAGCTGGTG CTCCAGGTGT GAAGGGTGAG AGTGGTTCCC CAGGTGAGAA CGGTTCTCCA
    GGCCCAATGG GTCCCCGCGG CTTGCCTGGT GAGAGAGGAC GGACTGGCCC TGCCGGCGCT
    GCAGGCGCTC GAGGCAATGA CGGTCAACCA GGCCCTGCAG GGCCTCCGGG TCCTGTGGGT
    CCTGCTGGCG GTCCTGGCTT TCCTGGTGCT CCTGGTGCCA AGGGTGAAGC TGGCCCCACC
    GGTGCTCGAG GTCCCGAAGG CGCCCAGGGT CCTCGCGGTG AACCGGGTAC TCCTGGGTCC
    CCTGGGCCAG CTGGTGCTGC TGGCAACCCT GGAACTGATG GAATCCCTGG AGCCAAGGGA
    TCTGCTGGTG CCCCTGGCAT TGCTGGTGCT CCCGGCTTCC CTGGACCCCG TGGTCCACCC
    GGCCCTCAAG GTGCAACTGG TCCTCTGGGC CCGAAAGGTC AAACGGGTGA GCCTGGTATT
    GCTGGCTTCA AAGGCGAACA AGGCCCCAAG GGAGAACCGG GCCCTGCTGG TCCCCAAGGA
    GCCCCTGGTC CTGCTGGTGA AGAAGGGAAA AGAGGTGCCC GTGGAGAACC TGGTGGTGCT
    GGGCCCGCCG GTCCCCCTGG AGAAAGAGGT GCTCCTGGAA ACCGTGGTTT CCCAGGTCAG
    GATGGTCTGG CAGGTCCCAA GGGAGCCCCT GGAGAGCGAG GACCCAGTGG CCTTGCTGGT
    CCCAAGGGAG CCAACGGTGA CCCTGGCCGT CCTGGAGAGC CTGGCCTTCC TGGAGCCCGG
    GGTCTCACTG GTCGCCCTGG TGATGCTGGT CCTCAAGGCA AAGTTGGTCC TTCCGGAGCC
    CCTGGTGAAG ACGGTCGCCC TGGACCCCCA GGTCCTCAGG GGGCTCGTGG GCAGCCTGGT
    GTCATGGGTT TCCCTGGCCC CAAAGGTGCC AATGGTGAGC CTGGCAAAGC TGGTGAGAAA
    GGACTGCCTG GTGCTCCTGG TCTGAGAGGT CTTCCTGGCA AAGATGGTGA GACAGGTGCT
    GCAGGCCCCC CTGGACCCGC TGGACCAGCT GGTGAACGAG GCGAGCAGGG TGCTCCTGGG
    CCATCTGGGT TCCAGGGACT TCCTGGCCCT CCCGGCCCCC CAGGAGAAGG TGGAAAACCA
    GGTGACCAGG GTGTTCCTGG TGAAGCTGGA GCTCCTGGCC TCGTGGGTCC CAGGGGTGAA
    CGAGGTTTCC CAGGAGAACG TGGCTCCCCT GGCTCCCAGG GCCTCCAGGG GGCCCGCGGC
    CTCCCCGGCA CTCCTGGCAC TGATGGTCCC AAAGGCGCAG CTGGCCCAGC TGGCCCCCCT
    GGGGCTCAGG GCCCTCCAGG TCTGCAGGGC ATGCCCGGTG AGAGGGGAGC AGCTGGTATC
    GCCGGACCCA AGGGAGACAG GGGTGATGTT GGTGAGAAAG GCCCCGAGGG CGCCCCCGGG
    AAGGACGGTG GACGAGGTCT GACTGGCCCC ATTGGCCCCC CTGGCCCAGC CGGTGCCAAC
    GGTGAGAAGG GAGAAGTTGG ACCCCCTGGT CCTGCTGGAA CTGCTGGTGC TCGAGGTGCC
    CCGGGTGAAC GTGGAGAGAC AGGCCCCCCT GGACCCGCTG GATTCGCCGG TCCCCCTGGT
    GCTGATGGCC AGCCTGGTGC CAAAGGTGAA CAAGGAGAAG CCGGCCAGAA AGGTGACGCT
    GGTGCCCCCG GTCCTCAGGG CCCCTCTGGA GCTCCTGGGC CTCAGGGTCC TACTGGTGTG
    ACTGGTCCTA AAGGAGCCCG AGGTGCTCAA GGCCCCCCGG GAGCCACCGG ATTCCCCGGA
    GCAGCTGGCC GCGTCGGACC CCCAGGCTCC AATGGCAACC CTGGACCCCC CGGTCCTCCT
    GGTCCTTCTG GAAAAGATGG TCCTAAAGGT GCTCGAGGAG ACAGTGGCCC CCCTGGCCGA
    GCTGGTGACC CTGGCCTCCA AGGTCCTGCT GGACCCCCTG GCGAGAAGGG AGAGCCTGGA
    GATGATGGTC CTTCTGGTCC CGACGGTCCC CCAGGTCCTC AGGGTCTGGC TGGTCAGAGG
    GGCATCGTTG GTCTGCCTGG ACAGCGTGGT GAGCGAGGAT TCCCCGGCCT CCCCGGCCCC
    TCGGGTGAGC CTGGCAAGCA GGGAGCCCCT GGAGCATCTG GAGACCGAGG TCCCCCTGGC
    CCTGTGGGTC CTCCTGGCCT GACTGGTCCT GCTGGCGAGC CTGGACGTGA GGGAAGCCCC
    GGTGCTGACG GCCCCCCTGG CAGAGATGGC GCGGCTGGAG TCAAGGGTGA CCGTGGAGAG
    ACTGGTGCCG TGGGTGCCCC TGGAGCCCCC GGGCCCCCTG GCTCTCCTGG CCCCGCCGGC
    CCAGTTGGCA AGCAGGGAGA CCGAGGAGAA GCTGGCGCAC AAGGTCCCAT GGGACCTGCA
    GGACCTGCTG GAGCCCGGGG AATGCCAGGC CCTCAAGGCC CCCGAGGTGA CAAAGGAGAA
    ACTGGAGAGG CTGGCGAGAG GGGACTGAAG GGACACCGTG GCTTCACTGG TCTGCAGGGT
    CTGCCCGGCC CCCCTGGTCC TTCTGGAGAC CAGGGTGCTT CCGGTCCTGC AGGTCCTTCT
    GGCCCCAGAG GTCCTCCTGG CCCCGTCGGT CCCTCTGGCA AAGATGGTGC TAACGGAATC
    CCTGGCCCCA TTGGACCTCC TGGGCCCCGT GGACGTTCCG GCGAGACTGG CCCTGCTGGT
    CCTCCTGGAA ACCCTGGACC CCCTGGCCCT CCTGGCCCCC CTGGCCCTGG CATCGACATG
    TCTGCCTTTG CTGGCCTTGG CCAGAGAGAG AAGGGCCCTG ATCCTCTGCA GTACATGCGG
    GCCGACGAGG CAGCCGGCAA CCTGAGACAG CATGATGCCG AGGTGGACGC CACACTCAAG
    TCCCTCAACA ACCAGATCGA GAGCCTCCGC AGCCCCGAGG GCTCCCGCAA GAACCCAGCT
    CGCACCTGCC GAGACCTGAA ACTCTGCCAC CCTGAGTGGA AGAGCGGAGA CTACTGGATC
    GACCCCAACC AGGGCTGCAC CCTGGATGCC ATGAAGGTTT TCTGCAACAT GGAGACTGGC
    GAGACCTGCG TCTACCCCAA CCCGGCCAGC GTCCCCAAGA AGAACTGGTG GAGCAGCAAG
    AGCAAGGACA AGAAACACAT CTGGTTTGGA GAAACCATCA ACGGTGGCTT CCACTTCAGC
    TATGGAGATG ACAACCTGGC TCCCAACACC GCCAACGTCC AGATGACCTT CCTGCGCCTG
    CTGTCCACCG AGGGCTCTCA GAACATCACC TACCACTGCA AGAACAGCAT TGCCTACCTG
    GACGAAGCTG CTGGCAACCT CAAGAAGGCT CTGCTCATCC AGGGCTCCAA CGATGTGGAG
    ATCCGGGCTG AGGGCAACAG CAGGTTCACA TACACCGTTC TGAAGGATGG CTGCACGAAA
    CACACCGGTA AGTGGGGCAA GACTATGATC GAGTACCGGT CACAGAAGAC CTCCCGTCTG
    CCCATCATTG ACATTGCACC CATGGACATA GGAGGGCCCG AGCAGGAATT CGGTGTGGAC
    ATAGGGCCTG TCTGCTTCTT GTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006059500.1
    CDS227..4690
    Translation

    Target ORF information:

    RefSeq Version XM_006059438.2
    Organism Bubalus bubalis(water buffalo)
    Definition Bubalus bubalis collagen type II alpha 1 chain (COL2A1), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_006059438.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    3481
    3541
    3601
    3661
    3721
    3781
    3841
    3901
    3961
    4021
    4081
    4141
    4201
    4261
    4321
    4381
    4441
    ATGATCCGCC TCGGGGCTCC CCAGACGCTG GTGCTGCTGA CGCTGCTCGT CGCCGCTGTC 
    CTTCGGTGTC ACGGCCAGGA TGTCCAGAAG GCTGGCAGCT GTGTGCAGGA CGGGCAGAGG
    TATAATGATA AGGATGTGTG GAAGCCCGAG CCCTGCCGGA TCTGTGTCTG TGACACTGGG
    ACTGTCCTCT GCGACGACAT AATCTGTGAA GACATGAAAG ACTGCCTCAG CCCCGAGACC
    CCCTTCGGAG AGTGCTGCCC CATCTGCTCA GCTGACCTCC CCACTGCCAG TGGGCAACCA
    GGACCAAAGG GACAGAAAGG AGAACCTGGA GATATCAAGG ACATCGTAGG ACCCAAGGGA
    CCTCCTGGAC CTCAGGGACC CGCAGGTGAA CAAGGACCCA GAGGTGATCG TGGTGACAAA
    GGTGAAAAAG GTGCTCCTGG ACCTCGTGGC AGAGATGGAG AGCCTGGGAC CCCTGGAAAC
    CCTGGCCCCC CTGGTCCTCC CGGCCCCCCC GGCCCCCCTG GCCTTGGTGG AAACTTTGCT
    GCCCAGATGG CTGGTGGATT TGATGAGAAG GCTGGTGGCG CCCAGATGGG AGTAATGCAG
    GGACCAATGG GCCCCATGGG ACCTCGGGGA CCCCCAGGCC CTGCTGGTGC TCCCGGACCT
    CAAGGATTTC AAGGCAACCC TGGTGAACCT GGGGAACCCG GTGTTTCTGG TCCCATGGGG
    CCCCGTGGTC CTCCTGGCCC CCCTGGGAAA CCTGGTGATG ATGGTGAAGC TGGAAAGCCT
    GGAAAATCTG GCGAGAGAGG CCCTCCTGGC CCTCAGGGTG CTCGTGGTTT CCCAGGAACC
    CCAGGCCTTC CTGGTGTCAA AGGTCACAGG GGTTACCCAG GTCTAGATGG TGCTAAGGGA
    GAAGCTGGTG CTCCAGGTGT GAAGGGTGAG AGTGGTTCCC CAGGTGAGAA CGGTTCTCCA
    GGCCCAATGG GTCCCCGCGG CTTGCCTGGT GAGAGAGGAC GGACTGGCCC TGCCGGCGCT
    GCAGGCGCTC GAGGCAATGA CGGTCAACCA GGCCCTGCAG GGCCTCCGGG TCCTGTGGGT
    CCTGCTGGCG GTCCTGGCTT TCCTGGTGCT CCTGGTGCCA AGGGTGAAGC TGGCCCCACC
    GGTGCTCGAG GTCCCGAAGG CGCCCAGGGT CCTCGCGGTG AACCGGGTAC TCCTGGGTCC
    CCTGGGCCAG CTGGTGCTGC TGGCAACCCT GGAACTGATG GAATCCCTGG AGCCAAGGGA
    TCTGCTGGTG CCCCTGGCAT TGCTGGTGCT CCCGGCTTCC CTGGACCCCG TGGTCCACCC
    GGCCCTCAAG GTGCAACTGG TCCTCTGGGC CCGAAAGGTC AAACGGGTGA GCCTGGTATT
    GCTGGCTTCA AAGGCGAACA AGGCCCCAAG GGAGAACCGG GCCCTGCTGG TCCCCAAGGA
    GCCCCTGGTC CTGCTGGTGA AGAAGGGAAA AGAGGTGCCC GTGGAGAACC TGGTGGTGCT
    GGGCCCGCCG GTCCCCCTGG AGAAAGAGGT GCTCCTGGAA ACCGTGGTTT CCCAGGTCAG
    GATGGTCTGG CAGGTCCCAA GGGAGCCCCT GGAGAGCGAG GACCCAGTGG CCTTGCTGGT
    CCCAAGGGAG CCAACGGTGA CCCTGGCCGT CCTGGAGAGC CTGGCCTTCC TGGAGCCCGG
    GGTCTCACTG GTCGCCCTGG TGATGCTGGT CCTCAAGGCA AAGTTGGTCC TTCCGGAGCC
    CCTGGTGAAG ACGGTCGCCC TGGACCCCCA GGTCCTCAGG GGGCTCGTGG GCAGCCTGGT
    GTCATGGGTT TCCCTGGCCC CAAAGGTGCC AATGGTGAGC CTGGCAAAGC TGGTGAGAAA
