Gene Symbol | CD1D |
Entrez Gene ID | 516046 |
Full Name | CD1D antigen, d polypeptide |
Synonyms | CD1D1 |
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
ORF » Species Summary » Bos taurus » CD1D cDNA ORF clone
Gene Symbol | CD1D |
Entrez Gene ID | 516046 |
Full Name | CD1D antigen, d polypeptide |
Synonyms | CD1D1 |
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
mRNA | Protein | Name |
---|---|---|
NM_001205381.1 | NP_001192310.1 | CD1D antigen, d polypeptide |
Pan troglodytes (chimpanzee) | CD1D | NP_001065272.1 |
Bos taurus (cattle) | CD1D | NP_001192310.1 |
Mus musculus (house mouse) | Cd1d1 | NP_031665.2 |
Rattus norvegicus (Norway rat) | Cd1d1 | NP_058775.1 |
Bos taurus (cattle) | LOC788175 | XP_003585869.2 |
Bos taurus (cattle) | LOC782367 | XP_002685964.2 |
Homo sapiens (human) | CD1D | NP_001757.1 |
Bos taurus (cattle) | LOC512286 | XP_003585868.1 |
CD1D | NP_001028286.1 |
The bovine CD1D gene has an unusual gene structure and is expressed but cannot present ?-galactosylceramide with a C26 fatty acid.
Nguyen TK, Koets AP, Vordermeier M, Jervis PJ, Cox LR, Graham SP, Santema WJ, Moody DB, van Calenbergh S, Zajonc DM, Besra GS, Van Rhijn I
International immunology25(2)91-8(2013 Feb)
Crystal structures of bovine CD1d reveal altered ?GalCer presentation and a restricted A' pocket unable to bind long-chain glycolipids.
Wang J, Guillaume J, Pauwels N, Van Calenbergh S, Van Rhijn I, Zajonc DM
PloS one7(10)e47989(2012)
The bovine CD1 family contains group 1 CD1 proteins, but no functional CD1d.
Van Rhijn I, Koets AP, Im JS, Piebes D, Reddington F, Besra GS, Porcelli SA, van Eden W, Rutten VP
Journal of immunology (Baltimore, Md. : 1950)176(8)4888-93(2006 Apr)
Characterization of 954 bovine full-CDS cDNA sequences.
Harhay GP, Sonstegard TS, Keele JW, Heaton MP, Clawson ML, Snelling WM, Wiedmann RT, Van Tassell CP, Smith TP
BMC genomics6166(2005 Nov)
Sequence evaluation of four pooled-tissue normalized bovine cDNA libraries and construction of a gene index for cattle.
Smith TP, Grosse WM, Freking BA, Roberts AJ, Stone RT, Casas E, Wray JE, White J, Cho J, Fahrenkrug SC, Bennett GL, Heaton MP, Laegreid WW, Rohrer GA, Chitko-McKown CG, Pertea G, Holt I, Karamycheva S, Liang F, Quackenbush J, Keele JW
Genome research11(4)626-30(2001 Apr)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
results suggest that the natural ligands of boCD1d are smaller lipids
Title: The bovine CD1D gene has an unusual gene structure and is expressed but cannot present ?-galactosylceramide with a C26 fatty acid.
Data indicate that bovine CD1d is able to bind glycosphingolipids (GSLs) with fatty acid chain lengths of C18, while GSLs with fatty acids of C24 do not bind.
Title: Crystal structures of bovine CD1d reveal altered ?GalCer presentation and a restricted A' pocket unable to bind long-chain glycolipids.
The following CD1D gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CD1D cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OBa40852 | |
Clone ID Related Accession (Same CDS sequence) | NM_001205381.1 | |
Accession Version | NM_001205381.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1248bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-06-02 | |
Organism | Bos taurus(cattle) | |
Product | CD1D antigen, d polypeptide | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EE360403.1, EH148110.1, BI976983.1, CK769378.1 and NKLS02000003.1. On or before Apr 20, 2011 this sequence version replaced XR_082689.1, XR_042675.2. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: SRR5571264.12666.1, SRR5571264.21411.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMN03145442, SAMN03145497 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGAGTGGAA CCGGGCTGAG GGCGGAGAGA GGGAGCCAAG CAAGGAAAGG GGCCGACGTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001192310.1 |
CDS | 75..1322 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001205381.1 |
1 | ATGAGTGGAA CCGGGCTGAG GGCGGAGAGA GGGAGCCAAG CAAGGAAAGG GGCCGACGTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
The bovine CD1D gene has an unusual gene structure and is expressed but cannot present ?-galactosylceramide with a C26 fatty acid. |
Crystal structures of bovine CD1d reveal altered ?GalCer presentation and a restricted A' pocket unable to bind long-chain glycolipids. |
The bovine CD1 family contains group 1 CD1 proteins, but no functional CD1d. |
Characterization of 954 bovine full-CDS cDNA sequences. |
Sequence evaluation of four pooled-tissue normalized bovine cDNA libraries and construction of a gene index for cattle. |