DHX40 cDNA ORF clone, Bos taurus(cattle)

Gene
Clones
gRNAs

Summary

Gene Symbol	DHX40
Entrez Gene ID	533484
Full Name	DEAH-box helicase 40
General protein information	Preferred Names DEAH-box helicase 40 Names probable ATP-dependent RNA helicase DHX40 DEAH (Asp-Glu-Ala-His) box polypeptide 40
Gene Type	protein-coding
Organism	Bos taurus(cattle)

mRNA and Protein(s)

mRNA	Protein	Name
XM_005219904.2	XP_005219961.1	probable ATP-dependent RNA helicase DHX40 isoform X1
NM_001076897.2	NP_001070365.1	probable ATP-dependent RNA helicase DHX40
XM_005219904.3	XP_005219961.1	probable ATP-dependent RNA helicase DHX40 isoform X1

Pathways from BioSystems

Homologies

Bos taurus (cattle)	DHX40	NP_001070365.1
Danio rerio (zebrafish)	dhx40	XP_698769.4
Pan troglodytes (chimpanzee)	DHX40	XP_511618.3
Xenopus tropicalis (tropical clawed frog)	dhx40	NP_001184155.1
Homo sapiens (human)	DHX40	NP_078888.4
Canis lupus familiaris (dog)	DHX40	XP_537699.3
Mus musculus (house mouse)	Dhx40	NP_080467.3
Rattus norvegicus (Norway rat)	Dhx40	NP_001005873.1
Gallus gallus (chicken)	DHX40	XP_001235278.1

Gene Ontology
Bibliography

Related articles in PubMed

A whole-genome assembly of the domestic cow, Bos taurus.
Zimin AV, Delcher AL, Florea L, Kelley DR, Schatz MC, Puiu D, Hanrahan F, Pertea G, Van Tassell CP, Sonstegard TS, Mar?ais G, Roberts M, Subramanian P, Yorke JA, Salzberg SL
Genome biology10(4)R42(2009)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following DHX40 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the DHX40 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
OBa38900	NM_001076897.2 Latest version!	Bos taurus DEAH-box helicase 40 (DHX40), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$426.30 $609.00
OBa29399	XM_005219904.3 Latest version!	Bos taurus DEAH-box helicase 40 (DHX40), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$426.30 $609.00
View Old Accession Versions >>
OBa29399	XM_005219904.2	Bos taurus DEAH-box helicase 40 (DHX40), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$426.30 $609.00
Hide Old Accession Versions >>

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***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

DHX40 ( NM_001076897.2 ) cDNA ORF clone, Bos taurus(cattle) -> NP_001070365.1 Bos taurus DEAH-box helicase 40 (DHX40), mRNA.

Price & Availability↑

CloneID	OBa38900
Clone ID Related Accession (Same CDS sequence)	NM_001076897.2
Accession Version	NM_001076897.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2340bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-05-13
Organism	Bos taurus(cattle)
Product	probable ATP-dependent RNA helicase DHX40
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC123581.1. On Aug 30, 2012 this sequence version replaced NM_001076897.1. ##Evidence-Data-START## Transcript exon combination :: BC123581.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN03145413, SAMN03145414 [ECO:0000348] ##Evidence-Data-END##

