Gene Symbol | DEFB119 |
Entrez Gene ID | 767957 |
Full Name | defensin beta 119 |
Synonyms | BBD119,DEFB120 |
Gene Type | protein-coding |
Organism | Bos taurus(Cattle) |
ORF » Species Summary » Bos taurus » DEFB119 cDNA ORF clone
Gene Symbol | DEFB119 |
Entrez Gene ID | 767957 |
Full Name | defensin beta 119 |
Synonyms | BBD119,DEFB120 |
Gene Type | protein-coding |
Organism | Bos taurus(Cattle) |
mRNA | Protein | Name |
---|---|---|
NM_001101661.2 | NP_001095131.1 | beta-defensin 119 precursor |
XM_025000841.1 | XP_024856609.1 | beta-defensin 119 isoform X1 |
NM_001101661.3 | NP_001095131.1 | beta-defensin 119 isoform 1 precursor |
NM_001102359.2 | NP_001095829.1 | beta-defensin 119 isoform 2 precursor |
XM_005214877.3 | XP_005214934.1 | beta-defensin 119 isoform X1 |
A whole-genome assembly of the domestic cow, Bos taurus.
Zimin AV, Delcher AL, Florea L, Kelley DR, Schatz MC, Puiu D, Hanrahan F, Pertea G, Van Tassell CP, Sonstegard TS, Mar?ais G, Roberts M, Subramanian P, Yorke JA, Salzberg SL
Genome biology10(4)R42(2009)
Evolution, expression and effectiveness in a cluster of novel bovine beta-defensins.
Cormican P, Meade KG, Cahalane S, Narciandi F, Chapwanya A, Lloyd AT, O'Farrelly C
Immunogenetics60(3-4)147-56(2008 Apr)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following DEFB119 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the DEFB119 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OBa02071 | |
Clone ID Related Accession (Same CDS sequence) | NM_001102359.2 , XM_005214877.3 | |
Accession Version | NM_001102359.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 243bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-19 | |
Organism | Bos taurus(cattle) | |
Product | beta-defensin 119 isoform 2 precursor | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from NKLS02000013.1. On or before Jun 2, 2017 this sequence version replaced XM_005214877.3, NM_001102359.1. Transcript Variant: This variant (2) differs in the coding region and the 3' UTR compared to variant 1. The encoded isoform (2) is shorter and has a distinct C-terminus compared to isoform 1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: EV608138.1, SRR5571257.22543.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN03145485 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGAAGTTTC TTTTCCTGTT TCTTGCCATC CTTCTGGCCA TGGAACCAGT GGTATCAGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001095829.1 |
CDS | 105..347 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001102359.2 |
1 | ATGAAGTTTC TTTTCCTGTT TCTTGCCATC CTTCTGGCCA TGGAACCAGT GGTATCAGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa44775 | |
Clone ID Related Accession (Same CDS sequence) | NM_001101661.2 , XM_025000841.1 , NM_001101661.3 | |
Accession Version | NM_001101661.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 252bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-09-12 | |
Organism | Bos taurus(Cattle) | |
Product | beta-defensin 119 precursor | |
Comment | PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC108216.1. On Aug 30, 2012 this sequence version replaced NM_001101661.1. ##Evidence-Data-START## Transcript exon combination :: BC108216.1, DT852453.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN02822091, SAMN02822092 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGAAGTTTC TTTTCCTGTT TCTTGCCATC CTTCTGGCCA TGGAACCAGT GGTATCAGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001095131.1 |
CDS | 66..317 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001101661.2 |
1 | ATGAAGTTTC TTTTCCTGTT TCTTGCCATC CTTCTGGCCA TGGAACCAGT GGTATCAGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa44775 | |
Clone ID Related Accession (Same CDS sequence) | NM_001101661.2 , XM_025000841.1 , NM_001101661.3 | |
Accession Version | NM_001101661.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 252bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-19 | |
Organism | Bos taurus(cattle) | |
Product | beta-defensin 119 isoform 1 precursor | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from NKLS02000013.1. On Jun 2, 2017 this sequence version replaced NM_001101661.2. Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1). Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: EV609640.1, EV611052.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN03145432, SAMN03145454 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGAAGTTTC TTTTCCTGTT TCTTGCCATC CTTCTGGCCA TGGAACCAGT GGTATCAGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001095131.1 |
CDS | 105..356 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001101661.3 |
1 | ATGAAGTTTC TTTTCCTGTT TCTTGCCATC CTTCTGGCCA TGGAACCAGT GGTATCAGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa02071 | |
Clone ID Related Accession (Same CDS sequence) | NM_001102359.2 , XM_005214877.3 | |
Accession Version | XM_005214877.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 243bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-01-25 | |
Organism | Bos taurus(Cattle) | |
Product | beta-defensin 119 isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104370.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jan 26, 2016 this sequence version replaced XM_005214877.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAGTTTC TTTTCCTGTT TCTTGCCATC CTTCTGGCCA TGGAACCAGT GGTATCAGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005214934.1 |
CDS | 106..348 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005214877.3 |
1 | ATGAAGTTTC TTTTCCTGTT TCTTGCCATC CTTCTGGCCA TGGAACCAGT GGTATCAGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa44775 | |
Clone ID Related Accession (Same CDS sequence) | NM_001101661.2 , XM_025000841.1 , NM_001101661.3 | |
Accession Version | XM_025000841.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 252bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | beta-defensin 119 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037340.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAGTTTC TTTTCCTGTT TCTTGCCATC CTTCTGGCCA TGGAACCAGT GGTATCAGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024856609.1 |
CDS | 254..505 |
Translation |
Target ORF information:
Target ORF information:
|
XM_025000841.1 |
1 | ATGAAGTTTC TTTTCCTGTT TCTTGCCATC CTTCTGGCCA TGGAACCAGT GGTATCAGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
A whole-genome assembly of the domestic cow, Bos taurus. |
Evolution, expression and effectiveness in a cluster of novel bovine beta-defensins. |