Gene Symbol | TPD52 |
Entrez Gene ID | 540235 |
Full Name | tumor protein D52 |
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
ORF » Species Summary » Bos taurus » TPD52 cDNA ORF clone
Gene Symbol | TPD52 |
Entrez Gene ID | 540235 |
Full Name | tumor protein D52 |
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
mRNA | Protein | Name |
---|---|---|
XM_005215524.3 | XP_005215581.1 | tumor protein D52 isoform X2 |
XM_025001716.1 | XP_024857484.1 | tumor protein D52 isoform X1 |
XM_025001718.1 | XP_024857486.1 | tumor protein D52 isoform X4 |
XM_005215523.3 | XP_005215580.1 | tumor protein D52 isoform X1 |
XM_025001717.1 | XP_024857485.1 | tumor protein D52 isoform X2 |
XM_005215523.4 | XP_005215580.1 | tumor protein D52 isoform X3 |
NM_001076922.2 | NP_001070390.1 | tumor protein D52 |
Danio rerio (zebrafish) | tpd52 | NP_001038486.1 |
Mus musculus (house mouse) | Tpd52 | NP_001020432.1 |
Rattus norvegicus (Norway rat) | Tpd52 | NP_001099891.1 |
Homo sapiens (human) | TPD52 | NP_001274069.1 |
TPD52 | XP_002805441.1 | |
Gallus gallus (chicken) | TPD52 | NP_001073222.1 |
Xenopus tropicalis (tropical clawed frog) | tpd52 | NP_001107390.1 |
Bos taurus (cattle) | TPD52 | NP_001070390.1 |
Pan troglodytes (chimpanzee) | TPD52 | XP_003311826.1 |
A whole-genome assembly of the domestic cow, Bos taurus.
Zimin AV, Delcher AL, Florea L, Kelley DR, Schatz MC, Puiu D, Hanrahan F, Pertea G, Van Tassell CP, Sonstegard TS, Mar?ais G, Roberts M, Subramanian P, Yorke JA, Salzberg SL
Genome biology10(4)R42(2009)
Characterization of 954 bovine full-CDS cDNA sequences.
Harhay GP, Sonstegard TS, Keele JW, Heaton MP, Clawson ML, Snelling WM, Wiedmann RT, Van Tassell CP, Smith TP
BMC genomics6166(2005 Nov)
Assignment of the bovine tumor protein D52 gene (TPD52) to the distal half of BTA14 with somatic and radiation cell hybrid panel mapping.
Brunner RM, Kata SR, Womack JE, Goldammer T
Cytogenetic and genome research111(1)96(2005)
Analysis of bovine mammary gland EST and functional annotation of the Bos taurus gene index.
Sonstegard TS, Capuco AV, White J, Van Tassell CP, Connor EE, Cho J, Sultana R, Shade L, Wray JE, Wells KD, Quackenbush J
Mammalian genome : official journal of the International Mammalian Genome Society13(7)373-9(2002 Jul)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Chromosome and linkage mapping of the bone D52 gene
Title: Assignment of the bovine tumor protein D52 gene (TPD52) to the distal half of BTA14 with somatic and radiation cell hybrid panel mapping.