ATGTCCCGGT TTCCCGCCGT CGCGGGCAGG GCGCCAAGGC GGCAGGAGGA AGGTGAGAGA 
TCGAGAGACC TCCAGGAAGA GCGGCCTTCG GCAGGTTCCG TCGCGGATAG AGAAGAGAAA 
GGATGCACAT CACAGGAGGG AGGAACTACT CCAACTTTTC CCATTCAGAA ACAAAGAAAA 
AAGCTTATTC AAGCTGTGAG GGACAATTCA TTCCTTATTG TTACTGGAAA TACAGGAAGT 
GGTAAAACAA CTCAACTCCC AAAATATCTA TATGAAGCAG GGTTTTCACA ACACGGTATG 
ATTGGTGTGA CCCAACCACG AAAAGTAGCT GCCATATCTG TTGCTCAGAG GGTTGCTGAA 
GAAATGAAAT GTACATTAGG ATCCAAAGTA GGATACCAAG TTCGTTTTGA TGATTGCAGC 
TCCAAGGAAA CAGCAATCAA ATACATGACT GATGGATGTT TACTGAAACA TATTTTGGGA 
GATCCGAATC TTACCAAGTT CAGTGTCATT ATTTTGGATG AAGCCCATGA GAGAACTCTA 
ACTACAGACA TCTTATTTGG TTTACTGAAG AAGCTATTTC AGGAGAAGTC TCCTAACAGG 
AAGGAGCATT TAAAGGTCGT GGTGATGTCA GCAACAATGG AATTAGCCAA GCTCTCTGCA 
TTCTTTGGAA ATTGTCCAAT ATTTGATATA CCTGGAAGGC TTTATCCAGT CAGAGAAAAA 
TTCTGCAATT TGATTGGTCC ACGAGATAGA GAAAATACTG CATACATTCA AGCGATTGTG 
AAAGTGACCA TGGATATCCA TTTGAATGAA ATGGCTGGAG ACATCTTGGT TTTTCTGACT 
GGTCAGTTTG AAATCGAAAA AAGTTGTGAG TTACTTTTTC AGATGGCAGA ATCTGTTGAT 
TATGATTATG ATGTCCAAGA TACCACTCTA GATGGCTTGT TAATATTGCC CTGTTATGGA 
TCTATGACAA CAGATCAACA GAGAAGAATA TTTTTGCCAC CTCCACCTGG AATTAGAAAA 
TGTGTCATAT CCACCAATAT TTCTGCAACA TCTTTGACAA TAGATGGGAT CAGATACGTG 
GTGGACGGTG GCTTTGTGAA GCAGTTAAAT CACAACCCCA GGTTAGGATT GGATATCCTA 
GAGGTGGTTC CAATTTCAAA GAGTGAGGCG TTACAGCGAA GTGGCCGAGC TGGCAGGACT 
TCCTCAGGAA AATGCTTTCG GATCTATAGT AAAGATTTTT GGAACCAGTG TATGCCTGAC 
CATGTGATCC CTGAGATTAA GAGAACTAGT TTGACGTCTG TAGTTCTGAC CTTAAAGTGC 
CTTGCCATAC ATGATGTAAT AAGGTTTCCC TATTTGGATC CACCTAATGA AAGACTTATT 
TTGGAAGCTC TTAAACAACT GTACCAGTGT GATGCTATCG ACAGGAGTGG CCATGTGACC 
AGATTGGGTT TGTCTATGGT AGAATTTCCT CTCCCTCCAC ATCTGACATG TGCGGTAATA 
AAGGCTGCTT CTCTCGACTG TGAAGATCTA CTGCTTCCAA TAGCAGCAAT GTTGTCTGTG 
GAAAATGTCT TCATTAGACC TGTTGATCCA GAGTACCAGA AGGAAGCAGA GCAGAGACAC 
CGAGAGTTGG CAGCTAAAGC TGGAGGATTT AATGACTTTG CAACTTTAGC CGTCATCTTT 
GAACAGTGCA AATCAAGTGG AGCTCCAGCT TCATGGTGCC AGAAACATTG GATTCATTGG 
AGGTGCTTAT TTTCTGCATT TCGTGTTGAA GCTCAACTTA GAGAACTGAT CAGGAAGCTT 
AAACAGCAAA GTGATTTCCC AAGAGAGACC TTTGAAGGCC CTAAACATGA AGTCCTGCGA 
AGATGTCTTT GTGCCGGTTA TTTCAAAAAT GTAGCTCGAA GGTCTGTTGG GAGAACATTT 
TGCACAATGG ATGGGCGTGG AAGCCCAGTT CATATTCATC CTTCCTCAGC ACTTCATGAA 
CAGGAAACCA AACTTGAATG GATCATTTTT CATGAGGTAT TAGTTACCAC CAAAGTTTAT 
GCAAGAATTG TGTGTCCAAT CCGTTATGAA TGGGTGAGAG ACTTGCTACC CAAGTTGCAT 
GAATTTAATG CACATGATTT GAGCAGTGTG GCCCGCCGTG AAGTGAGAGA AGATGCGCGA 
AGGAGGTGGA CCAATAAGGA AAATGTAAAG CACCGAAAGG ATGGAATATC CAAAGAAGTC 
CTAAAGAAAA TGCAAAGAAG AAATGATGAT AAATCCATAT CAGACGCACG TGCTCGTTTC 
CTCGAGCGGA AGCAGCAGAG GTCCCAGGAT CACAGTGACA CACTGAAGGA AACTGGCTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001070365.1
CDS	54..2393
Translation	MSRFPAVAGRAPRRQEEGERSRDLQEERPSAGSVADREEKGCTSQEGGTTPTFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPRETFEGPKHEVLRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHEFNAHDLSSVARREVREDARRRWTNKENVKHRKDGISKEVLKKMQRRNDDKSISDARARFLERKQQRSQDHSDTLKETG

Target ORF information:

RefSeq Version	NM_001076897.2
Organism	Bos taurus(cattle)
Definition	Bos taurus DEAH-box helicase 40 (DHX40), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001076897.2

ORF Insert Sequence:

ATGTCCCGGT TTCCCGCCGT CGCGGGCAGG GCGCCAAGGC GGCAGGAGGA AGGTGAGAGA 
TCGAGAGACC TCCAGGAAGA GCGGCCTTCG GCAGGTTCCG TCGCGGATAG AGAAGAGAAA 
GGATGCACAT CACAGGAGGG AGGAACTACT CCAACTTTTC CCATTCAGAA ACAAAGAAAA 
AAGCTTATTC AAGCTGTGAG GGACAATTCA TTCCTTATTG TTACTGGAAA TACAGGAAGT 
GGTAAAACAA CTCAACTCCC AAAATATCTA TATGAAGCAG GGTTTTCACA ACACGGTATG 
ATTGGTGTGA CCCAACCACG AAAAGTAGCT GCCATATCTG TTGCTCAGAG GGTTGCTGAA 
GAAATGAAAT GTACATTAGG ATCCAAAGTA GGATACCAAG TTCGTTTTGA TGATTGCAGC 
TCCAAGGAAA CAGCAATCAA ATACATGACT GATGGATGTT TACTGAAACA TATTTTGGGA 
GATCCGAATC TTACCAAGTT CAGTGTCATT ATTTTGGATG AAGCCCATGA GAGAACTCTA 
ACTACAGACA TCTTATTTGG TTTACTGAAG AAGCTATTTC AGGAGAAGTC TCCTAACAGG 
AAGGAGCATT TAAAGGTCGT GGTGATGTCA GCAACAATGG AATTAGCCAA GCTCTCTGCA 
TTCTTTGGAA ATTGTCCAAT ATTTGATATA CCTGGAAGGC TTTATCCAGT CAGAGAAAAA 
TTCTGCAATT TGATTGGTCC ACGAGATAGA GAAAATACTG CATACATTCA AGCGATTGTG 
AAAGTGACCA TGGATATCCA TTTGAATGAA ATGGCTGGAG ACATCTTGGT TTTTCTGACT 
GGTCAGTTTG AAATCGAAAA AAGTTGTGAG TTACTTTTTC AGATGGCAGA ATCTGTTGAT 
TATGATTATG ATGTCCAAGA TACCACTCTA GATGGCTTGT TAATATTGCC CTGTTATGGA 
TCTATGACAA CAGATCAACA GAGAAGAATA TTTTTGCCAC CTCCACCTGG AATTAGAAAA 
TGTGTCATAT CCACCAATAT TTCTGCAACA TCTTTGACAA TAGATGGGAT CAGATACGTG 
GTGGACGGTG GCTTTGTGAA GCAGTTAAAT CACAACCCCA GGTTAGGATT GGATATCCTA 
GAGGTGGTTC CAATTTCAAA GAGTGAGGCG TTACAGCGAA GTGGCCGAGC TGGCAGGACT 
TCCTCAGGAA AATGCTTTCG GATCTATAGT AAAGATTTTT GGAACCAGTG TATGCCTGAC 
CATGTGATCC CTGAGATTAA GAGAACTAGT TTGACGTCTG TAGTTCTGAC CTTAAAGTGC 
CTTGCCATAC ATGATGTAAT AAGGTTTCCC TATTTGGATC CACCTAATGA AAGACTTATT 
TTGGAAGCTC TTAAACAACT GTACCAGTGT GATGCTATCG ACAGGAGTGG CCATGTGACC 
AGATTGGGTT TGTCTATGGT AGAATTTCCT CTCCCTCCAC ATCTGACATG TGCGGTAATA 
AAGGCTGCTT CTCTCGACTG TGAAGATCTA CTGCTTCCAA TAGCAGCAAT GTTGTCTGTG 
GAAAATGTCT TCATTAGACC TGTTGATCCA GAGTACCAGA AGGAAGCAGA GCAGAGACAC 
CGAGAGTTGG CAGCTAAAGC TGGAGGATTT AATGACTTTG CAACTTTAGC CGTCATCTTT 
GAACAGTGCA AATCAAGTGG AGCTCCAGCT TCATGGTGCC AGAAACATTG GATTCATTGG 
AGGTGCTTAT TTTCTGCATT TCGTGTTGAA GCTCAACTTA GAGAACTGAT CAGGAAGCTT 
AAACAGCAAA GTGATTTCCC AAGAGAGACC TTTGAAGGCC CTAAACATGA AGTCCTGCGA 
AGATGTCTTT GTGCCGGTTA TTTCAAAAAT GTAGCTCGAA GGTCTGTTGG GAGAACATTT 
TGCACAATGG ATGGGCGTGG AAGCCCAGTT CATATTCATC CTTCCTCAGC ACTTCATGAA 
CAGGAAACCA AACTTGAATG GATCATTTTT CATGAGGTAT TAGTTACCAC CAAAGTTTAT 
GCAAGAATTG TGTGTCCAAT CCGTTATGAA TGGGTGAGAG ACTTGCTACC CAAGTTGCAT 
GAATTTAATG CACATGATTT GAGCAGTGTG GCCCGCCGTG AAGTGAGAGA AGATGCGCGA 
AGGAGGTGGA CCAATAAGGA AAATGTAAAG CACCGAAAGG ATGGAATATC CAAAGAAGTC 
CTAAAGAAAA TGCAAAGAAG AAATGATGAT AAATCCATAT CAGACGCACG TGCTCGTTTC 
CTCGAGCGGA AGCAGCAGAG GTCCCAGGAT CACAGTGACA CACTGAAGGA AACTGGCTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

DHX40 ( XM_005219904.2 ) cDNA ORF clone, Bos taurus(cattle) -> XP_005219961.1 Bos taurus DEAH-box helicase 40 (DHX40), transcript variant X1, mRNA.