    GGACTGCCTG GTGCTCCTGG TCTGAGAGGT CTTCCTGGCA AAGATGGTGA GACAGGTGCT
    GCAGGCCCCC CTGGACCCGC TGGACCAGCT GGTGAACGAG GCGAGCAGGG TGCTCCTGGG
    CCATCTGGGT TCCAGGGACT TCCTGGCCCT CCCGGCCCCC CAGGAGAAGG TGGAAAACCA
    GGTGACCAGG GTGTTCCTGG TGAAGCTGGA GCTCCTGGCC TCGTGGGTCC CAGGGGTGAA
    CGAGGTTTCC CAGGAGAACG TGGCTCCCCT GGCTCCCAGG GCCTCCAGGG GGCCCGCGGC
    CTCCCCGGCA CTCCTGGCAC TGATGGTCCC AAAGGCGCAG CTGGCCCAGC TGGCCCCCCT
    GGGGCTCAGG GCCCTCCAGG TCTGCAGGGC ATGCCCGGTG AGAGGGGAGC AGCTGGTATC
    GCCGGACCCA AGGGAGACAG GGGTGATGTT GGTGAGAAAG GCCCCGAGGG CGCCCCCGGG
    AAGGACGGTG GACGAGGTCT GACTGGCCCC ATTGGCCCCC CTGGCCCAGC CGGTGCCAAC
    GGTGAGAAGG GAGAAGTTGG ACCCCCTGGT CCTGCTGGAA CTGCTGGTGC TCGAGGTGCC
    CCGGGTGAAC GTGGAGAGAC AGGCCCCCCT GGACCCGCTG GATTCGCCGG TCCCCCTGGT
    GCTGATGGCC AGCCTGGTGC CAAAGGTGAA CAAGGAGAAG CCGGCCAGAA AGGTGACGCT
    GGTGCCCCCG GTCCTCAGGG CCCCTCTGGA GCTCCTGGGC CTCAGGGTCC TACTGGTGTG
    ACTGGTCCTA AAGGAGCCCG AGGTGCTCAA GGCCCCCCGG GAGCCACCGG ATTCCCCGGA
    GCAGCTGGCC GCGTCGGACC CCCAGGCTCC AATGGCAACC CTGGACCCCC CGGTCCTCCT
    GGTCCTTCTG GAAAAGATGG TCCTAAAGGT GCTCGAGGAG ACAGTGGCCC CCCTGGCCGA
    GCTGGTGACC CTGGCCTCCA AGGTCCTGCT GGACCCCCTG GCGAGAAGGG AGAGCCTGGA
    GATGATGGTC CTTCTGGTCC CGACGGTCCC CCAGGTCCTC AGGGTCTGGC TGGTCAGAGG
    GGCATCGTTG GTCTGCCTGG ACAGCGTGGT GAGCGAGGAT TCCCCGGCCT CCCCGGCCCC
    TCGGGTGAGC CTGGCAAGCA GGGAGCCCCT GGAGCATCTG GAGACCGAGG TCCCCCTGGC
    CCTGTGGGTC CTCCTGGCCT GACTGGTCCT GCTGGCGAGC CTGGACGTGA GGGAAGCCCC
    GGTGCTGACG GCCCCCCTGG CAGAGATGGC GCGGCTGGAG TCAAGGGTGA CCGTGGAGAG
    ACTGGTGCCG TGGGTGCCCC TGGAGCCCCC GGGCCCCCTG GCTCTCCTGG CCCCGCCGGC
    CCAGTTGGCA AGCAGGGAGA CCGAGGAGAA GCTGGCGCAC AAGGTCCCAT GGGACCTGCA
    GGACCTGCTG GAGCCCGGGG AATGCCAGGC CCTCAAGGCC CCCGAGGTGA CAAAGGAGAA
    ACTGGAGAGG CTGGCGAGAG GGGACTGAAG GGACACCGTG GCTTCACTGG TCTGCAGGGT
    CTGCCCGGCC CCCCTGGTCC TTCTGGAGAC CAGGGTGCTT CCGGTCCTGC AGGTCCTTCT
    GGCCCCAGAG GTCCTCCTGG CCCCGTCGGT CCCTCTGGCA AAGATGGTGC TAACGGAATC
    CCTGGCCCCA TTGGACCTCC TGGGCCCCGT GGACGTTCCG GCGAGACTGG CCCTGCTGGT
    CCTCCTGGAA ACCCTGGACC CCCTGGCCCT CCTGGCCCCC CTGGCCCTGG CATCGACATG
    TCTGCCTTTG CTGGCCTTGG CCAGAGAGAG AAGGGCCCTG ATCCTCTGCA GTACATGCGG
    GCCGACGAGG CAGCCGGCAA CCTGAGACAG CATGATGCCG AGGTGGACGC CACACTCAAG
    TCCCTCAACA ACCAGATCGA GAGCCTCCGC AGCCCCGAGG GCTCCCGCAA GAACCCAGCT
    CGCACCTGCC GAGACCTGAA ACTCTGCCAC CCTGAGTGGA AGAGCGGAGA CTACTGGATC
    GACCCCAACC AGGGCTGCAC CCTGGATGCC ATGAAGGTTT TCTGCAACAT GGAGACTGGC
    GAGACCTGCG TCTACCCCAA CCCGGCCAGC GTCCCCAAGA AGAACTGGTG GAGCAGCAAG
    AGCAAGGACA AGAAACACAT CTGGTTTGGA GAAACCATCA ACGGTGGCTT CCACTTCAGC
    TATGGAGATG ACAACCTGGC TCCCAACACC GCCAACGTCC AGATGACCTT CCTGCGCCTG
    CTGTCCACCG AGGGCTCTCA GAACATCACC TACCACTGCA AGAACAGCAT TGCCTACCTG
    GACGAAGCTG CTGGCAACCT CAAGAAGGCT CTGCTCATCC AGGGCTCCAA CGATGTGGAG
    ATCCGGGCTG AGGGCAACAG CAGGTTCACA TACACCGTTC TGAAGGATGG CTGCACGAAA
    CACACCGGTA AGTGGGGCAA GACTATGATC GAGTACCGGT CACAGAAGAC CTCCCGTCTG
    CCCATCATTG ACATTGCACC CATGGACATA GGAGGGCCCG AGCAGGAATT CGGTGTGGAC
    ATAGGGCCTG TCTGCTTCTT GTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OBu64796
    Clone ID Related Accession (Same CDS sequence) XM_006059439.2
    Accession Version XM_006059439.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 4257bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-06-23
    Organism Bubalus bubalis(water buffalo)
    Product collagen alpha-1(II) chain isoform X2
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037548.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2018 this sequence version replaced XM_006059439.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bubalus bubalis Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    3481
    3541
    3601
    3661
    3721
    3781
    3841
    3901
    3961
    4021
    4081
    4141
    4201
    ATGATCCGCC TCGGGGCTCC CCAGACGCTG GTGCTGCTGA CGCTGCTCGT CGCCGCTGTC 
    CTTCGGTGTC ACGGCCAGGA TGTCCGGCAA CCAGGACCAA AGGGACAGAA AGGAGAACCT
    GGAGATATCA AGGACATCGT AGGACCCAAG GGACCTCCTG GACCTCAGGG ACCCGCAGGT
    GAACAAGGAC CCAGAGGTGA TCGTGGTGAC AAAGGTGAAA AAGGTGCTCC TGGACCTCGT
    GGCAGAGATG GAGAGCCTGG GACCCCTGGA AACCCTGGCC CCCCTGGTCC TCCCGGCCCC
    CCCGGCCCCC CTGGCCTTGG TGGAAACTTT GCTGCCCAGA TGGCTGGTGG ATTTGATGAG
    AAGGCTGGTG GCGCCCAGAT GGGAGTAATG CAGGGACCAA TGGGCCCCAT GGGACCTCGG
    GGACCCCCAG GCCCTGCTGG TGCTCCCGGA CCTCAAGGAT TTCAAGGCAA CCCTGGTGAA
    CCTGGGGAAC CCGGTGTTTC TGGTCCCATG GGGCCCCGTG GTCCTCCTGG CCCCCCTGGG
    AAACCTGGTG ATGATGGTGA AGCTGGAAAG CCTGGAAAAT CTGGCGAGAG AGGCCCTCCT
    GGCCCTCAGG GTGCTCGTGG TTTCCCAGGA ACCCCAGGCC TTCCTGGTGT CAAAGGTCAC
    AGGGGTTACC CAGGTCTAGA TGGTGCTAAG GGAGAAGCTG GTGCTCCAGG TGTGAAGGGT
    GAGAGTGGTT CCCCAGGTGA GAACGGTTCT CCAGGCCCAA TGGGTCCCCG CGGCTTGCCT
    GGTGAGAGAG GACGGACTGG CCCTGCCGGC GCTGCAGGCG CTCGAGGCAA TGACGGTCAA
    CCAGGCCCTG CAGGGCCTCC GGGTCCTGTG GGTCCTGCTG GCGGTCCTGG CTTTCCTGGT
    GCTCCTGGTG CCAAGGGTGA AGCTGGCCCC ACCGGTGCTC GAGGTCCCGA AGGCGCCCAG
    GGTCCTCGCG GTGAACCGGG TACTCCTGGG TCCCCTGGGC CAGCTGGTGC TGCTGGCAAC
    CCTGGAACTG ATGGAATCCC TGGAGCCAAG GGATCTGCTG GTGCCCCTGG CATTGCTGGT
    GCTCCCGGCT TCCCTGGACC CCGTGGTCCA CCCGGCCCTC AAGGTGCAAC TGGTCCTCTG
    GGCCCGAAAG GTCAAACGGG TGAGCCTGGT ATTGCTGGCT TCAAAGGCGA ACAAGGCCCC
    AAGGGAGAAC CGGGCCCTGC TGGTCCCCAA GGAGCCCCTG GTCCTGCTGG TGAAGAAGGG
    AAAAGAGGTG CCCGTGGAGA ACCTGGTGGT GCTGGGCCCG CCGGTCCCCC TGGAGAAAGA
    GGTGCTCCTG GAAACCGTGG TTTCCCAGGT CAGGATGGTC TGGCAGGTCC CAAGGGAGCC
    CCTGGAGAGC GAGGACCCAG TGGCCTTGCT GGTCCCAAGG GAGCCAACGG TGACCCTGGC
    CGTCCTGGAG AGCCTGGCCT TCCTGGAGCC CGGGGTCTCA CTGGTCGCCC TGGTGATGCT
    GGTCCTCAAG GCAAAGTTGG TCCTTCCGGA GCCCCTGGTG AAGACGGTCG CCCTGGACCC
    CCAGGTCCTC AGGGGGCTCG TGGGCAGCCT GGTGTCATGG GTTTCCCTGG CCCCAAAGGT
    GCCAATGGTG AGCCTGGCAA AGCTGGTGAG AAAGGACTGC CTGGTGCTCC TGGTCTGAGA
    GGTCTTCCTG GCAAAGATGG TGAGACAGGT GCTGCAGGCC CCCCTGGACC CGCTGGACCA
    GCTGGTGAAC GAGGCGAGCA GGGTGCTCCT GGGCCATCTG GGTTCCAGGG ACTTCCTGGC
    CCTCCCGGCC CCCCAGGAGA AGGTGGAAAA CCAGGTGACC AGGGTGTTCC TGGTGAAGCT
    GGAGCTCCTG GCCTCGTGGG TCCCAGGGGT GAACGAGGTT TCCCAGGAGA ACGTGGCTCC
    CCTGGCTCCC AGGGCCTCCA GGGGGCCCGC GGCCTCCCCG GCACTCCTGG CACTGATGGT
    CCCAAAGGCG CAGCTGGCCC AGCTGGCCCC CCTGGGGCTC AGGGCCCTCC AGGTCTGCAG
    GGCATGCCCG GTGAGAGGGG AGCAGCTGGT ATCGCCGGAC CCAAGGGAGA CAGGGGTGAT
    GTTGGTGAGA AAGGCCCCGA GGGCGCCCCC GGGAAGGACG GTGGACGAGG TCTGACTGGC
    CCCATTGGCC CCCCTGGCCC AGCCGGTGCC AACGGTGAGA AGGGAGAAGT TGGACCCCCT
    GGTCCTGCTG GAACTGCTGG TGCTCGAGGT GCCCCGGGTG AACGTGGAGA GACAGGCCCC
    CCTGGACCCG CTGGATTCGC CGGTCCCCCT GGTGCTGATG GCCAGCCTGG TGCCAAAGGT
    GAACAAGGAG AAGCCGGCCA GAAAGGTGAC GCTGGTGCCC CCGGTCCTCA GGGCCCCTCT
    GGAGCTCCTG GGCCTCAGGG TCCTACTGGT GTGACTGGTC CTAAAGGAGC CCGAGGTGCT
    CAAGGCCCCC CGGGAGCCAC CGGATTCCCC GGAGCAGCTG GCCGCGTCGG ACCCCCAGGC
    TCCAATGGCA ACCCTGGACC CCCCGGTCCT CCTGGTCCTT CTGGAAAAGA TGGTCCTAAA
    GGTGCTCGAG GAGACAGTGG CCCCCCTGGC CGAGCTGGTG ACCCTGGCCT CCAAGGTCCT
