Gene Symbol | CLN5 |
Entrez Gene ID | 529186 |
Full Name | CLN5, intracellular trafficking protein |
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
ORF » Species Summary » Bos taurus » CLN5 cDNA ORF clone
Gene Symbol | CLN5 |
Entrez Gene ID | 529186 |
Full Name | CLN5, intracellular trafficking protein |
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
mRNA | Protein | Name |
---|---|---|
NM_001046299.1 | NP_001039764.1 | ceroid-lipofuscinosis neuronal protein 5 |
CLN5 | XP_001086029.2 | |
Mus musculus (house mouse) | Cln5 | NP_001028414.1 |
Gallus gallus (chicken) | CLN5 | XP_004938692.1 |
Danio rerio (zebrafish) | LOC100335010 | XP_002663389.1 |
Danio rerio (zebrafish) | cln5 | XP_697882.1 |
Xenopus tropicalis (tropical clawed frog) | cln5 | XP_002931974.2 |
Homo sapiens (human) | CLN5 | NP_006484.1 |
Bos taurus (cattle) | CLN5 | NP_001039764.1 |
Pan troglodytes (chimpanzee) | CLN5 | XP_509687.3 |
Canis lupus familiaris (dog) | CLN5 | NP_001011556.1 |
Rattus norvegicus (Norway rat) | Cln5 | NP_001178618.1 |
Rattus norvegicus (Norway rat) | RGD1564125 | XP_006232139.1 |
A whole-genome assembly of the domestic cow, Bos taurus.
Zimin AV, Delcher AL, Florea L, Kelley DR, Schatz MC, Puiu D, Hanrahan F, Pertea G, Van Tassell CP, Sonstegard TS, Mar?ais G, Roberts M, Subramanian P, Yorke JA, Salzberg SL
Genome biology10(4)R42(2009)
Neuronal ceroid lipofuscinosis in Devon cattle is caused by a single base duplication (c.662dupG) in the bovine CLN5 gene.
Houweling PJ, Cavanagh JA, Palmer DN, Frugier T, Mitchell NL, Windsor PA, Raadsma HW, Tammen I
Biochimica et biophysica acta1762(10)890-7(2006 Oct)
Radiation hybrid mapping of three candidate genes for bovine Neuronal Ceroid Lipofuscinosis: CLN3, CLN5 and CLN6.
Houweling PJ, Cavanagh JA, Tammen I
Cytogenetic and genome research115(1)5-6(2006)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The candidate genes for bovine Neuronal Ceroid Lipofuscinosis, CLN3, CLN5 and CLN6, have been mapped to facilitate linkage analysis in cattle and sheep.
Title: Radiation hybrid mapping of three candidate genes for bovine Neuronal Ceroid Lipofuscinosis: CLN3, CLN5 and CLN6.
The following CLN5 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CLN5 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OBa41977 | |
Clone ID Related Accession (Same CDS sequence) | NM_001046299.1 | |
Accession Version | NM_001046299.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1077bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-19 | |
Organism | Bos taurus(cattle) | |
Product | ceroid-lipofuscinosis neuronal protein 5 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ421787.1. On Sep 7, 2006 this sequence version replaced XM_607627.2. ##Evidence-Data-START## Transcript exon combination :: DQ421787.1, EV633028.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN03145412, SAMN03145413 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGCGCAGG TGGGGAGTGC TGGTCCGGGG GCCTGCGGCC GGCGGGGCGC GGGCGCAGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001039764.1 |
CDS | 1..1077 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001046299.1 |
1 | ATGGCGCAGG TGGGGAGTGC TGGTCCGGGG GCCTGCGGCC GGCGGGGCGC GGGCGCAGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
A whole-genome assembly of the domestic cow, Bos taurus. |
Neuronal ceroid lipofuscinosis in Devon cattle is caused by a single base duplication (c.662dupG) in the bovine CLN5 gene. |
Radiation hybrid mapping of three candidate genes for bovine Neuronal Ceroid Lipofuscinosis: CLN3, CLN5 and CLN6. |