Price & Availability↑

CloneID	OBa29399
Clone ID Related Accession (Same CDS sequence)	XM_005219904.2 , XM_005219904.3
Accession Version	XM_005219904.2	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2280bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-01-25
Organism	Bos taurus(cattle)
Product	probable ATP-dependent RNA helicase DHX40 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104488.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jan 26, 2016 this sequence version replaced XM_005219904.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGTCCCGGT TTCCCGCCGT CGCGGGCAGG GCGCCAAGGC GGCAGGAGGA AGAAGAGAAA 
GGATGCACAT CACAGGAGGG AGGAACTACT CCAACTTTTC CCATTCAGAA ACAAAGAAAA 
AAGCTTATTC AAGCTGTGAG GGACAATTCA TTCCTTATTG TTACTGGAAA TACAGGAAGT 
GGTAAAACAA CTCAACTCCC AAAATATCTA TATGAAGCAG GGTTTTCACA ACACGGTATG 
ATTGGTGTGA CCCAACCACG AAAAGTAGCT GCCATATCTG TTGCTCAGAG GGTTGCTGAA 
GAAATGAAAT GTACATTAGG ATCCAAAGTA GGATACCAAG TTCGTTTTGA TGATTGCAGC 
TCCAAGGAAA CAGCAATCAA ATACATGACT GATGGATGTT TACTGAAACA TATTTTGGGA 
GATCCGAATC TTACCAAGTT CAGTGTCATT ATTTTGGATG AAGCCCATGA GAGAACTCTA 
ACTACAGACA TCTTATTTGG TTTACTGAAG AAGCTATTTC AGGAGAAGTC TCCTAACAGG 
AAGGAGCATT TAAAGGTCGT GGTGATGTCA GCAACAATGG AATTAGCCAA GCTCTCTGCA 
TTCTTTGGAA ATTGTCCAAT ATTTGATATA CCTGGAAGGC TTTATCCAGT CAGAGAAAAA 
TTCTGCAATT TGATTGGTCC ACGAGATAGA GAAAATACTG CATACATTCA AGCGATTGTG 
AAAGTGACCA TGGATATCCA TTTGAATGAA ATGGCTGGAG ACATCTTGGT TTTTCTGACT 
GGTCAGTTTG AAATCGAAAA AAGTTGTGAG TTACTTTTTC AGATGGCAGA ATCTGTTGAT 
TATGATTATG ATGTCCAAGA TACCACTCTA GATGGCTTGT TAATATTGCC CTGTTATGGA 
TCTATGACAA CAGATCAACA GAGAAGAATA TTTTTGCCAC CTCCACCTGG AATTAGAAAA 
TGTGTCATAT CCACCAATAT TTCTGCAACA TCTTTGACAA TAGATGGGAT CAGATACGTG 
GTGGACGGTG GCTTTGTGAA GCAGTTAAAT CACAACCCCA GGTTAGGATT GGATATCCTA 
GAGGTGGTTC CAATTTCAAA GAGTGAGGCG TTACAGCGAA GTGGCCGAGC TGGCAGGACT 
TCCTCAGGAA AATGCTTTCG GATCTATAGT AAAGATTTTT GGAACCAGTG TATGCCTGAC 
CATGTGATCC CTGAGATTAA GAGAACTAGT TTGACGTCTG TAGTTCTGAC CTTAAAGTGC 
CTTGCCATAC ATGATGTAAT AAGGTTTCCC TATTTGGATC CACCTAATGA AAGACTTATT 
TTGGAAGCTC TTAAACAACT TTACCAGTGT GATGCTATTG ACAGGAGTGG CCATGTGACC 
AGATTGGGTT TGTCTATGGT AGAATTTCCT CTCCCTCCAC ATCTGACATG TGCGGTAATA 
AAGGCTGCTT CTCTCGACTG TGAAGATCTA CTGCTTCCAA TAGCAGCAAT GTTGTCTGTG 
GAAAATGTCT TCATTAGACC TGTTGATCCA GAGTACCAGA AGGAAGCAGA GCAGAGACAC 
CGAGAGTTGG CAGCTAAAGC TGGAGGATTT AATGACTTTG CAACTTTAGC CGTCATCTTT 
GAACAGTGCA AATCAAGTGG AGCTCCAGCT TCATGGTGCC AGAAACATTG GATTCATTGG 
AGGTGCTTAT TTTCTGCATT TCGTGTTGAA GCTCAACTTA GAGAACTGAT CAGGAAGCTT 
AAACAGCAAA GTGATTTCCC AAGAGAGACC TTTGAAGGCC CTAAACATGA AGTCCTGCGA 
AGATGTCTTT GTGCCGGTTA TTTCAAAAAT GTAGCTCGAA GGTCTGTTGG GAGAACATTT 
TGCACAATGG ATGGGCGTGG AAGCCCAGTT CATATTCATC CTTCCTCAGC ACTTCATGAA 
CAGGAAACCA AACTTGAATG GATCATTTTT CATGAGGTAT TAGTTACCAC CAAAGTTTAT 
GCAAGAATTG TGTGTCCAAT CCGTTATGAA TGGGTGAGAG ACTTGCTACC CAAGTTGCAT 
GAATTTAATG CACATGATTT GAGCAGTGTG GCCCGCCGTG AAGTGAGAGA AGATGCGCGA 
AGGAGGTGGA CCAATAAGGA AAATGTAAAG CACCGAAAGG ATGGAATATC CAAAGAAGTC 
CTAAAGAAAA TGCAAAGAAG AAATGATGAT AAATCCATAT CAGACGCACG TGCTCGTTTC 
CTCGAGCGGA AGCAGCAGAG GTCCCAGGAT CACAGTGACA CACTGAAGGA AACTGGCTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_005219961.1
CDS	78..2357
Translation	MSRFPAVAGRAPRRQEEEEKGCTSQEGGTTPTFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPRETFEGPKHEVLRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHEFNAHDLSSVARREVREDARRRWTNKENVKHRKDGISKEVLKKMQRRNDDKSISDARARFLERKQQRSQDHSDTLKETG

