Gene Symbol | GPAT4 |
Entrez Gene ID | 511614 |
Full Name | glycerol-3-phosphate acyltransferase 4 |
Synonyms | AGPAT6 |
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
ORF » Species Summary » Bos taurus » GPAT4 cDNA ORF clone
Gene Symbol | GPAT4 |
Entrez Gene ID | 511614 |
Full Name | glycerol-3-phosphate acyltransferase 4 |
Synonyms | AGPAT6 |
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
mRNA | Protein | Name |
---|---|---|
XM_024986242.1 | XP_024842010.1 | glycerol-3-phosphate acyltransferase 4 isoform X2 |
XM_005226105.2 | XP_005226162.1 | glycerol-3-phosphate acyltransferase 4 isoform X1 |
XM_005226105.3 | XP_005226162.1 | glycerol-3-phosphate acyltransferase 4 isoform X1 |
NM_001083669.1 | NP_001077138.1 | glycerol-3-phosphate acyltransferase 4 precursor |
Canis lupus familiaris (dog) | AGPAT6 | XP_532792.2 |
Bos taurus (cattle) | AGPAT6 | NP_001077138.1 |
Danio rerio (zebrafish) | agpat6 | NP_001035339.2 |
Oryza sativa (rice) | Os07g0531600 | NP_001059853.1 |
Mus musculus (house mouse) | Agpat6 | NP_061213.2 |
Caenorhabditis elegans (roundworm) | acl-5 | NP_001041282.1 |
Arabidopsis thaliana (thale cress) | GPAT9 | NP_568925.1 |
Rattus norvegicus (Norway rat) | Agpat6 | NP_001041314.1 |
Gallus gallus (chicken) | AGPAT6 | XP_004947663.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP002084 | XP_003436023.1 |
Caenorhabditis elegans (roundworm) | acl-4 | NP_508379.1 |
Xenopus tropicalis (tropical clawed frog) | agpat6 | NP_001123822.1 |
Homo sapiens (human) | AGPAT6 | NP_848934.1 |
Pan troglodytes (chimpanzee) | AGPAT6 | XP_001138888.1 |
Drosophila melanogaster (fruit fly) | CG3209 | NP_726415.1 |
Expression variants of the lipogenic AGPAT6 gene affect diverse milk composition phenotypes in Bos taurus.
Littlejohn MD, Tiplady K, Lopdell T, Law TA, Scott A, Harland C, Sherlock R, Henty K, Obolonkin V, Lehnert K, Macgibbon A, Spelman RJ, Davis SR, Snell RG
PloS one9(1)e85757(2014)
A whole-genome assembly of the domestic cow, Bos taurus.
Zimin AV, Delcher AL, Florea L, Kelley DR, Schatz MC, Puiu D, Hanrahan F, Pertea G, Van Tassell CP, Sonstegard TS, Mar?ais G, Roberts M, Subramanian P, Yorke JA, Salzberg SL
Genome biology10(4)R42(2009)
ACSL1, AGPAT6, FABP3, LPIN1, and SLC27A6 are the most abundant isoforms in bovine mammary tissue and their expression is affected by stage of lactation.
Bionaz M, Loor JJ
The Journal of nutrition138(6)1019-24(2008 Jun)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Variants affecting the expression of AGPAT6 are causally involved in differential milk fat synthesis, with pleiotropic consequences for a diverse range of other milk components.
Title: Expression variants of the lipogenic AGPAT6 gene affect diverse milk composition phenotypes in Bos taurus.
The results of this study suggest that suggest that SLC27A6, ACSL1, FABP3, AGPAT6, and LPIN1 coordinately regulate the channeling of fatty acids toward copious milk fat synthesis in bovine mammary.
Title: ACSL1, AGPAT6, FABP3, LPIN1, and SLC27A6 are the most abundant isoforms in bovine mammary tissue and their expression is affected by stage of lactation.
The following GPAT4 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the GPAT4 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OBa42686 | |
Clone ID Related Accession (Same CDS sequence) | NM_001083669.1 | |
Accession Version | NM_001083669.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1371bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-23 | |
Organism | Bos taurus(cattle) | |
Product | glycerol-3-phosphate acyltransferase 4 precursor | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from EF432784.1. On Apr 5, 2007 this sequence version replaced XM_866018.2. ##Evidence-Data-START## Transcript exon combination :: BC146204.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN03145412, SAMN03145413 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGTTCCTGC TGCTGCCTTT CGACAGCCTG ATTGTCAGCC TCCTGGGCAT CTCCCTGACG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001077138.1 |
CDS | 291..1661 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001083669.1 |
1 | ATGTTCCTGC TGCTGCCTTT CGACAGCCTG ATTGTCAGCC TCCTGGGCAT CTCCCTGACG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa34013 | |
Clone ID Related Accession (Same CDS sequence) | XM_005226105.2 , XM_005226105.3 | |
Accession Version | XM_005226105.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1371bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-01-25 | |
Organism | Bos taurus(cattle) | |
Product | glycerol-3-phosphate acyltransferase 4 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104610.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jan 26, 2016 this sequence version replaced XM_005226105.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTTCCTGC TGCTGCCTTT CGACAGCCTG ATTGTCAGCC TCCTGGGCAT CTCCCTGACG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005226162.1 |
CDS | 923..2293 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005226105.2 |
1 | ATGTTCCTGC TGCTGCCTTT CGACAGCCTG ATTGTCAGCC TCCTGGGCAT CTCCCTGACG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa34013 | |
Clone ID Related Accession (Same CDS sequence) | XM_005226105.2 , XM_005226105.3 | |
Accession Version | XM_005226105.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1371bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | glycerol-3-phosphate acyltransferase 4 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037354.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On May 7, 2018 this sequence version replaced XM_005226105.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTTCCTGC TGCTGCCTTT CGACAGCCTG ATTGTCAGCC TCCTGGGCAT CTCCCTGACG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005226162.1 |
CDS | 935..2305 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005226105.3 |
1 | ATGTTCCTGC TGCTGCCTTT CGACAGCCTG ATTGTCAGCC TCCTGGGCAT CTCCCTGACG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa231343 | |
Clone ID Related Accession (Same CDS sequence) | XM_024986242.1 | |
Accession Version | XM_024986242.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1191bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | glycerol-3-phosphate acyltransferase 4 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037354.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAGAGAG GAGCCAAGGA GAAGAACCAC CAGCTTTACA AGCCCTACAC CAATGGAATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024842010.1 |
CDS | 165..1355 |
Translation |
Target ORF information:
Target ORF information:
|
XM_024986242.1 |
1 | ATGGAGAGAG GAGCCAAGGA GAAGAACCAC CAGCTTTACA AGCCCTACAC CAATGGAATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Expression variants of the lipogenic AGPAT6 gene affect diverse milk composition phenotypes in Bos taurus. |
A whole-genome assembly of the domestic cow, Bos taurus. |
ACSL1, AGPAT6, FABP3, LPIN1, and SLC27A6 are the most abundant isoforms in bovine mammary tissue and their expression is affected by stage of lactation. |