    GCTGGACCCC CTGGCGAGAA GGGAGAGCCT GGAGATGATG GTCCTTCTGG TCCCGACGGT
    CCCCCAGGTC CTCAGGGTCT GGCTGGTCAG AGGGGCATCG TTGGTCTGCC TGGACAGCGT
    GGTGAGCGAG GATTCCCCGG CCTCCCCGGC CCCTCGGGTG AGCCTGGCAA GCAGGGAGCC
    CCTGGAGCAT CTGGAGACCG AGGTCCCCCT GGCCCTGTGG GTCCTCCTGG CCTGACTGGT
    CCTGCTGGCG AGCCTGGACG TGAGGGAAGC CCCGGTGCTG ACGGCCCCCC TGGCAGAGAT
    GGCGCGGCTG GAGTCAAGGG TGACCGTGGA GAGACTGGTG CCGTGGGTGC CCCTGGAGCC
    CCCGGGCCCC CTGGCTCTCC TGGCCCCGCC GGCCCAGTTG GCAAGCAGGG AGACCGAGGA
    GAAGCTGGCG CACAAGGTCC CATGGGACCT GCAGGACCTG CTGGAGCCCG GGGAATGCCA
    GGCCCTCAAG GCCCCCGAGG TGACAAAGGA GAAACTGGAG AGGCTGGCGA GAGGGGACTG
    AAGGGACACC GTGGCTTCAC TGGTCTGCAG GGTCTGCCCG GCCCCCCTGG TCCTTCTGGA
    GACCAGGGTG CTTCCGGTCC TGCAGGTCCT TCTGGCCCCA GAGGTCCTCC TGGCCCCGTC
    GGTCCCTCTG GCAAAGATGG TGCTAACGGA ATCCCTGGCC CCATTGGACC TCCTGGGCCC
    CGTGGACGTT CCGGCGAGAC TGGCCCTGCT GGTCCTCCTG GAAACCCTGG ACCCCCTGGC
    CCTCCTGGCC CCCCTGGCCC TGGCATCGAC ATGTCTGCCT TTGCTGGCCT TGGCCAGAGA
    GAGAAGGGCC CTGATCCTCT GCAGTACATG CGGGCCGACG AGGCAGCCGG CAACCTGAGA
    CAGCATGATG CCGAGGTGGA CGCCACACTC AAGTCCCTCA ACAACCAGAT CGAGAGCCTC
    CGCAGCCCCG AGGGCTCCCG CAAGAACCCA GCTCGCACCT GCCGAGACCT GAAACTCTGC
    CACCCTGAGT GGAAGAGCGG AGACTACTGG ATCGACCCCA ACCAGGGCTG CACCCTGGAT
    GCCATGAAGG TTTTCTGCAA CATGGAGACT GGCGAGACCT GCGTCTACCC CAACCCGGCC
    AGCGTCCCCA AGAAGAACTG GTGGAGCAGC AAGAGCAAGG ACAAGAAACA CATCTGGTTT
    GGAGAAACCA TCAACGGTGG CTTCCACTTC AGCTATGGAG ATGACAACCT GGCTCCCAAC
    ACCGCCAACG TCCAGATGAC CTTCCTGCGC CTGCTGTCCA CCGAGGGCTC TCAGAACATC
    ACCTACCACT GCAAGAACAG CATTGCCTAC CTGGACGAAG CTGCTGGCAA CCTCAAGAAG
    GCTCTGCTCA TCCAGGGCTC CAACGATGTG GAGATCCGGG CTGAGGGCAA CAGCAGGTTC
    ACATACACCG TTCTGAAGGA TGGCTGCACG AAACACACCG GTAAGTGGGG CAAGACTATG
    ATCGAGTACC GGTCACAGAA GACCTCCCGT CTGCCCATCA TTGACATTGC ACCCATGGAC
    ATAGGAGGGC CCGAGCAGGA ATTCGGTGTG GACATAGGGC CTGTCTGCTT CTTGTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006059501.1
    CDS227..4483
    Translation

    Target ORF information:

    RefSeq Version XM_006059439.2
    Organism Bubalus bubalis(water buffalo)
    Definition Bubalus bubalis collagen type II alpha 1 chain (COL2A1), transcript variant X2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_006059439.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    3481
    3541
    3601
    3661
    3721
    3781
    3841
    3901
    3961
    4021
    4081
    4141
    4201
    ATGATCCGCC TCGGGGCTCC CCAGACGCTG GTGCTGCTGA CGCTGCTCGT CGCCGCTGTC 
    CTTCGGTGTC ACGGCCAGGA TGTCCGGCAA CCAGGACCAA AGGGACAGAA AGGAGAACCT
    GGAGATATCA AGGACATCGT AGGACCCAAG GGACCTCCTG GACCTCAGGG ACCCGCAGGT
    GAACAAGGAC CCAGAGGTGA TCGTGGTGAC AAAGGTGAAA AAGGTGCTCC TGGACCTCGT
    GGCAGAGATG GAGAGCCTGG GACCCCTGGA AACCCTGGCC CCCCTGGTCC TCCCGGCCCC
    CCCGGCCCCC CTGGCCTTGG TGGAAACTTT GCTGCCCAGA TGGCTGGTGG ATTTGATGAG
    AAGGCTGGTG GCGCCCAGAT GGGAGTAATG CAGGGACCAA TGGGCCCCAT GGGACCTCGG
    GGACCCCCAG GCCCTGCTGG TGCTCCCGGA CCTCAAGGAT TTCAAGGCAA CCCTGGTGAA
    CCTGGGGAAC CCGGTGTTTC TGGTCCCATG GGGCCCCGTG GTCCTCCTGG CCCCCCTGGG
    AAACCTGGTG ATGATGGTGA AGCTGGAAAG CCTGGAAAAT CTGGCGAGAG AGGCCCTCCT
    GGCCCTCAGG GTGCTCGTGG TTTCCCAGGA ACCCCAGGCC TTCCTGGTGT CAAAGGTCAC
    AGGGGTTACC CAGGTCTAGA TGGTGCTAAG GGAGAAGCTG GTGCTCCAGG TGTGAAGGGT
    GAGAGTGGTT CCCCAGGTGA GAACGGTTCT CCAGGCCCAA TGGGTCCCCG CGGCTTGCCT
    GGTGAGAGAG GACGGACTGG CCCTGCCGGC GCTGCAGGCG CTCGAGGCAA TGACGGTCAA
    CCAGGCCCTG CAGGGCCTCC GGGTCCTGTG GGTCCTGCTG GCGGTCCTGG CTTTCCTGGT
    GCTCCTGGTG CCAAGGGTGA AGCTGGCCCC ACCGGTGCTC GAGGTCCCGA AGGCGCCCAG
    GGTCCTCGCG GTGAACCGGG TACTCCTGGG TCCCCTGGGC CAGCTGGTGC TGCTGGCAAC
    CCTGGAACTG ATGGAATCCC TGGAGCCAAG GGATCTGCTG GTGCCCCTGG CATTGCTGGT
    GCTCCCGGCT TCCCTGGACC CCGTGGTCCA CCCGGCCCTC AAGGTGCAAC TGGTCCTCTG
    GGCCCGAAAG GTCAAACGGG TGAGCCTGGT ATTGCTGGCT TCAAAGGCGA ACAAGGCCCC
    AAGGGAGAAC CGGGCCCTGC TGGTCCCCAA GGAGCCCCTG GTCCTGCTGG TGAAGAAGGG
    AAAAGAGGTG CCCGTGGAGA ACCTGGTGGT GCTGGGCCCG CCGGTCCCCC TGGAGAAAGA
    GGTGCTCCTG GAAACCGTGG TTTCCCAGGT CAGGATGGTC TGGCAGGTCC CAAGGGAGCC
    CCTGGAGAGC GAGGACCCAG TGGCCTTGCT GGTCCCAAGG GAGCCAACGG TGACCCTGGC
    CGTCCTGGAG AGCCTGGCCT TCCTGGAGCC CGGGGTCTCA CTGGTCGCCC TGGTGATGCT
    GGTCCTCAAG GCAAAGTTGG TCCTTCCGGA GCCCCTGGTG AAGACGGTCG CCCTGGACCC
    CCAGGTCCTC AGGGGGCTCG TGGGCAGCCT GGTGTCATGG GTTTCCCTGG CCCCAAAGGT
    GCCAATGGTG AGCCTGGCAA AGCTGGTGAG AAAGGACTGC CTGGTGCTCC TGGTCTGAGA
    GGTCTTCCTG GCAAAGATGG TGAGACAGGT GCTGCAGGCC CCCCTGGACC CGCTGGACCA
    GCTGGTGAAC GAGGCGAGCA GGGTGCTCCT GGGCCATCTG GGTTCCAGGG ACTTCCTGGC
    CCTCCCGGCC CCCCAGGAGA AGGTGGAAAA CCAGGTGACC AGGGTGTTCC TGGTGAAGCT
    GGAGCTCCTG GCCTCGTGGG TCCCAGGGGT GAACGAGGTT TCCCAGGAGA ACGTGGCTCC
    CCTGGCTCCC AGGGCCTCCA GGGGGCCCGC GGCCTCCCCG GCACTCCTGG CACTGATGGT
    CCCAAAGGCG CAGCTGGCCC AGCTGGCCCC CCTGGGGCTC AGGGCCCTCC AGGTCTGCAG
    GGCATGCCCG GTGAGAGGGG AGCAGCTGGT ATCGCCGGAC CCAAGGGAGA CAGGGGTGAT
    GTTGGTGAGA AAGGCCCCGA GGGCGCCCCC GGGAAGGACG GTGGACGAGG TCTGACTGGC
    CCCATTGGCC CCCCTGGCCC AGCCGGTGCC AACGGTGAGA AGGGAGAAGT TGGACCCCCT
    GGTCCTGCTG GAACTGCTGG TGCTCGAGGT GCCCCGGGTG AACGTGGAGA GACAGGCCCC
    CCTGGACCCG CTGGATTCGC CGGTCCCCCT GGTGCTGATG GCCAGCCTGG TGCCAAAGGT
    GAACAAGGAG AAGCCGGCCA GAAAGGTGAC GCTGGTGCCC CCGGTCCTCA GGGCCCCTCT
    GGAGCTCCTG GGCCTCAGGG TCCTACTGGT GTGACTGGTC CTAAAGGAGC CCGAGGTGCT
    CAAGGCCCCC CGGGAGCCAC CGGATTCCCC GGAGCAGCTG GCCGCGTCGG ACCCCCAGGC
    TCCAATGGCA ACCCTGGACC CCCCGGTCCT CCTGGTCCTT CTGGAAAAGA TGGTCCTAAA
    GGTGCTCGAG GAGACAGTGG CCCCCCTGGC CGAGCTGGTG ACCCTGGCCT CCAAGGTCCT
    GCTGGACCCC CTGGCGAGAA GGGAGAGCCT GGAGATGATG GTCCTTCTGG TCCCGACGGT
    CCCCCAGGTC CTCAGGGTCT GGCTGGTCAG AGGGGCATCG TTGGTCTGCC TGGACAGCGT
    GGTGAGCGAG GATTCCCCGG CCTCCCCGGC CCCTCGGGTG AGCCTGGCAA GCAGGGAGCC
    CCTGGAGCAT CTGGAGACCG AGGTCCCCCT GGCCCTGTGG GTCCTCCTGG CCTGACTGGT
    CCTGCTGGCG AGCCTGGACG TGAGGGAAGC CCCGGTGCTG ACGGCCCCCC TGGCAGAGAT
    GGCGCGGCTG GAGTCAAGGG TGACCGTGGA GAGACTGGTG CCGTGGGTGC CCCTGGAGCC
    CCCGGGCCCC CTGGCTCTCC TGGCCCCGCC GGCCCAGTTG GCAAGCAGGG AGACCGAGGA
    GAAGCTGGCG CACAAGGTCC CATGGGACCT GCAGGACCTG CTGGAGCCCG GGGAATGCCA
    GGCCCTCAAG GCCCCCGAGG TGACAAAGGA GAAACTGGAG AGGCTGGCGA GAGGGGACTG
    AAGGGACACC GTGGCTTCAC TGGTCTGCAG GGTCTGCCCG GCCCCCCTGG TCCTTCTGGA
    GACCAGGGTG CTTCCGGTCC TGCAGGTCCT TCTGGCCCCA GAGGTCCTCC TGGCCCCGTC
    GGTCCCTCTG GCAAAGATGG TGCTAACGGA ATCCCTGGCC CCATTGGACC TCCTGGGCCC
    CGTGGACGTT CCGGCGAGAC TGGCCCTGCT GGTCCTCCTG GAAACCCTGG ACCCCCTGGC
    CCTCCTGGCC CCCCTGGCCC TGGCATCGAC ATGTCTGCCT TTGCTGGCCT TGGCCAGAGA
    GAGAAGGGCC CTGATCCTCT GCAGTACATG CGGGCCGACG AGGCAGCCGG CAACCTGAGA
    CAGCATGATG CCGAGGTGGA CGCCACACTC AAGTCCCTCA ACAACCAGAT CGAGAGCCTC
    CGCAGCCCCG AGGGCTCCCG CAAGAACCCA GCTCGCACCT GCCGAGACCT GAAACTCTGC
    CACCCTGAGT GGAAGAGCGG AGACTACTGG ATCGACCCCA ACCAGGGCTG CACCCTGGAT
    GCCATGAAGG TTTTCTGCAA CATGGAGACT GGCGAGACCT GCGTCTACCC CAACCCGGCC
    AGCGTCCCCA AGAAGAACTG GTGGAGCAGC AAGAGCAAGG ACAAGAAACA CATCTGGTTT