Target ORF information:

RefSeq Version	XM_005219904.2
Organism	Bos taurus(cattle)
Definition	Bos taurus DEAH-box helicase 40 (DHX40), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_005219904.2

ORF Insert Sequence:

ATGTCCCGGT TTCCCGCCGT CGCGGGCAGG GCGCCAAGGC GGCAGGAGGA AGAAGAGAAA 
GGATGCACAT CACAGGAGGG AGGAACTACT CCAACTTTTC CCATTCAGAA ACAAAGAAAA 
AAGCTTATTC AAGCTGTGAG GGACAATTCA TTCCTTATTG TTACTGGAAA TACAGGAAGT 
GGTAAAACAA CTCAACTCCC AAAATATCTA TATGAAGCAG GGTTTTCACA ACACGGTATG 
ATTGGTGTGA CCCAACCACG AAAAGTAGCT GCCATATCTG TTGCTCAGAG GGTTGCTGAA 
GAAATGAAAT GTACATTAGG ATCCAAAGTA GGATACCAAG TTCGTTTTGA TGATTGCAGC 
TCCAAGGAAA CAGCAATCAA ATACATGACT GATGGATGTT TACTGAAACA TATTTTGGGA 
GATCCGAATC TTACCAAGTT CAGTGTCATT ATTTTGGATG AAGCCCATGA GAGAACTCTA 
ACTACAGACA TCTTATTTGG TTTACTGAAG AAGCTATTTC AGGAGAAGTC TCCTAACAGG 
AAGGAGCATT TAAAGGTCGT GGTGATGTCA GCAACAATGG AATTAGCCAA GCTCTCTGCA 
TTCTTTGGAA ATTGTCCAAT ATTTGATATA CCTGGAAGGC TTTATCCAGT CAGAGAAAAA 
TTCTGCAATT TGATTGGTCC ACGAGATAGA GAAAATACTG CATACATTCA AGCGATTGTG 
AAAGTGACCA TGGATATCCA TTTGAATGAA ATGGCTGGAG ACATCTTGGT TTTTCTGACT 
GGTCAGTTTG AAATCGAAAA AAGTTGTGAG TTACTTTTTC AGATGGCAGA ATCTGTTGAT 
TATGATTATG ATGTCCAAGA TACCACTCTA GATGGCTTGT TAATATTGCC CTGTTATGGA 
TCTATGACAA CAGATCAACA GAGAAGAATA TTTTTGCCAC CTCCACCTGG AATTAGAAAA 
TGTGTCATAT CCACCAATAT TTCTGCAACA TCTTTGACAA TAGATGGGAT CAGATACGTG 
GTGGACGGTG GCTTTGTGAA GCAGTTAAAT CACAACCCCA GGTTAGGATT GGATATCCTA 
GAGGTGGTTC CAATTTCAAA GAGTGAGGCG TTACAGCGAA GTGGCCGAGC TGGCAGGACT 
TCCTCAGGAA AATGCTTTCG GATCTATAGT AAAGATTTTT GGAACCAGTG TATGCCTGAC 
CATGTGATCC CTGAGATTAA GAGAACTAGT TTGACGTCTG TAGTTCTGAC CTTAAAGTGC 
CTTGCCATAC ATGATGTAAT AAGGTTTCCC TATTTGGATC CACCTAATGA AAGACTTATT 
TTGGAAGCTC TTAAACAACT TTACCAGTGT GATGCTATTG ACAGGAGTGG CCATGTGACC 
AGATTGGGTT TGTCTATGGT AGAATTTCCT CTCCCTCCAC ATCTGACATG TGCGGTAATA 
AAGGCTGCTT CTCTCGACTG TGAAGATCTA CTGCTTCCAA TAGCAGCAAT GTTGTCTGTG 
GAAAATGTCT TCATTAGACC TGTTGATCCA GAGTACCAGA AGGAAGCAGA GCAGAGACAC 
CGAGAGTTGG CAGCTAAAGC TGGAGGATTT AATGACTTTG CAACTTTAGC CGTCATCTTT 
GAACAGTGCA AATCAAGTGG AGCTCCAGCT TCATGGTGCC AGAAACATTG GATTCATTGG 
AGGTGCTTAT TTTCTGCATT TCGTGTTGAA GCTCAACTTA GAGAACTGAT CAGGAAGCTT 
AAACAGCAAA GTGATTTCCC AAGAGAGACC TTTGAAGGCC CTAAACATGA AGTCCTGCGA 
AGATGTCTTT GTGCCGGTTA TTTCAAAAAT GTAGCTCGAA GGTCTGTTGG GAGAACATTT 
TGCACAATGG ATGGGCGTGG AAGCCCAGTT CATATTCATC CTTCCTCAGC ACTTCATGAA 
CAGGAAACCA AACTTGAATG GATCATTTTT CATGAGGTAT TAGTTACCAC CAAAGTTTAT 
GCAAGAATTG TGTGTCCAAT CCGTTATGAA TGGGTGAGAG ACTTGCTACC CAAGTTGCAT 
GAATTTAATG CACATGATTT GAGCAGTGTG GCCCGCCGTG AAGTGAGAGA AGATGCGCGA 
AGGAGGTGGA CCAATAAGGA AAATGTAAAG CACCGAAAGG ATGGAATATC CAAAGAAGTC 
CTAAAGAAAA TGCAAAGAAG AAATGATGAT AAATCCATAT CAGACGCACG TGCTCGTTTC 
CTCGAGCGGA AGCAGCAGAG GTCCCAGGAT CACAGTGACA CACTGAAGGA AACTGGCTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

