Gene Symbol | LOC789175 |
Entrez Gene ID | 789175 |
Full Name | beta-defensin 103B-like |
Synonyms | DEFB103,DEFB103A,DEFB103B,DEFB300 |
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
ORF » Species Summary » Bos taurus » LOC789175 cDNA ORF clone
Gene Symbol | LOC789175 |
Entrez Gene ID | 789175 |
Full Name | beta-defensin 103B-like |
Synonyms | DEFB103,DEFB103A,DEFB103B,DEFB300 |
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
mRNA | Protein | Name |
---|---|---|
XM_010820219.2 | XP_010818521.1 | beta-defensin 103B isoform X1 |
NM_001114862.1 | NP_001108334.1 | beta-defensin 103B precursor |
XM_005225932.3 | XP_005225989.1 | beta-defensin 103B isoform X1 |
XM_010820219.3 | XP_010818521.1 | beta-defensin 103B isoform X1 |
XM_005225932.2 | XP_005225989.1 | beta-defensin 103B isoform X1 |
Tissue- and age-dependent expression of the bovine DEFB103 gene and protein.
Mirabzadeh-Ardakani A, Solie J, Gonzalez-Cano P, Schmutz SM, Griebel PJ
Cell and tissue research363(2)479-90(2016 Feb)
Identification of a new non-coding exon and haplotype variability in the cattle DEFB103 gene.
Mirabzadeh-Ardakani A, Griebel P, Schmutz SM
Gene551(2)183-8(2014 Nov)
The variant red coat colour phenotype of Holstein cattle maps to BTA27.
Dreger DL, Schmutz SM
Animal genetics41(1)109-12(2010 Feb)
A whole-genome assembly of the domestic cow, Bos taurus.
Zimin AV, Delcher AL, Florea L, Kelley DR, Schatz MC, Puiu D, Hanrahan F, Pertea G, Van Tassell CP, Sonstegard TS, Mar?ais G, Roberts M, Subramanian P, Yorke JA, Salzberg SL
Genome biology10(4)R42(2009)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Expression of the bovine DEFB103 gene was surveyed in 27 tissues and transcript was most abundant in tissues with stratified squamous epithelium.
Title: Tissue- and age-dependent expression of the bovine DEFB103 gene and protein.
The following LOC789175 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC789175 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OBa33871 | |
Clone ID Related Accession (Same CDS sequence) | XM_010820219.2 , NM_001114862.1 , XM_005225932.3 , XM_010820219.3 , XM_005225932.2 | |
Accession Version | NM_001114862.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 204bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-09-15 | |
Organism | Bos taurus(cattle) | |
Product | beta-defensin 103B precursor | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AJ568025.1. ##Evidence-Data-START## Transcript exon combination :: EU715239.2 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN03145412, SAMN03145413 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGAGGCTCT ACTACCTTCT CTTTGCGTTG CTCTTCTTGT TCTTGCTGCC TGTTCCAGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001108334.1 |
CDS | 26..229 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGAGGCTCT ACTACCTTCT CTTTGCGTTG CTCTTCTTGT TCTTGCTGCC TGTTCCAGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa33871 | |
Clone ID Related Accession (Same CDS sequence) | XM_010820219.2 , NM_001114862.1 , XM_005225932.3 , XM_010820219.3 , XM_005225932.2 | |
Accession Version | XM_010820219.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 204bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-01-25 | |
Organism | Bos taurus(cattle) | |
Product | beta-defensin 103B isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104593.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jan 26, 2016 this sequence version replaced XM_010820219.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGGCTCT ACTACCTTCT CTTTGCGTTG CTCTTCTTGT TCTTGCTGCC TGTTCCAGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_010818521.1 |
CDS | 199..402 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGAGGCTCT ACTACCTTCT CTTTGCGTTG CTCTTCTTGT TCTTGCTGCC TGTTCCAGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa33871 | |
Clone ID Related Accession (Same CDS sequence) | XM_010820219.2 , NM_001114862.1 , XM_005225932.3 , XM_010820219.3 , XM_005225932.2 | |
Accession Version | XM_005225932.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 204bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | beta-defensin 103B isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037354.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On May 7, 2018 this sequence version replaced XM_005225932.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGGCTCT ACTACCTTCT CTTTGCGTTG CTCTTCTTGT TCTTGCTGCC TGTTCCAGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005225989.1 |
CDS | 241..444 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGAGGCTCT ACTACCTTCT CTTTGCGTTG CTCTTCTTGT TCTTGCTGCC TGTTCCAGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa33871 | |
Clone ID Related Accession (Same CDS sequence) | XM_010820219.2 , NM_001114862.1 , XM_005225932.3 , XM_010820219.3 , XM_005225932.2 | |
Accession Version | XM_010820219.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 204bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | beta-defensin 103B isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037354.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On May 7, 2018 this sequence version replaced XM_010820219.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGGCTCT ACTACCTTCT CTTTGCGTTG CTCTTCTTGT TCTTGCTGCC TGTTCCAGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_010818521.1 |
CDS | 129..332 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGAGGCTCT ACTACCTTCT CTTTGCGTTG CTCTTCTTGT TCTTGCTGCC TGTTCCAGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa33871 | |
Clone ID Related Accession (Same CDS sequence) | XM_010820219.2 , NM_001114862.1 , XM_005225932.3 , XM_010820219.3 , XM_005225932.2 | |
Accession Version | XM_005225932.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 204bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-01-25 | |
Organism | Bos taurus(cattle) | |
Product | beta-defensin 103B isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104593.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 30, 2014 this sequence version replaced XM_005225932.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGGCTCT ACTACCTTCT CTTTGCGTTG CTCTTCTTGT TCTTGCTGCC TGTTCCAGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005225989.1 |
CDS | 241..444 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGAGGCTCT ACTACCTTCT CTTTGCGTTG CTCTTCTTGT TCTTGCTGCC TGTTCCAGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Tissue- and age-dependent expression of the bovine DEFB103 gene and protein. |
Identification of a new non-coding exon and haplotype variability in the cattle DEFB103 gene. |
The variant red coat colour phenotype of Holstein cattle maps to BTA27. |
A whole-genome assembly of the domestic cow, Bos taurus. |