    GGAGAAACCA TCAACGGTGG CTTCCACTTC AGCTATGGAG ATGACAACCT GGCTCCCAAC
    ACCGCCAACG TCCAGATGAC CTTCCTGCGC CTGCTGTCCA CCGAGGGCTC TCAGAACATC
    ACCTACCACT GCAAGAACAG CATTGCCTAC CTGGACGAAG CTGCTGGCAA CCTCAAGAAG
    GCTCTGCTCA TCCAGGGCTC CAACGATGTG GAGATCCGGG CTGAGGGCAA CAGCAGGTTC
    ACATACACCG TTCTGAAGGA TGGCTGCACG AAACACACCG GTAAGTGGGG CAAGACTATG
    ATCGAGTACC GGTCACAGAA GACCTCCCGT CTGCCCATCA TTGACATTGC ACCCATGGAC
    ATAGGAGGGC CCGAGCAGGA ATTCGGTGTG GACATAGGGC CTGTCTGCTT CTTGTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OBu16036
    Clone ID Related Accession (Same CDS sequence) XM_006059438.1
    Accession Version XM_006059438.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 4464bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2014-03-11
    Organism Bubalus bubalis(water buffalo)
    Product collagen alpha-1(II) chain isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_005784912.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bubalus bubalis Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 5.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    3481
    3541
    3601
    3661
    3721
    3781
    3841
    3901
    3961
    4021
    4081
    4141
    4201
    4261
    4321
    4381
    4441
    ATGATCCGCC TCGGGGCTCC CCAGACGCTG GTGCTGCTGA CGCTGCTCGT CGCCGCTGTC 
    CTTCGGTGTC ACGGCCAGGA TGTCCAGAAG GCTGGCAGCT GTGTGCAGGA CGGGCAGAGG
    TATAATGATA AGGATGTGTG GAAGCCCGAG CCCTGCCGGA TCTGTGTCTG TGACACTGGG
    ACTGTCCTCT GCGACGACAT AATCTGTGAA GACATGAAAG ACTGCCTCAG CCCCGAGACC
    CCCTTCGGAG AGTGCTGCCC CATCTGCTCA GCTGACCTCC CCACTGCCAG TGGGCAACCA
    GGACCAAAGG GACAGAAAGG AGAACCTGGA GATATCAAGG ACATCGTAGG ACCCAAGGGA
    CCTCCTGGAC CTCAGGGACC CGCAGGTGAA CAAGGACCCA GAGGTGATCG TGGTGACAAA
    GGTGAAAAAG GTGCTCCTGG ACCTCGTGGC AGAGATGGAG AGCCTGGGAC CCCTGGAAAC
    CCTGGCCCCC CTGGTCCTCC CGGCCCCCCC GGCCCCCCTG GCCTTGGTGG AAACTTTGCT
    GCCCAGATGG CTGGTGGATT TGATGAGAAG GCTGGTGGCG CCCAGATGGG AGTAATGCAG
    GGACCAATGG GCCCCATGGG ACCTCGGGGA CCCCCAGGCC CTGCTGGTGC TCCCGGACCT
    CAAGGATTTC AAGGCAACCC TGGTGAACCT GGGGAACCCG GTGTTTCTGG TCCCATGGGG
    CCCCGTGGTC CTCCTGGCCC CCCTGGGAAA CCTGGTGATG ATGGTGAAGC TGGAAAGCCT
    GGAAAATCTG GCGAGAGAGG CCCTCCTGGC CCTCAGGGTG CTCGTGGTTT CCCAGGAACC
    CCAGGCCTTC CTGGTGTCAA AGGTCACAGA GGTTACCCAG GTCTAGATGG TGCTAAGGGA
    GAAGCTGGTG CTCCAGGTGT GAAGGGTGAG AGTGGTTCCC CAGGTGAGAA CGGTTCTCCA
    GGCCCAATGG GTCCCCGCGG CTTGCCTGGT GAGAGAGGAC GGACTGGCCC TGCCGGCGCT
    GCAGGCGCTC GAGGCAATGA CGGTCAACCA GGCCCTGCAG GGCCTCCGGG TCCTGTGGGT
    CCTGCTGGCG GTCCTGGCTT TCCTGGTGCT CCTGGTGCCA AGGGTGAAGC TGGCCCCACC
    GGTGCTCGAG GTCCCGAAGG CGCCCAGGGT CCTCGCGGTG AACCGGGTAC TCCTGGGTCC
    CCTGGGCCAG CTGGTGCTGC TGGCAACCCT GGAACTGATG GAATCCCTGG AGCCAAGGGA
    TCTGCTGGTG CCCCTGGCAT TGCTGGTGCT CCCGGCTTCC CTGGACCCCG TGGTCCACCC
    GGCCCTCAAG GTGCAACTGG TCCTCTGGGC CCGAAAGGTC AAACGGGTGA GCCTGGTATT
    GCTGGCTTCA AAGGCGAACA AGGCCCCAAG GGAGAACCGG GCCCTGCTGG TCCCCAAGGA
    GCCCCTGGTC CTGCTGGTGA AGAAGGGAAA AGAGGTGCCC GTGGAGAACC TGGTGGTGCT
    GGGCCCGCCG GTCCCCCTGG AGAAAGAGGT GCTCCTGGAA ACCGTGGTTT CCCAGGTCAG
    GATGGTCTGG CAGGTCCCAA GGGAGCCCCT GGAGAGCGAG GACCCAGTGG CCTTGCTGGT
    CCCAAGGGAG CCAACGGTGA CCCTGGCCGT CCTGGAGAGC CTGGCCTTCC TGGAGCCCGG
    GGTCTCACTG GTCGCCCTGG TGATGCTGGT CCTCAAGGCA AAGTTGGTCC TTCCGGAGCC
    CCTGGTGAAG ACGGTCGCCC TGGACCCCCA GGTCCTCAGG GGGCTCGTGG GCAGCCTGGT
    GTCATGGGTT TCCCTGGCCC CAAAGGTGCC AATGGTGAGC CTGGCAAAGC TGGTGAGAAA
    GGACTGCCTG GTGCTCCTGG TCTGAGAGGT CTTCCTGGCA AAGATGGTGA GACAGGTGCT
    GCAGGCCCCC CTGGACCCGC TGGACCAGCT GGTGAACGAG GCGAGCAGGG TGCTCCTGGG
    CCATCTGGGT TCCAGGGACT TCCTGGCCCT CCCGGCCCCC CAGGAGAAGG TGGAAAACCA
    GGTGACCAGG GTGTTCCTGG TGAAGCTGGA GCTCCTGGCC TCGTGGGTCC CAGGGGTGAA
    CGAGGTTTCC CAGGAGAACG TGGCTCCCCT GGCTCCCAGG GCCTCCAGGG GGCCCGCGGC
    CTCCCCGGCA CTCCTGGCAC TGATGGTCCC AAAGGCGCAG CTGGCCCAGC TGGCCCCCCT
    GGGGCTCAGG GCCCTCCAGG TCTGCAGGGC ATGCCCGGTG AGAGGGGAGC AGCTGGTATC
    GCCGGACCCA AGGGAGACAG GGGTGATGTT GGTGAGAAAG GCCCCGAGGG CGCCCCCGGG
    AAGGACGGTG GACGAGGTCT GACTGGCCCC ATTGGCCCCC CTGGCCCAGC CGGTGCCAAC
    GGTGAGAAGG GAGAAGTTGG ACCCCCTGGT CCTGCTGGAA CTGCTGGTGC TCGAGGTGCC
    CCGGGTGAAC GTGGAGAGAC AGGCCCCCCT GGACCCGCTG GATTCGCCGG TCCCCCTGGT
    GCTGATGGCC AGCCTGGTGC CAAAGGTGAA CAAGGAGAAG CCGGCCAGAA AGGTGACGCT
    GGTGCCCCCG GTCCTCAGGG CCCCTCTGGA GCTCCTGGGC CTCAGGGTCC TACTGGTGTG
    ACTGGTCCTA AAGGAGCCCG AGGTGCTCAA GGCCCCCCGG GAGCCACCGG ATTCCCCGGA
    GCAGCTGGCC GCGTCGGACC CCCAGGCTCC AATGGCAACC CTGGACCCCC CGGTCCTCCT
    GGTCCTTCTG GAAAAGATGG TCCTAAAGGT GCTCGAGGAG ACAGTGGCCC CCCTGGCCGA
    GCTGGTGACC CTGGCCTCCA AGGTCCTGCT GGACCCCCTG GCGAGAAGGG AGAGCCTGGA
    GATGATGGTC CTTCTGGTCC CGACGGTCCC CCAGGTCCTC AGGGTCTGGC TGGTCAGAGG
    GGCATCGTTG GTCTGCCTGG ACAGCGTGGT GAGCGAGGAT TCCCCGGCCT CCCCGGCCCC
    TCGGGTGAGC CTGGCAAGCA GGGAGCCCCT GGAGCATCTG GAGACCGAGG TCCCCCTGGC
    CCTGTGGGTC CTCCTGGCCT GACTGGTCCT GCTGGCGAGC CTGGACGTGA GGGAAGCCCC
    GGTGCTGACG GCCCCCCTGG CAGAGATGGC GCGGCTGGAG TCAAGGGTGA CCGTGGAGAG
    ACTGGTGCCG TGGGTGCCCC TGGAGCCCCC GGGCCCCCTG GCTCTCCTGG CCCCGCCGGC
    CCAGTTGGCA AGCAGGGAGA CCGAGGAGAG GCTGGCGCAC AAGGTCCCAT GGGACCTGCA
    GGACCTGCTG GAGCCCGGGG AATGCCAGGC CCTCAAGGCC CCCGAGGTGA CAAAGGAGAA
    ACTGGAGAGG CTGGCGAGAG GGGACTGAAG GGACACCGTG GCTTCACTGG TCTGCAGGGT
    CTGCCCGGCC CCCCTGGTCC TTCCGGAGAC CAGGGTGCTT CCGGTCCTGC AGGTCCTTCT
    GGCCCCAGAG GTCCTCCTGG CCCCGTCGGT CCCTCTGGCA AAGATGGTGC TAACGGAATC
    CCTGGCCCCA TTGGACCTCC TGGGCCCCGT GGACGTTCCG GCGAGACTGG CCCTGCTGGT
    CCTCCTGGAA ACCCTGGACC CCCTGGCCCT CCTGGCCCCC CTGGCCCTGG CATCGACATG
    TCTGCCTTTG CTGGCCTTGG CCAGAGAGAG AAGGGCCCTG ATCCTCTGCA GTACATGCGG
    GCCGACGAGG CAGCCGGCAA CCTGAGACAG CATGATGCCG AGGTGGACGC CACACTCAAG
    TCCCTCAACA ACCAGATCGA GAGCCTCCGC AGCCCCGAGG GCTCCCGCAA GAACCCAGCT
    CGCACCTGCC GAGACCTGAA ACTCTGCCAC CCTGAGTGGA AGAGCGGAGA CTACTGGATC
    GACCCCAACC AGGGCTGCAC CCTGGATGCC ATGAAGGTTT TCTGCAACAT GGAGACTGGC
    GAGACCTGCG TCTACCCCAA CCCGGCCAGC GTCCCCAAGA AGAACTGGTG GAGCAGCAAG
    AGCAAGGACA AGAAACACAT CTGGTTTGGA GAAACCATCA ACGGTGGCTT CCACTTCAGC
    TATGGAGATG ACAACCTGGC TCCCAACACC GCCAACGTCC AGATGACCTT CCTGCGCCTG
    CTGTCCACCG AGGGCTCTCA GAACATCACC TACCACTGCA AGAACAGCAT TGCCTACCTG
    GACGAAGCTG CTGGCAACCT CAAGAAGGCT CTGCTCATCC AGGGCTCCAA CGATGTGGAG
    ATCCGGGCTG AGGGCAACAG CAGGTTCACA TACACCGTTC TGAAGGATGG CTGCACGAAA
    CACACCGGTA AGTGGGGCAA GACTATGATC GAGTACCGGT CACAGAAGAC CTCCCGTCTG
    CCCATCATTG ACATTGCACC CATGGACATA GGAGGGCCCG AGCAGGAATT CGGTGTGGAC
    ATAGGGCCTG TCTGCTTCTT GTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006059500.1
    CDS162..4625
    Translation

    Target ORF information:

    RefSeq Version XM_006059438.1
    Organism Bubalus bubalis(water buffalo)
    Definition Bubalus bubalis collagen, type II, alpha 1 (COL2A1), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_006059438.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    3481
    3541
    3601
    3661
    3721
    3781
    3841