DHX40 ( XM_005219904.3 ) cDNA ORF clone, Bos taurus(cattle) -> XP_005219961.1 Bos taurus DEAH-box helicase 40 (DHX40), transcript variant X1, mRNA.

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CloneID	OBa29399
Clone ID Related Accession (Same CDS sequence)	XM_005219904.2 , XM_005219904.3
Accession Version	XM_005219904.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2280bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-05-06
Organism	Bos taurus(cattle)
Product	probable ATP-dependent RNA helicase DHX40 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037346.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On May 7, 2018 this sequence version replaced XM_005219904.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGTCCCGGT TTCCCGCCGT CGCGGGCAGG GCGCCAAGGC GGCAGGAGGA AGAAGAGAAA 
GGATGCACAT CACAGGAGGG AGGAACTACT CCAACTTTTC CCATTCAGAA ACAAAGAAAA 
AAGCTTATTC AAGCTGTGAG GGACAATTCA TTCCTTATTG TTACTGGAAA TACAGGAAGT 
GGTAAAACAA CTCAACTCCC AAAATATCTA TATGAAGCAG GGTTTTCACA ACACGGTATG 
ATTGGTGTGA CCCAACCACG AAAAGTAGCT GCCATATCTG TTGCTCAGAG GGTTGCTGAA 
GAAATGAAAT GTACATTAGG ATCCAAAGTA GGATACCAAG TTCGTTTTGA TGATTGCAGC 
TCCAAGGAAA CAGCAATCAA ATACATGACT GATGGATGTT TACTGAAACA TATTTTGGGA 
GATCCGAATC TTACCAAGTT CAGTGTCATT ATTTTGGATG AAGCCCATGA GAGAACTCTA 
ACTACAGACA TCTTATTTGG TTTACTGAAG AAGCTATTTC AGGAGAAGTC TCCTAACAGG 
AAGGAGCATT TAAAGGTCGT GGTGATGTCA GCAACAATGG AATTAGCCAA GCTCTCTGCA 
TTCTTTGGAA ATTGTCCAAT ATTTGATATA CCTGGAAGGC TTTATCCAGT CAGAGAAAAA 
TTCTGCAATT TGATTGGTCC ACGAGATAGA GAAAATACTG CATACATTCA AGCGATTGTG 
AAAGTGACCA TGGATATCCA TTTGAATGAA ATGGCTGGAG ACATCTTGGT TTTTCTGACT 
GGTCAGTTTG AAATCGAAAA AAGTTGTGAG TTACTTTTTC AGATGGCAGA ATCTGTTGAT 
TATGATTATG ATGTCCAAGA TACCACTCTA GATGGCTTGT TAATATTGCC CTGTTATGGA 
TCTATGACAA CAGATCAACA GAGAAGAATA TTTTTGCCAC CTCCACCTGG AATTAGAAAA 
TGTGTCATAT CCACCAATAT TTCTGCAACA TCTTTGACAA TAGATGGGAT CAGATACGTG 