The following TPD52 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the TPD52 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OBa40198 | |
Clone ID Related Accession (Same CDS sequence) | NM_001076922.2 | |
Accession Version | NM_001076922.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 675bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-13 | |
Organism | Bos taurus(cattle) | |
Product | tumor protein D52 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC102644.1. On Aug 30, 2012 this sequence version replaced NM_001076922.1. ##Evidence-Data-START## Transcript exon combination :: BC102644.1, EH179172.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN03145463, SAMN05861761 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGACGGTA GAGAGATGGA TTTTTATGAG GACTACGAGT CCCCATTTGA TTTTAATACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001070390.1 |
CDS | 64..738 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001076922.2 |
1 | ATGGACGGTA GAGAGATGGA TTTTTATGAG GACTACGAGT CCCCATTTGA TTTTAATACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa222409 | |
Clone ID Related Accession (Same CDS sequence) | XM_025001716.1 | |
Accession Version | XM_025001716.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1158bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | tumor protein D52 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037341.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAGAATG AGTGGGAAAA GAGCCACTGG CATTTGAAAA TAACCTTCCT GCGTTTGCCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024857484.1 |
CDS | 16..1173 |
Translation |
Target ORF information:
Target ORF information:
|
XM_025001716.1 |
1 | ATGAAGAATG AGTGGGAAAA GAGCCACTGG CATTTGAAAA TAACCTTCCT GCGTTTGCCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa222410 | |
Clone ID Related Accession (Same CDS sequence) | XM_025001717.1 | |
Accession Version | XM_025001717.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1089bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | tumor protein D52 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037341.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAGAATG AGTGGGAAAA GAGCCACTGG CATTTGAAAA TAACCTTCCT GCGTTTGCCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024857485.1 |
CDS | 16..1104 |
Translation |
Target ORF information:
Target ORF information:
|
XM_025001717.1 |
1 | ATGAAGAATG AGTGGGAAAA GAGCCACTGG CATTTGAAAA TAACCTTCCT GCGTTTGCCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa222411 | |
Clone ID Related Accession (Same CDS sequence) | XM_025001718.1 | |
Accession Version | XM_025001718.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 627bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | tumor protein D52 isoform X4 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037341.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAGATCC CACGAGCCAC AAGTCTGCTG AGAACAGACC CAGTACCTGA GGAAGGAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024857486.1 |
CDS | 16..642 |
Translation |
Target ORF information:
Target ORF information:
|
XM_025001718.1 |
1 | ATGAAGATCC CACGAGCCAC AAGTCTGCTG AGAACAGACC CAGTACCTGA GGAAGGAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa26006 | |
Clone ID Related Accession (Same CDS sequence) | XM_005215523.3 , XM_005215523.4 | |
Accession Version | XM_005215523.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 744bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-01-25 | |
Organism | Bos taurus(cattle) | |
Product | tumor protein D52 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104397.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jan 26, 2016 this sequence version replaced XM_005215523.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGACGGTA GAGAGATGGA TTTTTATGAG GACTACGAGT CCCCATTTGA TTTTAATACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005215580.1 |
CDS | 261..1004 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005215523.3 |
1 | ATGGACGGTA GAGAGATGGA TTTTTATGAG GACTACGAGT CCCCATTTGA TTTTAATACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa26006 | |
Clone ID Related Accession (Same CDS sequence) | XM_005215523.3 , XM_005215523.4 | |
Accession Version | XM_005215523.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 744bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | tumor protein D52 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037341.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 7, 2018 this sequence version replaced XM_005215523.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGACGGTA GAGAGATGGA TTTTTATGAG GACTACGAGT CCCCATTTGA TTTTAATACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005215580.1 |
CDS | 146..889 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005215523.4 |
1 | ATGGACGGTA GAGAGATGGA TTTTTATGAG GACTACGAGT CCCCATTTGA TTTTAATACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa26007 | |
Clone ID Related Accession (Same CDS sequence) | XM_005215524.3 | |
Accession Version | XM_005215524.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 717bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-01-25 | |
Organism | Bos taurus(cattle) | |
Product | tumor protein D52 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104397.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jan 26, 2016 this sequence version replaced XM_005215524.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGACGGTA GAGAGATGGA TTTTTATGAG GACTACGAGT CCCCATTTGA TTTTAATACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005215581.1 |
CDS | 251..967 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005215524.3 |
1 | ATGGACGGTA GAGAGATGGA TTTTTATGAG GACTACGAGT CCCCATTTGA TTTTAATACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
A whole-genome assembly of the domestic cow, Bos taurus. |
Characterization of 954 bovine full-CDS cDNA sequences. |
Assignment of the bovine tumor protein D52 gene (TPD52) to the distal half of BTA14 with somatic and radiation cell hybrid panel mapping. |
Analysis of bovine mammary gland EST and functional annotation of the Bos taurus gene index. |