    3901
    3961
    4021
    4081
    4141
    4201
    4261
    4321
    4381
    4441
    ATGATCCGCC TCGGGGCTCC CCAGACGCTG GTGCTGCTGA CGCTGCTCGT CGCCGCTGTC 
    CTTCGGTGTC ACGGCCAGGA TGTCCAGAAG GCTGGCAGCT GTGTGCAGGA CGGGCAGAGG
    TATAATGATA AGGATGTGTG GAAGCCCGAG CCCTGCCGGA TCTGTGTCTG TGACACTGGG
    ACTGTCCTCT GCGACGACAT AATCTGTGAA GACATGAAAG ACTGCCTCAG CCCCGAGACC
    CCCTTCGGAG AGTGCTGCCC CATCTGCTCA GCTGACCTCC CCACTGCCAG TGGGCAACCA
    GGACCAAAGG GACAGAAAGG AGAACCTGGA GATATCAAGG ACATCGTAGG ACCCAAGGGA
    CCTCCTGGAC CTCAGGGACC CGCAGGTGAA CAAGGACCCA GAGGTGATCG TGGTGACAAA
    GGTGAAAAAG GTGCTCCTGG ACCTCGTGGC AGAGATGGAG AGCCTGGGAC CCCTGGAAAC
    CCTGGCCCCC CTGGTCCTCC CGGCCCCCCC GGCCCCCCTG GCCTTGGTGG AAACTTTGCT
    GCCCAGATGG CTGGTGGATT TGATGAGAAG GCTGGTGGCG CCCAGATGGG AGTAATGCAG
    GGACCAATGG GCCCCATGGG ACCTCGGGGA CCCCCAGGCC CTGCTGGTGC TCCCGGACCT
    CAAGGATTTC AAGGCAACCC TGGTGAACCT GGGGAACCCG GTGTTTCTGG TCCCATGGGG
    CCCCGTGGTC CTCCTGGCCC CCCTGGGAAA CCTGGTGATG ATGGTGAAGC TGGAAAGCCT
    GGAAAATCTG GCGAGAGAGG CCCTCCTGGC CCTCAGGGTG CTCGTGGTTT CCCAGGAACC
    CCAGGCCTTC CTGGTGTCAA AGGTCACAGA GGTTACCCAG GTCTAGATGG TGCTAAGGGA
    GAAGCTGGTG CTCCAGGTGT GAAGGGTGAG AGTGGTTCCC CAGGTGAGAA CGGTTCTCCA
    GGCCCAATGG GTCCCCGCGG CTTGCCTGGT GAGAGAGGAC GGACTGGCCC TGCCGGCGCT
    GCAGGCGCTC GAGGCAATGA CGGTCAACCA GGCCCTGCAG GGCCTCCGGG TCCTGTGGGT
    CCTGCTGGCG GTCCTGGCTT TCCTGGTGCT CCTGGTGCCA AGGGTGAAGC TGGCCCCACC
    GGTGCTCGAG GTCCCGAAGG CGCCCAGGGT CCTCGCGGTG AACCGGGTAC TCCTGGGTCC
    CCTGGGCCAG CTGGTGCTGC TGGCAACCCT GGAACTGATG GAATCCCTGG AGCCAAGGGA
    TCTGCTGGTG CCCCTGGCAT TGCTGGTGCT CCCGGCTTCC CTGGACCCCG TGGTCCACCC
    GGCCCTCAAG GTGCAACTGG TCCTCTGGGC CCGAAAGGTC AAACGGGTGA GCCTGGTATT
    GCTGGCTTCA AAGGCGAACA AGGCCCCAAG GGAGAACCGG GCCCTGCTGG TCCCCAAGGA
    GCCCCTGGTC CTGCTGGTGA AGAAGGGAAA AGAGGTGCCC GTGGAGAACC TGGTGGTGCT
    GGGCCCGCCG GTCCCCCTGG AGAAAGAGGT GCTCCTGGAA ACCGTGGTTT CCCAGGTCAG
    GATGGTCTGG CAGGTCCCAA GGGAGCCCCT GGAGAGCGAG GACCCAGTGG CCTTGCTGGT
    CCCAAGGGAG CCAACGGTGA CCCTGGCCGT CCTGGAGAGC CTGGCCTTCC TGGAGCCCGG
    GGTCTCACTG GTCGCCCTGG TGATGCTGGT CCTCAAGGCA AAGTTGGTCC TTCCGGAGCC
    CCTGGTGAAG ACGGTCGCCC TGGACCCCCA GGTCCTCAGG GGGCTCGTGG GCAGCCTGGT
    GTCATGGGTT TCCCTGGCCC CAAAGGTGCC AATGGTGAGC CTGGCAAAGC TGGTGAGAAA
    GGACTGCCTG GTGCTCCTGG TCTGAGAGGT CTTCCTGGCA AAGATGGTGA GACAGGTGCT
    GCAGGCCCCC CTGGACCCGC TGGACCAGCT GGTGAACGAG GCGAGCAGGG TGCTCCTGGG
    CCATCTGGGT TCCAGGGACT TCCTGGCCCT CCCGGCCCCC CAGGAGAAGG TGGAAAACCA
    GGTGACCAGG GTGTTCCTGG TGAAGCTGGA GCTCCTGGCC TCGTGGGTCC CAGGGGTGAA
    CGAGGTTTCC CAGGAGAACG TGGCTCCCCT GGCTCCCAGG GCCTCCAGGG GGCCCGCGGC
    CTCCCCGGCA CTCCTGGCAC TGATGGTCCC AAAGGCGCAG CTGGCCCAGC TGGCCCCCCT
    GGGGCTCAGG GCCCTCCAGG TCTGCAGGGC ATGCCCGGTG AGAGGGGAGC AGCTGGTATC
    GCCGGACCCA AGGGAGACAG GGGTGATGTT GGTGAGAAAG GCCCCGAGGG CGCCCCCGGG
    AAGGACGGTG GACGAGGTCT GACTGGCCCC ATTGGCCCCC CTGGCCCAGC CGGTGCCAAC
    GGTGAGAAGG GAGAAGTTGG ACCCCCTGGT CCTGCTGGAA CTGCTGGTGC TCGAGGTGCC
    CCGGGTGAAC GTGGAGAGAC AGGCCCCCCT GGACCCGCTG GATTCGCCGG TCCCCCTGGT
    GCTGATGGCC AGCCTGGTGC CAAAGGTGAA CAAGGAGAAG CCGGCCAGAA AGGTGACGCT
    GGTGCCCCCG GTCCTCAGGG CCCCTCTGGA GCTCCTGGGC CTCAGGGTCC TACTGGTGTG
    ACTGGTCCTA AAGGAGCCCG AGGTGCTCAA GGCCCCCCGG GAGCCACCGG ATTCCCCGGA
    GCAGCTGGCC GCGTCGGACC CCCAGGCTCC AATGGCAACC CTGGACCCCC CGGTCCTCCT
    GGTCCTTCTG GAAAAGATGG TCCTAAAGGT GCTCGAGGAG ACAGTGGCCC CCCTGGCCGA
    GCTGGTGACC CTGGCCTCCA AGGTCCTGCT GGACCCCCTG GCGAGAAGGG AGAGCCTGGA
    GATGATGGTC CTTCTGGTCC CGACGGTCCC CCAGGTCCTC AGGGTCTGGC TGGTCAGAGG
    GGCATCGTTG GTCTGCCTGG ACAGCGTGGT GAGCGAGGAT TCCCCGGCCT CCCCGGCCCC
    TCGGGTGAGC CTGGCAAGCA GGGAGCCCCT GGAGCATCTG GAGACCGAGG TCCCCCTGGC
    CCTGTGGGTC CTCCTGGCCT GACTGGTCCT GCTGGCGAGC CTGGACGTGA GGGAAGCCCC
    GGTGCTGACG GCCCCCCTGG CAGAGATGGC GCGGCTGGAG TCAAGGGTGA CCGTGGAGAG
    ACTGGTGCCG TGGGTGCCCC TGGAGCCCCC GGGCCCCCTG GCTCTCCTGG CCCCGCCGGC
    CCAGTTGGCA AGCAGGGAGA CCGAGGAGAG GCTGGCGCAC AAGGTCCCAT GGGACCTGCA
    GGACCTGCTG GAGCCCGGGG AATGCCAGGC CCTCAAGGCC CCCGAGGTGA CAAAGGAGAA
    ACTGGAGAGG CTGGCGAGAG GGGACTGAAG GGACACCGTG GCTTCACTGG TCTGCAGGGT
    CTGCCCGGCC CCCCTGGTCC TTCCGGAGAC CAGGGTGCTT CCGGTCCTGC AGGTCCTTCT
    GGCCCCAGAG GTCCTCCTGG CCCCGTCGGT CCCTCTGGCA AAGATGGTGC TAACGGAATC
    CCTGGCCCCA TTGGACCTCC TGGGCCCCGT GGACGTTCCG GCGAGACTGG CCCTGCTGGT
    CCTCCTGGAA ACCCTGGACC CCCTGGCCCT CCTGGCCCCC CTGGCCCTGG CATCGACATG
    TCTGCCTTTG CTGGCCTTGG CCAGAGAGAG AAGGGCCCTG ATCCTCTGCA GTACATGCGG
    GCCGACGAGG CAGCCGGCAA CCTGAGACAG CATGATGCCG AGGTGGACGC CACACTCAAG
    TCCCTCAACA ACCAGATCGA GAGCCTCCGC AGCCCCGAGG GCTCCCGCAA GAACCCAGCT
    CGCACCTGCC GAGACCTGAA ACTCTGCCAC CCTGAGTGGA AGAGCGGAGA CTACTGGATC
    GACCCCAACC AGGGCTGCAC CCTGGATGCC ATGAAGGTTT TCTGCAACAT GGAGACTGGC
    GAGACCTGCG TCTACCCCAA CCCGGCCAGC GTCCCCAAGA AGAACTGGTG GAGCAGCAAG
    AGCAAGGACA AGAAACACAT CTGGTTTGGA GAAACCATCA ACGGTGGCTT CCACTTCAGC
    TATGGAGATG ACAACCTGGC TCCCAACACC GCCAACGTCC AGATGACCTT CCTGCGCCTG
    CTGTCCACCG AGGGCTCTCA GAACATCACC TACCACTGCA AGAACAGCAT TGCCTACCTG
    GACGAAGCTG CTGGCAACCT CAAGAAGGCT CTGCTCATCC AGGGCTCCAA CGATGTGGAG
    ATCCGGGCTG AGGGCAACAG CAGGTTCACA TACACCGTTC TGAAGGATGG CTGCACGAAA
    CACACCGGTA AGTGGGGCAA GACTATGATC GAGTACCGGT CACAGAAGAC CTCCCGTCTG
    CCCATCATTG ACATTGCACC CATGGACATA GGAGGGCCCG AGCAGGAATT CGGTGTGGAC
    ATAGGGCCTG TCTGCTTCTT GTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OBu16037
    Clone ID Related Accession (Same CDS sequence) XM_006059439.1
    Accession Version XM_006059439.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 4257bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2014-03-11
    Organism Bubalus bubalis(water buffalo)
    Product collagen alpha-1(II) chain isoform X2
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_005784912.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bubalus bubalis Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 5.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    3481
    3541
    3601
    3661
    3721
    3781
    3841
    3901
    3961
    4021
    4081
    4141
    4201
    ATGATCCGCC TCGGGGCTCC CCAGACGCTG GTGCTGCTGA CGCTGCTCGT CGCCGCTGTC 
    CTTCGGTGTC ACGGCCAGGA TGTCCGGCAA CCAGGACCAA AGGGACAGAA AGGAGAACCT
    GGAGATATCA AGGACATCGT AGGACCCAAG GGACCTCCTG GACCTCAGGG ACCCGCAGGT
    GAACAAGGAC CCAGAGGTGA TCGTGGTGAC AAAGGTGAAA AAGGTGCTCC TGGACCTCGT
    GGCAGAGATG GAGAGCCTGG GACCCCTGGA AACCCTGGCC CCCCTGGTCC TCCCGGCCCC
    CCCGGCCCCC CTGGCCTTGG TGGAAACTTT GCTGCCCAGA TGGCTGGTGG ATTTGATGAG
    AAGGCTGGTG GCGCCCAGAT GGGAGTAATG CAGGGACCAA TGGGCCCCAT GGGACCTCGG
    GGACCCCCAG GCCCTGCTGG TGCTCCCGGA CCTCAAGGAT TTCAAGGCAA CCCTGGTGAA
    CCTGGGGAAC CCGGTGTTTC TGGTCCCATG GGGCCCCGTG GTCCTCCTGG CCCCCCTGGG
    AAACCTGGTG ATGATGGTGA AGCTGGAAAG CCTGGAAAAT CTGGCGAGAG AGGCCCTCCT
    GGCCCTCAGG GTGCTCGTGG TTTCCCAGGA ACCCCAGGCC TTCCTGGTGT CAAAGGTCAC
    AGAGGTTACC CAGGTCTAGA TGGTGCTAAG GGAGAAGCTG GTGCTCCAGG TGTGAAGGGT