GTGGACGGTG GCTTTGTGAA GCAGTTAAAT CACAACCCCA GGTTAGGATT GGATATCCTA 
GAGGTGGTTC CAATTTCAAA GAGTGAGGCG TTACAGCGAA GTGGCCGAGC TGGCAGGACT 
TCCTCAGGAA AATGCTTTCG GATCTATAGT AAAGATTTTT GGAACCAGTG TATGCCTGAC 
CATGTGATCC CTGAGATTAA GAGAACTAGT TTGACGTCTG TAGTTCTGAC CTTAAAGTGC 
CTTGCCATAC ATGATGTAAT AAGGTTTCCC TATTTGGATC CACCTAATGA AAGACTTATT 
TTGGAAGCTC TTAAACAACT TTACCAGTGT GATGCTATTG ACAGGAGTGG CCATGTGACC 
AGATTGGGTT TGTCTATGGT AGAATTTCCT CTCCCTCCAC ATCTGACATG TGCGGTAATA 
AAGGCTGCTT CTCTCGACTG TGAAGATCTA CTGCTTCCAA TAGCAGCAAT GTTGTCTGTG 
GAAAATGTCT TCATTAGACC TGTTGATCCA GAGTACCAGA AGGAAGCAGA GCAGAGACAC 
CGAGAGTTGG CAGCTAAAGC TGGAGGATTT AATGACTTTG CAACTTTAGC CGTCATCTTT 
GAACAGTGCA AATCAAGTGG AGCTCCAGCT TCATGGTGCC AGAAACATTG GATTCATTGG 
AGGTGCTTAT TTTCTGCATT TCGTGTTGAA GCTCAACTTA GAGAACTGAT CAGGAAGCTT 
AAACAGCAAA GTGATTTCCC AAGAGAGACC TTTGAAGGCC CTAAACATGA AGTCCTGCGA 
AGATGTCTTT GTGCCGGTTA TTTCAAAAAT GTAGCTCGAA GGTCTGTTGG GAGAACATTT 
TGCACAATGG ATGGGCGTGG AAGCCCAGTT CATATTCATC CTTCCTCAGC ACTTCATGAA 
CAGGAAACCA AACTTGAATG GATCATTTTT CATGAGGTAT TAGTTACCAC CAAAGTTTAT 
GCAAGAATTG TGTGTCCAAT CCGTTATGAA TGGGTGAGAG ACTTGCTACC CAAGTTGCAT 
GAATTTAATG CACATGATTT GAGCAGTGTG GCCCGCCGTG AAGTGAGAGA AGATGCGCGA 
AGGAGGTGGA CCAATAAGGA AAATGTAAAG CACCGAAAGG ATGGAATATC CAAAGAAGTC 
CTAAAGAAAA TGCAAAGAAG AAATGATGAT AAATCCATAT CAGACGCACG TGCTCGTTTC 
CTCGAGCGGA AGCAGCAGAG GTCCCAGGAT CACAGTGACA CACTGAAGGA AACTGGCTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_005219961.1
CDS	125..2404
Translation	MSRFPAVAGRAPRRQEEEEKGCTSQEGGTTPTFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPRETFEGPKHEVLRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHEFNAHDLSSVARREVREDARRRWTNKENVKHRKDGISKEVLKKMQRRNDDKSISDARARFLERKQQRSQDHSDTLKETG

Target ORF information:

RefSeq Version	XM_005219904.3
Organism	Bos taurus(cattle)
Definition	Bos taurus DEAH-box helicase 40 (DHX40), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_005219904.3

ORF Insert Sequence:

