Gene Symbol | SIAH1 |
Entrez Gene ID | 534655 |
Full Name | siah E3 ubiquitin protein ligase 1 |
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
ORF » Species Summary » Bos taurus » SIAH1 cDNA ORF clone
Gene Symbol | SIAH1 |
Entrez Gene ID | 534655 |
Full Name | siah E3 ubiquitin protein ligase 1 |
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
mRNA | Protein | Name |
---|---|---|
NM_001193193.2 | NP_001180122.1 | E3 ubiquitin-protein ligase SIAH1 |
XM_005218679.2 | XP_005218736.1 | E3 ubiquitin-protein ligase SIAH1 isoform X1 |
NM_001193193.1 | NP_001180122.1 | E3 ubiquitin-protein ligase SIAH1 |
XM_005218679.1 | XP_005218736.1 | E3 ubiquitin-protein ligase SIAH1 isoform X1 |
XM_024978392.1 | XP_024834160.1 | E3 ubiquitin-protein ligase SIAH1 isoform X1 |
XM_024978393.1 | XP_024834161.1 | E3 ubiquitin-protein ligase SIAH1 isoform X1 |
Mus musculus (house mouse) | Siah1a | NP_033198.1 |
Rattus norvegicus (Norway rat) | Siah1a | NP_543181.2 |
Gallus gallus (chicken) | SIAH1 | XP_414105.2 |
Oryza sativa (rice) | Os03g0356414 | NP_001173420.1 |
Homo sapiens (human) | SIAH1 | NP_001006611.1 |
Pan troglodytes (chimpanzee) | SIAH1 | NP_001233288.1 |
SIAH1 | XP_001114300.1 | |
Canis lupus familiaris (dog) | SIAH1 | XP_003638979.1 |
Drosophila melanogaster (fruit fly) | sina | NP_476725.1 |
Bos taurus (cattle) | SIAH1 | NP_001180122.1 |
Caenorhabditis elegans (roundworm) | siah-1 | NP_500409.1 |
Xenopus tropicalis (tropical clawed frog) | siah1 | NP_001015836.1 |
Danio rerio (zebrafish) | siah1 | NP_955815.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP006127 | XP_001688791.1 |
Oryza sativa (rice) | Os07g0659800 | NP_001060528.1 |
A whole-genome assembly of the domestic cow, Bos taurus.
Zimin AV, Delcher AL, Florea L, Kelley DR, Schatz MC, Puiu D, Hanrahan F, Pertea G, Van Tassell CP, Sonstegard TS, Mar?ais G, Roberts M, Subramanian P, Yorke JA, Salzberg SL
Genome biology10(4)R42(2009)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following SIAH1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the SIAH1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OBa37059 | |
Clone ID Related Accession (Same CDS sequence) | NM_001193193.1 | |
Accession Version | NM_001193193.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 942bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-10-22 | |
Organism | Bos taurus(cattle) | |
Product | E3 ubiquitin-protein ligase SIAH1 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DAAA02046333.1. On Jul 17, 2010 this sequence version replaced XM_870881.3. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: CB454587.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN02822088, SAMN02822089 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGACCGGAA AGTCTCCCTT ACCTTTTCTG TACTCCTGGA GAGGCGTCTT GCTCACTTGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001180122.1 |
CDS | 480..1421 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001193193.1 |
1 | ATGACCGGAA AGTCTCCCTT ACCTTTTCTG TACTCCTGGA GAGGCGTCTT GCTCACTTGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa28473 | |
Clone ID Related Accession (Same CDS sequence) | XM_005218679.1 | |
Accession Version | XM_005218679.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 849bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-01-25 | |
Organism | Bos taurus(cattle) | |
Product | E3 ubiquitin-protein ligase SIAH1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104464.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGCCGTC AGACTGCAAC AGCATTACCT ACTGGAACCT CAAAGTGTGC ACCGTCCCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005218736.1 |
CDS | 207..1055 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005218679.1 |
1 | ATGAGCCGTC AGACTGCAAC AGCATTACCT ACTGGAACCT CAAAGTGTGC ACCGTCCCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa239202 | |
Clone ID Related Accession (Same CDS sequence) | NM_001193193.2 | |
Accession Version | NM_001193193.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 942bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-08-10 | |
Organism | Bos taurus(cattle) | |
Product | E3 ubiquitin-protein ligase SIAH1 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from NKLS02000018.1. On May 29, 2018 this sequence version replaced NM_001193193.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: CB454587.1, SRR5571264.13662.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN05861901 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGACCGGAA AGTCTCCCTT ACCTTTTCTG TACTCCTGGA GAGGCGTCTT GCTCACTTGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001180122.1 |
CDS | 480..1421 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001193193.2 |
1 | ATGACCGGAA AGTCTCCCTT ACCTTTTCTG TACTCCTGGA GAGGCGTCTT GCTCACTTGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa225108 | |
Clone ID Related Accession (Same CDS sequence) | XM_005218679.2 , XM_024978392.1 , XM_024978393.1 | |
Accession Version | XM_005218679.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 849bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | E3 ubiquitin-protein ligase SIAH1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037345.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On May 7, 2018 this sequence version replaced XM_005218679.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGCCGTC AGACTGCAAC AGCATTACCT ACTGGAACCT CAAAGTGTGC ACCGTCCCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005218736.1 |
CDS | 280..1128 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005218679.2 |
1 | ATGAGCCGTC AGACTGCAAC AGCATTACCT ACTGGAACCT CAAAGTGTGC ACCGTCCCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa225108 | |
Clone ID Related Accession (Same CDS sequence) | XM_005218679.2 , XM_024978392.1 , XM_024978393.1 | |
Accession Version | XM_024978392.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 849bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | E3 ubiquitin-protein ligase SIAH1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037345.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGCCGTC AGACTGCAAC AGCATTACCT ACTGGAACCT CAAAGTGTGC ACCGTCCCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024834160.1 |
CDS | 341..1189 |
Translation |
Target ORF information:
Target ORF information:
|
XM_024978392.1 |
1 | ATGAGCCGTC AGACTGCAAC AGCATTACCT ACTGGAACCT CAAAGTGTGC ACCGTCCCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa225108 | |
Clone ID Related Accession (Same CDS sequence) | XM_005218679.2 , XM_024978392.1 , XM_024978393.1 | |
Accession Version | XM_024978393.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 849bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | E3 ubiquitin-protein ligase SIAH1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037345.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGCCGTC AGACTGCAAC AGCATTACCT ACTGGAACCT CAAAGTGTGC ACCGTCCCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024834161.1 |
CDS | 238..1086 |
Translation |
Target ORF information:
Target ORF information:
|
XM_024978393.1 |
1 | ATGAGCCGTC AGACTGCAAC AGCATTACCT ACTGGAACCT CAAAGTGTGC ACCGTCCCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
A whole-genome assembly of the domestic cow, Bos taurus. |