    GAGAGTGGTT CCCCAGGTGA GAACGGTTCT CCAGGCCCAA TGGGTCCCCG CGGCTTGCCT
    GGTGAGAGAG GACGGACTGG CCCTGCCGGC GCTGCAGGCG CTCGAGGCAA TGACGGTCAA
    CCAGGCCCTG CAGGGCCTCC GGGTCCTGTG GGTCCTGCTG GCGGTCCTGG CTTTCCTGGT
    GCTCCTGGTG CCAAGGGTGA AGCTGGCCCC ACCGGTGCTC GAGGTCCCGA AGGCGCCCAG
    GGTCCTCGCG GTGAACCGGG TACTCCTGGG TCCCCTGGGC CAGCTGGTGC TGCTGGCAAC
    CCTGGAACTG ATGGAATCCC TGGAGCCAAG GGATCTGCTG GTGCCCCTGG CATTGCTGGT
    GCTCCCGGCT TCCCTGGACC CCGTGGTCCA CCCGGCCCTC AAGGTGCAAC TGGTCCTCTG
    GGCCCGAAAG GTCAAACGGG TGAGCCTGGT ATTGCTGGCT TCAAAGGCGA ACAAGGCCCC
    AAGGGAGAAC CGGGCCCTGC TGGTCCCCAA GGAGCCCCTG GTCCTGCTGG TGAAGAAGGG
    AAAAGAGGTG CCCGTGGAGA ACCTGGTGGT GCTGGGCCCG CCGGTCCCCC TGGAGAAAGA
    GGTGCTCCTG GAAACCGTGG TTTCCCAGGT CAGGATGGTC TGGCAGGTCC CAAGGGAGCC
    CCTGGAGAGC GAGGACCCAG TGGCCTTGCT GGTCCCAAGG GAGCCAACGG TGACCCTGGC
    CGTCCTGGAG AGCCTGGCCT TCCTGGAGCC CGGGGTCTCA CTGGTCGCCC TGGTGATGCT
    GGTCCTCAAG GCAAAGTTGG TCCTTCCGGA GCCCCTGGTG AAGACGGTCG CCCTGGACCC
    CCAGGTCCTC AGGGGGCTCG TGGGCAGCCT GGTGTCATGG GTTTCCCTGG CCCCAAAGGT
    GCCAATGGTG AGCCTGGCAA AGCTGGTGAG AAAGGACTGC CTGGTGCTCC TGGTCTGAGA
    GGTCTTCCTG GCAAAGATGG TGAGACAGGT GCTGCAGGCC CCCCTGGACC CGCTGGACCA
    GCTGGTGAAC GAGGCGAGCA GGGTGCTCCT GGGCCATCTG GGTTCCAGGG ACTTCCTGGC
    CCTCCCGGCC CCCCAGGAGA AGGTGGAAAA CCAGGTGACC AGGGTGTTCC TGGTGAAGCT
    GGAGCTCCTG GCCTCGTGGG TCCCAGGGGT GAACGAGGTT TCCCAGGAGA ACGTGGCTCC
    CCTGGCTCCC AGGGCCTCCA GGGGGCCCGC GGCCTCCCCG GCACTCCTGG CACTGATGGT
    CCCAAAGGCG CAGCTGGCCC AGCTGGCCCC CCTGGGGCTC AGGGCCCTCC AGGTCTGCAG
    GGCATGCCCG GTGAGAGGGG AGCAGCTGGT ATCGCCGGAC CCAAGGGAGA CAGGGGTGAT
    GTTGGTGAGA AAGGCCCCGA GGGCGCCCCC GGGAAGGACG GTGGACGAGG TCTGACTGGC
    CCCATTGGCC CCCCTGGCCC AGCCGGTGCC AACGGTGAGA AGGGAGAAGT TGGACCCCCT
    GGTCCTGCTG GAACTGCTGG TGCTCGAGGT GCCCCGGGTG AACGTGGAGA GACAGGCCCC
    CCTGGACCCG CTGGATTCGC CGGTCCCCCT GGTGCTGATG GCCAGCCTGG TGCCAAAGGT
    GAACAAGGAG AAGCCGGCCA GAAAGGTGAC GCTGGTGCCC CCGGTCCTCA GGGCCCCTCT
    GGAGCTCCTG GGCCTCAGGG TCCTACTGGT GTGACTGGTC CTAAAGGAGC CCGAGGTGCT
    CAAGGCCCCC CGGGAGCCAC CGGATTCCCC GGAGCAGCTG GCCGCGTCGG ACCCCCAGGC
    TCCAATGGCA ACCCTGGACC CCCCGGTCCT CCTGGTCCTT CTGGAAAAGA TGGTCCTAAA
    GGTGCTCGAG GAGACAGTGG CCCCCCTGGC CGAGCTGGTG ACCCTGGCCT CCAAGGTCCT
    GCTGGACCCC CTGGCGAGAA GGGAGAGCCT GGAGATGATG GTCCTTCTGG TCCCGACGGT
    CCCCCAGGTC CTCAGGGTCT GGCTGGTCAG AGGGGCATCG TTGGTCTGCC TGGACAGCGT
    GGTGAGCGAG GATTCCCCGG CCTCCCCGGC CCCTCGGGTG AGCCTGGCAA GCAGGGAGCC
    CCTGGAGCAT CTGGAGACCG AGGTCCCCCT GGCCCTGTGG GTCCTCCTGG CCTGACTGGT
    CCTGCTGGCG AGCCTGGACG TGAGGGAAGC CCCGGTGCTG ACGGCCCCCC TGGCAGAGAT
    GGCGCGGCTG GAGTCAAGGG TGACCGTGGA GAGACTGGTG CCGTGGGTGC CCCTGGAGCC
    CCCGGGCCCC CTGGCTCTCC TGGCCCCGCC GGCCCAGTTG GCAAGCAGGG AGACCGAGGA
    GAGGCTGGCG CACAAGGTCC CATGGGACCT GCAGGACCTG CTGGAGCCCG GGGAATGCCA
    GGCCCTCAAG GCCCCCGAGG TGACAAAGGA GAAACTGGAG AGGCTGGCGA GAGGGGACTG
    AAGGGACACC GTGGCTTCAC TGGTCTGCAG GGTCTGCCCG GCCCCCCTGG TCCTTCCGGA
    GACCAGGGTG CTTCCGGTCC TGCAGGTCCT TCTGGCCCCA GAGGTCCTCC TGGCCCCGTC
    GGTCCCTCTG GCAAAGATGG TGCTAACGGA ATCCCTGGCC CCATTGGACC TCCTGGGCCC
    CGTGGACGTT CCGGCGAGAC TGGCCCTGCT GGTCCTCCTG GAAACCCTGG ACCCCCTGGC
    CCTCCTGGCC CCCCTGGCCC TGGCATCGAC ATGTCTGCCT TTGCTGGCCT TGGCCAGAGA
    GAGAAGGGCC CTGATCCTCT GCAGTACATG CGGGCCGACG AGGCAGCCGG CAACCTGAGA
    CAGCATGATG CCGAGGTGGA CGCCACACTC AAGTCCCTCA ACAACCAGAT CGAGAGCCTC
    CGCAGCCCCG AGGGCTCCCG CAAGAACCCA GCTCGCACCT GCCGAGACCT GAAACTCTGC
    CACCCTGAGT GGAAGAGCGG AGACTACTGG ATCGACCCCA ACCAGGGCTG CACCCTGGAT
    GCCATGAAGG TTTTCTGCAA CATGGAGACT GGCGAGACCT GCGTCTACCC CAACCCGGCC
    AGCGTCCCCA AGAAGAACTG GTGGAGCAGC AAGAGCAAGG ACAAGAAACA CATCTGGTTT
    GGAGAAACCA TCAACGGTGG CTTCCACTTC AGCTATGGAG ATGACAACCT GGCTCCCAAC
    ACCGCCAACG TCCAGATGAC CTTCCTGCGC CTGCTGTCCA CCGAGGGCTC TCAGAACATC
    ACCTACCACT GCAAGAACAG CATTGCCTAC CTGGACGAAG CTGCTGGCAA CCTCAAGAAG
    GCTCTGCTCA TCCAGGGCTC CAACGATGTG GAGATCCGGG CTGAGGGCAA CAGCAGGTTC
    ACATACACCG TTCTGAAGGA TGGCTGCACG AAACACACCG GTAAGTGGGG CAAGACTATG
    ATCGAGTACC GGTCACAGAA GACCTCCCGT CTGCCCATCA TTGACATTGC ACCCATGGAC
    ATAGGAGGGC CCGAGCAGGA ATTCGGTGTG GACATAGGGC CTGTCTGCTT CTTGTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006059501.1
    CDS162..4418
    Translation

    Target ORF information:

    RefSeq Version XM_006059439.1
    Organism Bubalus bubalis(water buffalo)
    Definition Bubalus bubalis collagen, type II, alpha 1 (COL2A1), transcript variant X2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_006059439.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    3481
    3541
    3601
    3661
    3721
    3781
    3841
    3901
    3961
    4021
    4081
    4141
    4201
    ATGATCCGCC TCGGGGCTCC CCAGACGCTG GTGCTGCTGA CGCTGCTCGT CGCCGCTGTC 
    CTTCGGTGTC ACGGCCAGGA TGTCCGGCAA CCAGGACCAA AGGGACAGAA AGGAGAACCT
    GGAGATATCA AGGACATCGT AGGACCCAAG GGACCTCCTG GACCTCAGGG ACCCGCAGGT
    GAACAAGGAC CCAGAGGTGA TCGTGGTGAC AAAGGTGAAA AAGGTGCTCC TGGACCTCGT
    GGCAGAGATG GAGAGCCTGG GACCCCTGGA AACCCTGGCC CCCCTGGTCC TCCCGGCCCC
    CCCGGCCCCC CTGGCCTTGG TGGAAACTTT GCTGCCCAGA TGGCTGGTGG ATTTGATGAG
    AAGGCTGGTG GCGCCCAGAT GGGAGTAATG CAGGGACCAA TGGGCCCCAT GGGACCTCGG
    GGACCCCCAG GCCCTGCTGG TGCTCCCGGA CCTCAAGGAT TTCAAGGCAA CCCTGGTGAA
    CCTGGGGAAC CCGGTGTTTC TGGTCCCATG GGGCCCCGTG GTCCTCCTGG CCCCCCTGGG
    AAACCTGGTG ATGATGGTGA AGCTGGAAAG CCTGGAAAAT CTGGCGAGAG AGGCCCTCCT
    GGCCCTCAGG GTGCTCGTGG TTTCCCAGGA ACCCCAGGCC TTCCTGGTGT CAAAGGTCAC
    AGAGGTTACC CAGGTCTAGA TGGTGCTAAG GGAGAAGCTG GTGCTCCAGG TGTGAAGGGT
    GAGAGTGGTT CCCCAGGTGA GAACGGTTCT CCAGGCCCAA TGGGTCCCCG CGGCTTGCCT
    GGTGAGAGAG GACGGACTGG CCCTGCCGGC GCTGCAGGCG CTCGAGGCAA TGACGGTCAA
    CCAGGCCCTG CAGGGCCTCC GGGTCCTGTG GGTCCTGCTG GCGGTCCTGG CTTTCCTGGT
    GCTCCTGGTG CCAAGGGTGA AGCTGGCCCC ACCGGTGCTC GAGGTCCCGA AGGCGCCCAG
    GGTCCTCGCG GTGAACCGGG TACTCCTGGG TCCCCTGGGC CAGCTGGTGC TGCTGGCAAC
    CCTGGAACTG ATGGAATCCC TGGAGCCAAG GGATCTGCTG GTGCCCCTGG CATTGCTGGT
    GCTCCCGGCT TCCCTGGACC CCGTGGTCCA CCCGGCCCTC AAGGTGCAAC TGGTCCTCTG
    GGCCCGAAAG GTCAAACGGG TGAGCCTGGT ATTGCTGGCT TCAAAGGCGA ACAAGGCCCC
    AAGGGAGAAC CGGGCCCTGC TGGTCCCCAA GGAGCCCCTG GTCCTGCTGG TGAAGAAGGG
    AAAAGAGGTG CCCGTGGAGA ACCTGGTGGT GCTGGGCCCG CCGGTCCCCC TGGAGAAAGA
    GGTGCTCCTG GAAACCGTGG TTTCCCAGGT CAGGATGGTC TGGCAGGTCC CAAGGGAGCC
    CCTGGAGAGC GAGGACCCAG TGGCCTTGCT GGTCCCAAGG GAGCCAACGG TGACCCTGGC
    CGTCCTGGAG AGCCTGGCCT TCCTGGAGCC CGGGGTCTCA CTGGTCGCCC TGGTGATGCT
    GGTCCTCAAG GCAAAGTTGG TCCTTCCGGA GCCCCTGGTG AAGACGGTCG CCCTGGACCC
    CCAGGTCCTC AGGGGGCTCG TGGGCAGCCT GGTGTCATGG GTTTCCCTGG CCCCAAAGGT
    GCCAATGGTG AGCCTGGCAA AGCTGGTGAG AAAGGACTGC CTGGTGCTCC TGGTCTGAGA
    GGTCTTCCTG GCAAAGATGG TGAGACAGGT GCTGCAGGCC CCCCTGGACC CGCTGGACCA
    GCTGGTGAAC GAGGCGAGCA GGGTGCTCCT GGGCCATCTG GGTTCCAGGG ACTTCCTGGC
    CCTCCCGGCC CCCCAGGAGA AGGTGGAAAA CCAGGTGACC AGGGTGTTCC TGGTGAAGCT
    GGAGCTCCTG GCCTCGTGGG TCCCAGGGGT GAACGAGGTT TCCCAGGAGA ACGTGGCTCC
