Gene Symbol | DPH3 |
Entrez Gene ID | 511579 |
Full Name | diphthamide biosynthesis 3 |
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
ORF » Species Summary » Bos taurus » DPH3 cDNA ORF clone
Gene Symbol | DPH3 |
Entrez Gene ID | 511579 |
Full Name | diphthamide biosynthesis 3 |
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
mRNA | Protein | Name |
---|---|---|
NM_001113299.2 | NP_001106770.1 | DPH3 homolog isoform 1 |
XM_024980433.1 | XP_024836201.1 | DPH3 homolog isoform X3 |
NM_001303541.1 | NP_001290470.1 | DPH3 homolog isoform 2 |
XM_024980398.1 | XP_024836166.1 | DPH3 homolog isoform X2 |
XM_024980367.1 | XP_024836135.1 | DPH3 homolog isoform X1 |
ZCSL2 | XP_001081966.1 | |
Bos taurus (cattle) | DPH3 | NP_001106770.1 |
Danio rerio (zebrafish) | dph3 | NP_001153296.1 |
Drosophila melanogaster (fruit fly) | CG14701 | NP_650057.1 |
Homo sapiens (human) | DPH3 | NP_996662.1 |
Canis lupus familiaris (dog) | DPH3 | XP_853149.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP011288 | XP_309358.1 |
Xenopus tropicalis (tropical clawed frog) | dph3 | NP_001016157.1 |
Gallus gallus (chicken) | DPH3 | XP_418742.3 |
Pan troglodytes (chimpanzee) | DPH3 | XP_516312.2 |
Mus musculus (house mouse) | Dph3 | NP_001271275.1 |
Rattus norvegicus (Norway rat) | Dph3 | NP_001128322.1 |
Caenorhabditis elegans (roundworm) | dph-3 | NP_001255419.1 |
A whole-genome assembly of the domestic cow, Bos taurus.
Zimin AV, Delcher AL, Florea L, Kelley DR, Schatz MC, Puiu D, Hanrahan F, Pertea G, Van Tassell CP, Sonstegard TS, Mar?ais G, Roberts M, Subramanian P, Yorke JA, Salzberg SL
Genome biology10(4)R42(2009)
A second generation radiation hybrid map to aid the assembly of the bovine genome sequence.
Jann OC, Aerts J, Jones M, Hastings N, Law A, McKay S, Marques E, Prasad A, Yu J, Moore SS, Floriot S, Mah? MF, Eggen A, Silveri L, Negrini R, Milanesi E, Ajmone-Marsan P, Valentini A, Marchitelli C, Savarese MC, Janitz M, Herwig R, Hennig S, Gorni C, Connor EE, Sonstegard TS, Smith T, Dr?gem?ller C, Williams JL
BMC genomics7283(2006 Nov)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following DPH3 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the DPH3 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OBa44184 | |
Clone ID Related Accession (Same CDS sequence) | NM_001113299.2 | |
Accession Version | NM_001113299.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 249bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-21 | |
Organism | Bos taurus(cattle) | |
Product | DPH3 homolog isoform 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from DY113139.1, BC116080.1 and NKLS02000001.1. On Jan 13, 2015 this sequence version replaced NM_001113299.1. Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1). ##Evidence-Data-START## Transcript exon combination :: SRR5765710.8680.1, SRR5571254.10777.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN03145413, SAMN03145414 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGCGGTAT TTCACGATGA GGTGGAGATC GAGGACTTCC AATACGACGA AGACTCGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001106770.1 |
CDS | 124..372 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001113299.2 |
1 | ATGGCGGTAT TTCACGATGA GGTGGAGATC GAGGACTTCC AATACGACGA AGACTCGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa48057 | |
Clone ID Related Accession (Same CDS sequence) | NM_001303541.1 | |
Accession Version | NM_001303541.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 174bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-19 | |
Organism | Bos taurus(cattle) | |
Product | DPH3 homolog isoform 2 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from DY113139.1, EH137195.1, BC116080.1 and NKLS02000001.1. On Jan 13, 2015 this sequence version replaced XM_005202131.2. Transcript Variant: This variant (2) lacks an in-frame exon compared to variant 1. It encodes isoform 2, which is shorter than isoform 1. ##Evidence-Data-START## Transcript exon combination :: SRR5571262.9240.1, SRR5571264.12235.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN03145412, SAMN03145413 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGCGGTAT TTCACGATGA GGTGGAGATC GAGGACTTCC AATACGACGA AGACTCGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001290470.1 |
CDS | 124..297 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001303541.1 |
1 | ATGGCGGTAT TTCACGATGA GGTGGAGATC GAGGACTTCC AATACGACGA AGACTCGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa218697 | |
Clone ID Related Accession (Same CDS sequence) | XM_024980367.1 | |
Accession Version | XM_024980367.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 627bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | DPH3 homolog isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037328.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGGTAT TTCACGATGA GGTGGAGATC GAGGACTTCC AATACGACGA AGACTCGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024836135.1 |
CDS | 147..773 |
Translation |
Target ORF information:
Target ORF information:
|
XM_024980367.1 |
1 | ATGGCGGTAT TTCACGATGA GGTGGAGATC GAGGACTTCC AATACGACGA AGACTCGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa218698 | |
Clone ID Related Accession (Same CDS sequence) | XM_024980398.1 | |
Accession Version | XM_024980398.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 621bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | DPH3 homolog isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037328.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGGTAT TTCACGATGA GGTGGAGATC GAGGACTTCC AATACGACGA AGACTCGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024836166.1 |
CDS | 147..767 |
Translation |
Target ORF information:
Target ORF information:
|
XM_024980398.1 |
1 | ATGGCGGTAT TTCACGATGA GGTGGAGATC GAGGACTTCC AATACGACGA AGACTCGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa218699 | |
Clone ID Related Accession (Same CDS sequence) | XM_024980433.1 | |
Accession Version | XM_024980433.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 528bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | DPH3 homolog isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037328.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGGTAT TTCACGATGA GGTGGAGATC GAGGACTTCC AATACGACGA AGACTCGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024836201.1 |
CDS | 147..674 |
Translation |
Target ORF information:
Target ORF information:
|
XM_024980433.1 |
1 | ATGGCGGTAT TTCACGATGA GGTGGAGATC GAGGACTTCC AATACGACGA AGACTCGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
A whole-genome assembly of the domestic cow, Bos taurus. |
A second generation radiation hybrid map to aid the assembly of the bovine genome sequence. |