Gene Symbol | ALKBH1 |
Entrez Gene ID | 538733 |
Full Name | alkB homolog 1, histone H2A dioxygenase |
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
ORF » Species Summary » Bos taurus » ALKBH1 cDNA ORF clone
Gene Symbol | ALKBH1 |
Entrez Gene ID | 538733 |
Full Name | alkB homolog 1, histone H2A dioxygenase |
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
mRNA | Protein | Name |
---|---|---|
NM_001102220.1 | NP_001095690.1 | nucleic acid dioxygenase ALKBH1 |
XM_005212205.3 | XP_005212262.1 | DNA oxidative demethylase ALKBH1 isoform X1 |
XM_005212205.4 | XP_005212262.1 | nucleic acid dioxygenase ALKBH1 isoform X1 |
Pan troglodytes (chimpanzee) | ALKBH1 | XP_510096.2 |
Gallus gallus (chicken) | ALKBH1 | NP_001026723.1 |
Caenorhabditis elegans (roundworm) | Y51H7C.5 | NP_493969.4 |
Homo sapiens (human) | ALKBH1 | NP_006011.2 |
ALKBH1 | XP_002805207.1 | |
Rattus norvegicus (Norway rat) | Alkbh1 | NP_001102188.1 |
Drosophila melanogaster (fruit fly) | AlkB | NP_996458.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP000155 | XP_310984.4 |
Canis lupus familiaris (dog) | ALKBH1 | XP_537525.3 |
Bos taurus (cattle) | ALKBH1 | NP_001095690.1 |
Mus musculus (house mouse) | Alkbh1 | NP_001096035.1 |
Xenopus tropicalis (tropical clawed frog) | alkbh1 | NP_001072394.1 |
Danio rerio (zebrafish) | alkbh1 | NP_001018527.1 |
A whole-genome assembly of the domestic cow, Bos taurus.
Zimin AV, Delcher AL, Florea L, Kelley DR, Schatz MC, Puiu D, Hanrahan F, Pertea G, Van Tassell CP, Sonstegard TS, Mar?ais G, Roberts M, Subramanian P, Yorke JA, Salzberg SL
Genome biology10(4)R42(2009)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following ALKBH1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the ALKBH1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OBa36019 | |
Clone ID Related Accession (Same CDS sequence) | NM_001102220.1 | |
Accession Version | NM_001102220.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 555bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-06-09 | |
Organism | Bos taurus(cattle) | |
Product | nucleic acid dioxygenase ALKBH1 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC151719.1. On or before Aug 31, 2013 this sequence version replaced XR_236235.1, XM_582325.3. ##Evidence-Data-START## Transcript exon combination :: BC151719.1, BC109764.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN03145443, SAMN05861828 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGGGAAGA TGGCGGCGGC AGTGGGTTCC GTGGCGACGC TGGCGGTGCA GCCTGGGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001095690.1 |
CDS | 11..565 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001102220.1 |
1 | ATGGGGAAGA TGGCGGCGGC AGTGGGTTCC GTGGCGACGC TGGCGGTGCA GCCTGGGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa23626 | |
Clone ID Related Accession (Same CDS sequence) | XM_005212205.3 | |
Accession Version | XM_005212205.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1170bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-01-25 | |
Organism | Bos taurus(cattle) | |
Product | DNA oxidative demethylase ALKBH1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104285.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jan 26, 2016 this sequence version replaced XM_005212205.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGGAAGA TGGCGGCGGC AGTGGGTTCC GTGGCGACGC TGGCGGTGCA GCCTGGGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005212262.1 |
CDS | 36..1205 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005212205.3 |
1 | ATGGGGAAGA TGGCGGCGGC AGTGGGTTCC GTGGCGACGC TGGCGGTGCA GCCTGGGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa219658 | |
Clone ID Related Accession (Same CDS sequence) | XM_005212205.4 | |
Accession Version | XM_005212205.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1170bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | nucleic acid dioxygenase ALKBH1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037337.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 7, 2018 this sequence version replaced XM_005212205.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGGAAGA TGGCGGCGGC AGTGGGTTCC GTGGCGACGC TGGCGGTGCA GCCTGGGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005212262.1 |
CDS | 13..1182 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005212205.4 |
1 | ATGGGGAAGA TGGCGGCGGC AGTGGGTTCC GTGGCGACGC TGGCGGTGCA GCCTGGGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
A whole-genome assembly of the domestic cow, Bos taurus. |