    CCTGGCTCCC AGGGCCTCCA GGGGGCCCGC GGCCTCCCCG GCACTCCTGG CACTGATGGT
    CCCAAAGGCG CAGCTGGCCC AGCTGGCCCC CCTGGGGCTC AGGGCCCTCC AGGTCTGCAG
    GGCATGCCCG GTGAGAGGGG AGCAGCTGGT ATCGCCGGAC CCAAGGGAGA CAGGGGTGAT
    GTTGGTGAGA AAGGCCCCGA GGGCGCCCCC GGGAAGGACG GTGGACGAGG TCTGACTGGC
    CCCATTGGCC CCCCTGGCCC AGCCGGTGCC AACGGTGAGA AGGGAGAAGT TGGACCCCCT
    GGTCCTGCTG GAACTGCTGG TGCTCGAGGT GCCCCGGGTG AACGTGGAGA GACAGGCCCC
    CCTGGACCCG CTGGATTCGC CGGTCCCCCT GGTGCTGATG GCCAGCCTGG TGCCAAAGGT
    GAACAAGGAG AAGCCGGCCA GAAAGGTGAC GCTGGTGCCC CCGGTCCTCA GGGCCCCTCT
    GGAGCTCCTG GGCCTCAGGG TCCTACTGGT GTGACTGGTC CTAAAGGAGC CCGAGGTGCT
    CAAGGCCCCC CGGGAGCCAC CGGATTCCCC GGAGCAGCTG GCCGCGTCGG ACCCCCAGGC
    TCCAATGGCA ACCCTGGACC CCCCGGTCCT CCTGGTCCTT CTGGAAAAGA TGGTCCTAAA
    GGTGCTCGAG GAGACAGTGG CCCCCCTGGC CGAGCTGGTG ACCCTGGCCT CCAAGGTCCT
    GCTGGACCCC CTGGCGAGAA GGGAGAGCCT GGAGATGATG GTCCTTCTGG TCCCGACGGT
    CCCCCAGGTC CTCAGGGTCT GGCTGGTCAG AGGGGCATCG TTGGTCTGCC TGGACAGCGT
    GGTGAGCGAG GATTCCCCGG CCTCCCCGGC CCCTCGGGTG AGCCTGGCAA GCAGGGAGCC
    CCTGGAGCAT CTGGAGACCG AGGTCCCCCT GGCCCTGTGG GTCCTCCTGG CCTGACTGGT
    CCTGCTGGCG AGCCTGGACG TGAGGGAAGC CCCGGTGCTG ACGGCCCCCC TGGCAGAGAT
    GGCGCGGCTG GAGTCAAGGG TGACCGTGGA GAGACTGGTG CCGTGGGTGC CCCTGGAGCC
    CCCGGGCCCC CTGGCTCTCC TGGCCCCGCC GGCCCAGTTG GCAAGCAGGG AGACCGAGGA
    GAGGCTGGCG CACAAGGTCC CATGGGACCT GCAGGACCTG CTGGAGCCCG GGGAATGCCA
    GGCCCTCAAG GCCCCCGAGG TGACAAAGGA GAAACTGGAG AGGCTGGCGA GAGGGGACTG
    AAGGGACACC GTGGCTTCAC TGGTCTGCAG GGTCTGCCCG GCCCCCCTGG TCCTTCCGGA
    GACCAGGGTG CTTCCGGTCC TGCAGGTCCT TCTGGCCCCA GAGGTCCTCC TGGCCCCGTC
    GGTCCCTCTG GCAAAGATGG TGCTAACGGA ATCCCTGGCC CCATTGGACC TCCTGGGCCC
    CGTGGACGTT CCGGCGAGAC TGGCCCTGCT GGTCCTCCTG GAAACCCTGG ACCCCCTGGC
    CCTCCTGGCC CCCCTGGCCC TGGCATCGAC ATGTCTGCCT TTGCTGGCCT TGGCCAGAGA
    GAGAAGGGCC CTGATCCTCT GCAGTACATG CGGGCCGACG AGGCAGCCGG CAACCTGAGA
    CAGCATGATG CCGAGGTGGA CGCCACACTC AAGTCCCTCA ACAACCAGAT CGAGAGCCTC
    CGCAGCCCCG AGGGCTCCCG CAAGAACCCA GCTCGCACCT GCCGAGACCT GAAACTCTGC
    CACCCTGAGT GGAAGAGCGG AGACTACTGG ATCGACCCCA ACCAGGGCTG CACCCTGGAT
    GCCATGAAGG TTTTCTGCAA CATGGAGACT GGCGAGACCT GCGTCTACCC CAACCCGGCC
    AGCGTCCCCA AGAAGAACTG GTGGAGCAGC AAGAGCAAGG ACAAGAAACA CATCTGGTTT
    GGAGAAACCA TCAACGGTGG CTTCCACTTC AGCTATGGAG ATGACAACCT GGCTCCCAAC
    ACCGCCAACG TCCAGATGAC CTTCCTGCGC CTGCTGTCCA CCGAGGGCTC TCAGAACATC
    ACCTACCACT GCAAGAACAG CATTGCCTAC CTGGACGAAG CTGCTGGCAA CCTCAAGAAG
    GCTCTGCTCA TCCAGGGCTC CAACGATGTG GAGATCCGGG CTGAGGGCAA CAGCAGGTTC
    ACATACACCG TTCTGAAGGA TGGCTGCACG AAACACACCG GTAAGTGGGG CAAGACTATG
    ATCGAGTACC GGTCACAGAA GACCTCCCGT CTGCCCATCA TTGACATTGC ACCCATGGAC
    ATAGGAGGGC CCGAGCAGGA ATTCGGTGTG GACATAGGGC CTGTCTGCTT CTTGTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OBu16038
    Clone ID Related Accession (Same CDS sequence) XM_006059440.1
    Accession Version XM_006059440.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 4191bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2014-03-11
    Organism Bubalus bubalis(water buffalo)
    Product collagen alpha-1(II) chain isoform X3
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_005784912.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bubalus bubalis Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 5.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    3481
    3541
    3601
    3661
    3721
    3781
    3841
    3901
    3961
    4021
    4081
    4141
    ATGGAGACCC AGCTTGAATG GCAACCAGGA CCAAAGGGAC AGAAAGGAGA ACCTGGAGAT 
    ATCAAGGACA TCGTAGGACC CAAGGGACCT CCTGGACCTC AGGGACCCGC AGGTGAACAA
    GGACCCAGAG GTGATCGTGG TGACAAAGGT GAAAAAGGTG CTCCTGGACC TCGTGGCAGA
    GATGGAGAGC CTGGGACCCC TGGAAACCCT GGCCCCCCTG GTCCTCCCGG CCCCCCCGGC
    CCCCCTGGCC TTGGTGGAAA CTTTGCTGCC CAGATGGCTG GTGGATTTGA TGAGAAGGCT
    GGTGGCGCCC AGATGGGAGT AATGCAGGGA CCAATGGGCC CCATGGGACC TCGGGGACCC
    CCAGGCCCTG CTGGTGCTCC CGGACCTCAA GGATTTCAAG GCAACCCTGG TGAACCTGGG
    GAACCCGGTG TTTCTGGTCC CATGGGGCCC CGTGGTCCTC CTGGCCCCCC TGGGAAACCT
    GGTGATGATG GTGAAGCTGG AAAGCCTGGA AAATCTGGCG AGAGAGGCCC TCCTGGCCCT
    CAGGGTGCTC GTGGTTTCCC AGGAACCCCA GGCCTTCCTG GTGTCAAAGG TCACAGAGGT
    TACCCAGGTC TAGATGGTGC TAAGGGAGAA GCTGGTGCTC CAGGTGTGAA GGGTGAGAGT
    GGTTCCCCAG GTGAGAACGG TTCTCCAGGC CCAATGGGTC CCCGCGGCTT GCCTGGTGAG
    AGAGGACGGA CTGGCCCTGC CGGCGCTGCA GGCGCTCGAG GCAATGACGG TCAACCAGGC
    CCTGCAGGGC CTCCGGGTCC TGTGGGTCCT GCTGGCGGTC CTGGCTTTCC TGGTGCTCCT
    GGTGCCAAGG GTGAAGCTGG CCCCACCGGT GCTCGAGGTC CCGAAGGCGC CCAGGGTCCT
    CGCGGTGAAC CGGGTACTCC TGGGTCCCCT GGGCCAGCTG GTGCTGCTGG CAACCCTGGA
    ACTGATGGAA TCCCTGGAGC CAAGGGATCT GCTGGTGCCC CTGGCATTGC TGGTGCTCCC
    GGCTTCCCTG GACCCCGTGG TCCACCCGGC CCTCAAGGTG CAACTGGTCC TCTGGGCCCG
    AAAGGTCAAA CGGGTGAGCC TGGTATTGCT GGCTTCAAAG GCGAACAAGG CCCCAAGGGA
    GAACCGGGCC CTGCTGGTCC CCAAGGAGCC CCTGGTCCTG CTGGTGAAGA AGGGAAAAGA
    GGTGCCCGTG GAGAACCTGG TGGTGCTGGG CCCGCCGGTC CCCCTGGAGA AAGAGGTGCT
    CCTGGAAACC GTGGTTTCCC AGGTCAGGAT GGTCTGGCAG GTCCCAAGGG AGCCCCTGGA
    GAGCGAGGAC CCAGTGGCCT TGCTGGTCCC AAGGGAGCCA ACGGTGACCC TGGCCGTCCT
    GGAGAGCCTG GCCTTCCTGG AGCCCGGGGT CTCACTGGTC GCCCTGGTGA TGCTGGTCCT
    CAAGGCAAAG TTGGTCCTTC CGGAGCCCCT GGTGAAGACG GTCGCCCTGG ACCCCCAGGT
    CCTCAGGGGG CTCGTGGGCA GCCTGGTGTC ATGGGTTTCC CTGGCCCCAA AGGTGCCAAT
    GGTGAGCCTG GCAAAGCTGG TGAGAAAGGA CTGCCTGGTG CTCCTGGTCT GAGAGGTCTT
    CCTGGCAAAG ATGGTGAGAC AGGTGCTGCA GGCCCCCCTG GACCCGCTGG ACCAGCTGGT
    GAACGAGGCG AGCAGGGTGC TCCTGGGCCA TCTGGGTTCC AGGGACTTCC TGGCCCTCCC
    GGCCCCCCAG GAGAAGGTGG AAAACCAGGT GACCAGGGTG TTCCTGGTGA AGCTGGAGCT
    CCTGGCCTCG TGGGTCCCAG GGGTGAACGA GGTTTCCCAG GAGAACGTGG CTCCCCTGGC
    TCCCAGGGCC TCCAGGGGGC CCGCGGCCTC CCCGGCACTC CTGGCACTGA TGGTCCCAAA
    GGCGCAGCTG GCCCAGCTGG CCCCCCTGGG GCTCAGGGCC CTCCAGGTCT GCAGGGCATG
    CCCGGTGAGA GGGGAGCAGC TGGTATCGCC GGACCCAAGG GAGACAGGGG TGATGTTGGT
    GAGAAAGGCC CCGAGGGCGC CCCCGGGAAG GACGGTGGAC GAGGTCTGAC TGGCCCCATT
    GGCCCCCCTG GCCCAGCCGG TGCCAACGGT GAGAAGGGAG AAGTTGGACC CCCTGGTCCT
    GCTGGAACTG CTGGTGCTCG AGGTGCCCCG GGTGAACGTG GAGAGACAGG CCCCCCTGGA
    CCCGCTGGAT TCGCCGGTCC CCCTGGTGCT GATGGCCAGC CTGGTGCCAA AGGTGAACAA
    GGAGAAGCCG GCCAGAAAGG TGACGCTGGT GCCCCCGGTC CTCAGGGCCC CTCTGGAGCT
    CCTGGGCCTC AGGGTCCTAC TGGTGTGACT GGTCCTAAAG GAGCCCGAGG TGCTCAAGGC
    CCCCCGGGAG CCACCGGATT CCCCGGAGCA GCTGGCCGCG TCGGACCCCC AGGCTCCAAT
    GGCAACCCTG GACCCCCCGG TCCTCCTGGT CCTTCTGGAA AAGATGGTCC TAAAGGTGCT
    CGAGGAGACA GTGGCCCCCC TGGCCGAGCT GGTGACCCTG GCCTCCAAGG TCCTGCTGGA
    CCCCCTGGCG AGAAGGGAGA GCCTGGAGAT GATGGTCCTT CTGGTCCCGA CGGTCCCCCA
    GGTCCTCAGG GTCTGGCTGG TCAGAGGGGC ATCGTTGGTC TGCCTGGACA GCGTGGTGAG
    CGAGGATTCC CCGGCCTCCC CGGCCCCTCG GGTGAGCCTG GCAAGCAGGG AGCCCCTGGA
    GCATCTGGAG ACCGAGGTCC CCCTGGCCCT GTGGGTCCTC CTGGCCTGAC TGGTCCTGCT
    GGCGAGCCTG GACGTGAGGG AAGCCCCGGT GCTGACGGCC CCCCTGGCAG AGATGGCGCG
    GCTGGAGTCA AGGGTGACCG TGGAGAGACT GGTGCCGTGG GTGCCCCTGG AGCCCCCGGG
