Gene Symbol | SMG5 |
Entrez Gene ID | 513598 |
Full Name | SMG5, nonsense mediated mRNA decay factor |
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
ORF » Species Summary » Bos taurus » SMG5 cDNA ORF clone
Gene Symbol | SMG5 |
Entrez Gene ID | 513598 |
Full Name | SMG5, nonsense mediated mRNA decay factor |
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
mRNA | Protein | Name |
---|---|---|
XM_024988339.1 | XP_024844107.1 | protein SMG5 isoform X1 |
NM_001083679.1 | NP_001077148.1 | protein SMG5 |
Pan troglodytes (chimpanzee) | SMG5 | XP_513880.3 |
SMG5 | XP_002801899.1 | |
Canis lupus familiaris (dog) | SMG5 | XP_547535.3 |
Bos taurus (cattle) | SMG5 | NP_001077148.1 |
Rattus norvegicus (Norway rat) | Smg5 | XP_001059906.3 |
Gallus gallus (chicken) | SMG5 | XP_423228.4 |
Xenopus tropicalis (tropical clawed frog) | smg5 | NP_001072622.1 |
Homo sapiens (human) | SMG5 | NP_056142.2 |
Mus musculus (house mouse) | Smg5 | NP_839977.2 |
A whole-genome assembly of the domestic cow, Bos taurus.
Zimin AV, Delcher AL, Florea L, Kelley DR, Schatz MC, Puiu D, Hanrahan F, Pertea G, Van Tassell CP, Sonstegard TS, Mar?ais G, Roberts M, Subramanian P, Yorke JA, Salzberg SL
Genome biology10(4)R42(2009)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following SMG5 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the SMG5 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OBa232728 | |
Clone ID Related Accession (Same CDS sequence) | XM_024988339.1 | |
Accession Version | XM_024988339.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2562bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | protein SMG5 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037330.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGATTGGG CACAGATGGC ATGCCACCGA TGTCTGGTGT ACCTGGGGGA TTTGTCACGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024844107.1 |
CDS | 58..2619 |
Translation |
Target ORF information:
Target ORF information:
|
XM_024988339.1 |
1 | ATGGATTGGG CACAGATGGC ATGCCACCGA TGTCTGGTGT ACCTGGGGGA TTTGTCACGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa36427 | |
Clone ID Related Accession (Same CDS sequence) | NM_001083679.1 | |
Accession Version | NM_001083679.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3051bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-01-29 | |
Organism | Bos taurus(cattle) | |
Product | protein SMG5 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC134680.1. On Apr 5, 2007 this sequence version replaced XM_591302.3. ##Evidence-Data-START## Transcript exon combination :: BC134680.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN03145412, SAMN03145413 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGAGCCAAG GCCCCCCCAC AGGGGAGAGC AGCGAGCCTG AAGCAAAGGT CCTCCACACT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001077148.1 |
CDS | 127..3177 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001083679.1 |
1 | ATGAGCCAAG GCCCCCCCAC AGGGGAGAGC AGCGAGCCTG AAGCAAAGGT CCTCCACACT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
A whole-genome assembly of the domestic cow, Bos taurus. |