ATGTCCCGGT TTCCCGCCGT CGCGGGCAGG GCGCCAAGGC GGCAGGAGGA AGAAGAGAAA 
GGATGCACAT CACAGGAGGG AGGAACTACT CCAACTTTTC CCATTCAGAA ACAAAGAAAA 
AAGCTTATTC AAGCTGTGAG GGACAATTCA TTCCTTATTG TTACTGGAAA TACAGGAAGT 
GGTAAAACAA CTCAACTCCC AAAATATCTA TATGAAGCAG GGTTTTCACA ACACGGTATG 
ATTGGTGTGA CCCAACCACG AAAAGTAGCT GCCATATCTG TTGCTCAGAG GGTTGCTGAA 
GAAATGAAAT GTACATTAGG ATCCAAAGTA GGATACCAAG TTCGTTTTGA TGATTGCAGC 
TCCAAGGAAA CAGCAATCAA ATACATGACT GATGGATGTT TACTGAAACA TATTTTGGGA 
GATCCGAATC TTACCAAGTT CAGTGTCATT ATTTTGGATG AAGCCCATGA GAGAACTCTA 
ACTACAGACA TCTTATTTGG TTTACTGAAG AAGCTATTTC AGGAGAAGTC TCCTAACAGG 
AAGGAGCATT TAAAGGTCGT GGTGATGTCA GCAACAATGG AATTAGCCAA GCTCTCTGCA 
TTCTTTGGAA ATTGTCCAAT ATTTGATATA CCTGGAAGGC TTTATCCAGT CAGAGAAAAA 
TTCTGCAATT TGATTGGTCC ACGAGATAGA GAAAATACTG CATACATTCA AGCGATTGTG 
AAAGTGACCA TGGATATCCA TTTGAATGAA ATGGCTGGAG ACATCTTGGT TTTTCTGACT 
GGTCAGTTTG AAATCGAAAA AAGTTGTGAG TTACTTTTTC AGATGGCAGA ATCTGTTGAT 
TATGATTATG ATGTCCAAGA TACCACTCTA GATGGCTTGT TAATATTGCC CTGTTATGGA 
TCTATGACAA CAGATCAACA GAGAAGAATA TTTTTGCCAC CTCCACCTGG AATTAGAAAA 
TGTGTCATAT CCACCAATAT TTCTGCAACA TCTTTGACAA TAGATGGGAT CAGATACGTG 
GTGGACGGTG GCTTTGTGAA GCAGTTAAAT CACAACCCCA GGTTAGGATT GGATATCCTA 
GAGGTGGTTC CAATTTCAAA GAGTGAGGCG TTACAGCGAA GTGGCCGAGC TGGCAGGACT 
TCCTCAGGAA AATGCTTTCG GATCTATAGT AAAGATTTTT GGAACCAGTG TATGCCTGAC 
CATGTGATCC CTGAGATTAA GAGAACTAGT TTGACGTCTG TAGTTCTGAC CTTAAAGTGC 
CTTGCCATAC ATGATGTAAT AAGGTTTCCC TATTTGGATC CACCTAATGA AAGACTTATT 
TTGGAAGCTC TTAAACAACT TTACCAGTGT GATGCTATTG ACAGGAGTGG CCATGTGACC 
AGATTGGGTT TGTCTATGGT AGAATTTCCT CTCCCTCCAC ATCTGACATG TGCGGTAATA 
AAGGCTGCTT CTCTCGACTG TGAAGATCTA CTGCTTCCAA TAGCAGCAAT GTTGTCTGTG 
GAAAATGTCT TCATTAGACC TGTTGATCCA GAGTACCAGA AGGAAGCAGA GCAGAGACAC 
CGAGAGTTGG CAGCTAAAGC TGGAGGATTT AATGACTTTG CAACTTTAGC CGTCATCTTT 
GAACAGTGCA AATCAAGTGG AGCTCCAGCT TCATGGTGCC AGAAACATTG GATTCATTGG 
AGGTGCTTAT TTTCTGCATT TCGTGTTGAA GCTCAACTTA GAGAACTGAT CAGGAAGCTT 
AAACAGCAAA GTGATTTCCC AAGAGAGACC TTTGAAGGCC CTAAACATGA AGTCCTGCGA 
AGATGTCTTT GTGCCGGTTA TTTCAAAAAT GTAGCTCGAA GGTCTGTTGG GAGAACATTT 
TGCACAATGG ATGGGCGTGG AAGCCCAGTT CATATTCATC CTTCCTCAGC ACTTCATGAA 
CAGGAAACCA AACTTGAATG GATCATTTTT CATGAGGTAT TAGTTACCAC CAAAGTTTAT 
GCAAGAATTG TGTGTCCAAT CCGTTATGAA TGGGTGAGAG ACTTGCTACC CAAGTTGCAT 
GAATTTAATG CACATGATTT GAGCAGTGTG GCCCGCCGTG AAGTGAGAGA AGATGCGCGA 
AGGAGGTGGA CCAATAAGGA AAATGTAAAG CACCGAAAGG ATGGAATATC CAAAGAAGTC 
CTAAAGAAAA TGCAAAGAAG AAATGATGAT AAATCCATAT CAGACGCACG TGCTCGTTTC 
CTCGAGCGGA AGCAGCAGAG GTCCCAGGAT CACAGTGACA CACTGAAGGA AACTGGCTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

A whole-genome assembly of the domestic cow, Bos taurus.
Genome biology10(4)R42(2009)
Zimin AV,Delcher AL,Florea L,Kelley DR,Schatz MC,Puiu D,Hanrahan F,Pertea G,Van Tassell CP,Sonstegard TS,Mar?ais G,Roberts M,Subramanian P,Yorke JA,Salzberg SL

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DHX40 cDNA ORF clone, Bos taurus(cattle)

Gene

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gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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