    CCCCCTGGCT CTCCTGGCCC CGCCGGCCCA GTTGGCAAGC AGGGAGACCG AGGAGAGGCT
    GGCGCACAAG GTCCCATGGG ACCTGCAGGA CCTGCTGGAG CCCGGGGAAT GCCAGGCCCT
    CAAGGCCCCC GAGGTGACAA AGGAGAAACT GGAGAGGCTG GCGAGAGGGG ACTGAAGGGA
    CACCGTGGCT TCACTGGTCT GCAGGGTCTG CCCGGCCCCC CTGGTCCTTC CGGAGACCAG
    GGTGCTTCCG GTCCTGCAGG TCCTTCTGGC CCCAGAGGTC CTCCTGGCCC CGTCGGTCCC
    TCTGGCAAAG ATGGTGCTAA CGGAATCCCT GGCCCCATTG GACCTCCTGG GCCCCGTGGA
    CGTTCCGGCG AGACTGGCCC TGCTGGTCCT CCTGGAAACC CTGGACCCCC TGGCCCTCCT
    GGCCCCCCTG GCCCTGGCAT CGACATGTCT GCCTTTGCTG GCCTTGGCCA GAGAGAGAAG
    GGCCCTGATC CTCTGCAGTA CATGCGGGCC GACGAGGCAG CCGGCAACCT GAGACAGCAT
    GATGCCGAGG TGGACGCCAC ACTCAAGTCC CTCAACAACC AGATCGAGAG CCTCCGCAGC
    CCCGAGGGCT CCCGCAAGAA CCCAGCTCGC ACCTGCCGAG ACCTGAAACT CTGCCACCCT
    GAGTGGAAGA GCGGAGACTA CTGGATCGAC CCCAACCAGG GCTGCACCCT GGATGCCATG
    AAGGTTTTCT GCAACATGGA GACTGGCGAG ACCTGCGTCT ACCCCAACCC GGCCAGCGTC
    CCCAAGAAGA ACTGGTGGAG CAGCAAGAGC AAGGACAAGA AACACATCTG GTTTGGAGAA
    ACCATCAACG GTGGCTTCCA CTTCAGCTAT GGAGATGACA ACCTGGCTCC CAACACCGCC
    AACGTCCAGA TGACCTTCCT GCGCCTGCTG TCCACCGAGG GCTCTCAGAA CATCACCTAC
    CACTGCAAGA ACAGCATTGC CTACCTGGAC GAAGCTGCTG GCAACCTCAA GAAGGCTCTG
    CTCATCCAGG GCTCCAACGA TGTGGAGATC CGGGCTGAGG GCAACAGCAG GTTCACATAC
    ACCGTTCTGA AGGATGGCTG CACGAAACAC ACCGGTAAGT GGGGCAAGAC TATGATCGAG
    TACCGGTCAC AGAAGACCTC CCGTCTGCCC ATCATTGACA TTGCACCCAT GGACATAGGA
    GGGCCCGAGC AGGAATTCGG TGTGGACATA GGGCCTGTCT GCTTCTTGTA A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006059502.1
    CDS179..4369
    Translation

    Target ORF information:

    RefSeq Version XM_006059440.1
    Organism Bubalus bubalis(water buffalo)
    Definition Bubalus bubalis collagen, type II, alpha 1 (COL2A1), transcript variant X3, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_006059440.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    3481
    3541
    3601
    3661
    3721
    3781
    3841
    3901
    3961
    4021
    4081
    4141
    ATGGAGACCC AGCTTGAATG GCAACCAGGA CCAAAGGGAC AGAAAGGAGA ACCTGGAGAT 
    ATCAAGGACA TCGTAGGACC CAAGGGACCT CCTGGACCTC AGGGACCCGC AGGTGAACAA
    GGACCCAGAG GTGATCGTGG TGACAAAGGT GAAAAAGGTG CTCCTGGACC TCGTGGCAGA
    GATGGAGAGC CTGGGACCCC TGGAAACCCT GGCCCCCCTG GTCCTCCCGG CCCCCCCGGC
    CCCCCTGGCC TTGGTGGAAA CTTTGCTGCC CAGATGGCTG GTGGATTTGA TGAGAAGGCT
    GGTGGCGCCC AGATGGGAGT AATGCAGGGA CCAATGGGCC CCATGGGACC TCGGGGACCC
    CCAGGCCCTG CTGGTGCTCC CGGACCTCAA GGATTTCAAG GCAACCCTGG TGAACCTGGG
    GAACCCGGTG TTTCTGGTCC CATGGGGCCC CGTGGTCCTC CTGGCCCCCC TGGGAAACCT
    GGTGATGATG GTGAAGCTGG AAAGCCTGGA AAATCTGGCG AGAGAGGCCC TCCTGGCCCT
    CAGGGTGCTC GTGGTTTCCC AGGAACCCCA GGCCTTCCTG GTGTCAAAGG TCACAGAGGT
    TACCCAGGTC TAGATGGTGC TAAGGGAGAA GCTGGTGCTC CAGGTGTGAA GGGTGAGAGT
    GGTTCCCCAG GTGAGAACGG TTCTCCAGGC CCAATGGGTC CCCGCGGCTT GCCTGGTGAG
    AGAGGACGGA CTGGCCCTGC CGGCGCTGCA GGCGCTCGAG GCAATGACGG TCAACCAGGC
    CCTGCAGGGC CTCCGGGTCC TGTGGGTCCT GCTGGCGGTC CTGGCTTTCC TGGTGCTCCT
    GGTGCCAAGG GTGAAGCTGG CCCCACCGGT GCTCGAGGTC CCGAAGGCGC CCAGGGTCCT
    CGCGGTGAAC CGGGTACTCC TGGGTCCCCT GGGCCAGCTG GTGCTGCTGG CAACCCTGGA
    ACTGATGGAA TCCCTGGAGC CAAGGGATCT GCTGGTGCCC CTGGCATTGC TGGTGCTCCC
    GGCTTCCCTG GACCCCGTGG TCCACCCGGC CCTCAAGGTG CAACTGGTCC TCTGGGCCCG
    AAAGGTCAAA CGGGTGAGCC TGGTATTGCT GGCTTCAAAG GCGAACAAGG CCCCAAGGGA
    GAACCGGGCC CTGCTGGTCC CCAAGGAGCC CCTGGTCCTG CTGGTGAAGA AGGGAAAAGA
    GGTGCCCGTG GAGAACCTGG TGGTGCTGGG CCCGCCGGTC CCCCTGGAGA AAGAGGTGCT
    CCTGGAAACC GTGGTTTCCC AGGTCAGGAT GGTCTGGCAG GTCCCAAGGG AGCCCCTGGA
    GAGCGAGGAC CCAGTGGCCT TGCTGGTCCC AAGGGAGCCA ACGGTGACCC TGGCCGTCCT
    GGAGAGCCTG GCCTTCCTGG AGCCCGGGGT CTCACTGGTC GCCCTGGTGA TGCTGGTCCT
    CAAGGCAAAG TTGGTCCTTC CGGAGCCCCT GGTGAAGACG GTCGCCCTGG ACCCCCAGGT
    CCTCAGGGGG CTCGTGGGCA GCCTGGTGTC ATGGGTTTCC CTGGCCCCAA AGGTGCCAAT
    GGTGAGCCTG GCAAAGCTGG TGAGAAAGGA CTGCCTGGTG CTCCTGGTCT GAGAGGTCTT
    CCTGGCAAAG ATGGTGAGAC AGGTGCTGCA GGCCCCCCTG GACCCGCTGG ACCAGCTGGT
    GAACGAGGCG AGCAGGGTGC TCCTGGGCCA TCTGGGTTCC AGGGACTTCC TGGCCCTCCC
    GGCCCCCCAG GAGAAGGTGG AAAACCAGGT GACCAGGGTG TTCCTGGTGA AGCTGGAGCT
    CCTGGCCTCG TGGGTCCCAG GGGTGAACGA GGTTTCCCAG GAGAACGTGG CTCCCCTGGC
    TCCCAGGGCC TCCAGGGGGC CCGCGGCCTC CCCGGCACTC CTGGCACTGA TGGTCCCAAA
    GGCGCAGCTG GCCCAGCTGG CCCCCCTGGG GCTCAGGGCC CTCCAGGTCT GCAGGGCATG
    CCCGGTGAGA GGGGAGCAGC TGGTATCGCC GGACCCAAGG GAGACAGGGG TGATGTTGGT
    GAGAAAGGCC CCGAGGGCGC CCCCGGGAAG GACGGTGGAC GAGGTCTGAC TGGCCCCATT
    GGCCCCCCTG GCCCAGCCGG TGCCAACGGT GAGAAGGGAG AAGTTGGACC CCCTGGTCCT
    GCTGGAACTG CTGGTGCTCG AGGTGCCCCG GGTGAACGTG GAGAGACAGG CCCCCCTGGA
    CCCGCTGGAT TCGCCGGTCC CCCTGGTGCT GATGGCCAGC CTGGTGCCAA AGGTGAACAA
    GGAGAAGCCG GCCAGAAAGG TGACGCTGGT GCCCCCGGTC CTCAGGGCCC CTCTGGAGCT
    CCTGGGCCTC AGGGTCCTAC TGGTGTGACT GGTCCTAAAG GAGCCCGAGG TGCTCAAGGC
    CCCCCGGGAG CCACCGGATT CCCCGGAGCA GCTGGCCGCG TCGGACCCCC AGGCTCCAAT
    GGCAACCCTG GACCCCCCGG TCCTCCTGGT CCTTCTGGAA AAGATGGTCC TAAAGGTGCT
    CGAGGAGACA GTGGCCCCCC TGGCCGAGCT GGTGACCCTG GCCTCCAAGG TCCTGCTGGA
    CCCCCTGGCG AGAAGGGAGA GCCTGGAGAT GATGGTCCTT CTGGTCCCGA CGGTCCCCCA
    GGTCCTCAGG GTCTGGCTGG TCAGAGGGGC ATCGTTGGTC TGCCTGGACA GCGTGGTGAG
    CGAGGATTCC CCGGCCTCCC CGGCCCCTCG GGTGAGCCTG GCAAGCAGGG AGCCCCTGGA
    GCATCTGGAG ACCGAGGTCC CCCTGGCCCT GTGGGTCCTC CTGGCCTGAC TGGTCCTGCT
    GGCGAGCCTG GACGTGAGGG AAGCCCCGGT GCTGACGGCC CCCCTGGCAG AGATGGCGCG
    GCTGGAGTCA AGGGTGACCG TGGAGAGACT GGTGCCGTGG GTGCCCCTGG AGCCCCCGGG
    CCCCCTGGCT CTCCTGGCCC CGCCGGCCCA GTTGGCAAGC AGGGAGACCG AGGAGAGGCT
    GGCGCACAAG GTCCCATGGG ACCTGCAGGA CCTGCTGGAG CCCGGGGAAT GCCAGGCCCT
    CAAGGCCCCC GAGGTGACAA AGGAGAAACT GGAGAGGCTG GCGAGAGGGG ACTGAAGGGA
    CACCGTGGCT TCACTGGTCT GCAGGGTCTG CCCGGCCCCC CTGGTCCTTC CGGAGACCAG
    GGTGCTTCCG GTCCTGCAGG TCCTTCTGGC CCCAGAGGTC CTCCTGGCCC CGTCGGTCCC
    TCTGGCAAAG ATGGTGCTAA CGGAATCCCT GGCCCCATTG GACCTCCTGG GCCCCGTGGA
    CGTTCCGGCG AGACTGGCCC TGCTGGTCCT CCTGGAAACC CTGGACCCCC TGGCCCTCCT
    GGCCCCCCTG GCCCTGGCAT CGACATGTCT GCCTTTGCTG GCCTTGGCCA GAGAGAGAAG
    GGCCCTGATC CTCTGCAGTA CATGCGGGCC GACGAGGCAG CCGGCAACCT GAGACAGCAT
    GATGCCGAGG TGGACGCCAC ACTCAAGTCC CTCAACAACC AGATCGAGAG CCTCCGCAGC
    CCCGAGGGCT CCCGCAAGAA CCCAGCTCGC ACCTGCCGAG ACCTGAAACT CTGCCACCCT
    GAGTGGAAGA GCGGAGACTA CTGGATCGAC CCCAACCAGG GCTGCACCCT GGATGCCATG
    AAGGTTTTCT GCAACATGGA GACTGGCGAG ACCTGCGTCT ACCCCAACCC GGCCAGCGTC
    CCCAAGAAGA ACTGGTGGAG CAGCAAGAGC AAGGACAAGA AACACATCTG GTTTGGAGAA
    ACCATCAACG GTGGCTTCCA CTTCAGCTAT GGAGATGACA ACCTGGCTCC CAACACCGCC
    AACGTCCAGA TGACCTTCCT GCGCCTGCTG TCCACCGAGG GCTCTCAGAA CATCACCTAC
    CACTGCAAGA ACAGCATTGC CTACCTGGAC GAAGCTGCTG GCAACCTCAA GAAGGCTCTG
    CTCATCCAGG GCTCCAACGA TGTGGAGATC CGGGCTGAGG GCAACAGCAG GTTCACATAC
    ACCGTTCTGA AGGATGGCTG CACGAAACAC ACCGGTAAGT GGGGCAAGAC TATGATCGAG
    TACCGGTCAC AGAAGACCTC CCGTCTGCCC ATCATTGACA TTGCACCCAT GGACATAGGA
    GGGCCCGAGC AGGAATTCGG TGTGGACATA GGGCCTGTCT GCTTCTTGTA A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.