Gene Symbol | DNAJC6 |
Entrez Gene ID | 317659 |
Full Name | DnaJ heat shock protein family (Hsp40) member C6 |
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
ORF » Species Summary » Bos taurus » DNAJC6 cDNA ORF clone
Gene Symbol | DNAJC6 |
Entrez Gene ID | 317659 |
Full Name | DnaJ heat shock protein family (Hsp40) member C6 |
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
mRNA | Protein | Name |
---|---|---|
XM_005204448.3 | XP_005204505.1 | putative tyrosine-protein phosphatase auxilin isoform X1 |
XM_005204449.3 | XP_005204506.1 | putative tyrosine-protein phosphatase auxilin isoform X2 |
NM_174836.2 | NP_777261.1 | putative tyrosine-protein phosphatase auxilin |
XM_005204448.2 | XP_005204505.1 | putative tyrosine-protein phosphatase auxilin isoform X1 |
XM_005204449.4 | XP_005204506.1 | putative tyrosine-protein phosphatase auxilin isoform X2 |
DNAJC6 | XP_001090057.1 | |
Danio rerio (zebrafish) | dnajc6 | XP_005165940.1 |
Homo sapiens (human) | DNAJC6 | NP_001243793.1 |
Pan troglodytes (chimpanzee) | DNAJC6 | XP_001161657.1 |
Mus musculus (house mouse) | Dnajc6 | NP_001158055.1 |
Xenopus tropicalis (tropical clawed frog) | dnajc6 | NP_001120147.1 |
Canis lupus familiaris (dog) | DNAJC6 | XP_546673.2 |
Rattus norvegicus (Norway rat) | Dnajc6 | NP_001101419.1 |
Bos taurus (cattle) | DNAJC6 | NP_777261.1 |
Gallus gallus (chicken) | DNAJC6 | NP_001170886.1 |
Interactions of peripheral proteins with model membranes as viewed by molecular dynamics simulations.
Kalli AC, Sansom MS
Biochemical Society transactions42(5)1418-24(2014 Oct)
Structure of clathrin coat with bound Hsc70 and auxilin: mechanism of Hsc70-facilitated disassembly.
Xing Y, B?cking T, Wolf M, Grigorieff N, Kirchhausen T, Harrison SC
The EMBO journal29(3)655-65(2010 Feb)
A whole-genome assembly of the domestic cow, Bos taurus.
Zimin AV, Delcher AL, Florea L, Kelley DR, Schatz MC, Puiu D, Hanrahan F, Pertea G, Van Tassell CP, Sonstegard TS, Mar?ais G, Roberts M, Subramanian P, Yorke JA, Salzberg SL
Genome biology10(4)R42(2009)
A motif in the clathrin heavy chain required for the Hsc70/auxilin uncoating reaction.
Rapoport I, Boll W, Yu A, B?cking T, Kirchhausen T
Molecular biology of the cell19(1)405-13(2008 Jan)
Recruitment dynamics of GAK and auxilin to clathrin-coated pits during endocytosis.
Lee DW, Wu X, Eisenberg E, Greene LE
Journal of cell science119(Pt 17)3502-12(2006 Sep)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Data suggest that anionic lipids (such as phosphatidylinositol phosphates) play crucial role in localization of peripheral membrane proteins (such as auxilin-1, PTEN [phosphatase and tensin homolog], and talin-1). [review-like article]
Title: Interactions of peripheral proteins with model membranes as viewed by molecular dynamics simulations.
Structure of clathrin coat with bound Hsc70 and auxilin.
Title: Structure of clathrin coat with bound Hsc70 and auxilin: mechanism of Hsc70-facilitated disassembly.
Coats assembled from recombinant clathrin are good substrates for ATP- and auxilin-dependent, Hsc70-catalyzed uncoating.
Title: A motif in the clathrin heavy chain required for the Hsc70/auxilin uncoating reaction.
Results describe the recruitment dynamics of GAK and auxilin to clathrin-coated pits during endocytosis.
Title: Recruitment dynamics of GAK and auxilin to clathrin-coated pits during endocytosis.
timing of auxilin recruitment determines the onset of uncoating
Title: A burst of auxilin recruitment determines the onset of clathrin-coated vesicle uncoating.
The following DNAJC6 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the DNAJC6 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OBa41679 | |
Clone ID Related Accession (Same CDS sequence) | NM_174836.2 | |
Accession Version | NM_174836.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2733bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-24 | |
Organism | Bos taurus(cattle) | |
Product | putative tyrosine-protein phosphatase auxilin | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from U09237.1. On or before Mar 29, 2005 this sequence version replaced XM_602592.1, XM_616580.1, NM_174836.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: U09237.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN03145431, SAMN03145437 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGACAGCT CAGGTGCCTC ATCTCCAGAC ATGGAGCCCA GCTATGGCGG AGGTCTTTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_777261.1 |
CDS | 132..2864 |
Translation |
Target ORF information:
Target ORF information:
|
NM_174836.2 |
1 | ATGGACAGCT CAGGTGCCTC ATCTCCAGAC ATGGAGCCCA GCTATGGCGG AGGTCTTTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa17835 | |
Clone ID Related Accession (Same CDS sequence) | XM_005204448.2 | |
Accession Version | XM_005204448.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2835bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-01-25 | |
Organism | Bos taurus(cattle) | |
Product | putative tyrosine-protein phosphatase auxilin isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003103871.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 30, 2014 this sequence version replaced XM_005204448.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGAGCAA CTGAGAAGAG CGGCAAGAAG AGCCGGAGGC TGTTTTCTTC GCTGCGGCCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005204505.1 |
CDS | 58..2892 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005204448.2 |
1 | ATGGGAGCAA CTGAGAAGAG CGGCAAGAAG AGCCGGAGGC TGTTTTCTTC GCTGCGGCCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa17836 | |
Clone ID Related Accession (Same CDS sequence) | XM_005204449.3 | |
Accession Version | XM_005204449.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2742bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-01-25 | |
Organism | Bos taurus(cattle) | |
Product | putative tyrosine-protein phosphatase auxilin isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003103871.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jan 26, 2016 this sequence version replaced XM_005204449.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAAGATT CTGAAAATAA AGGTGCCTCA TCTCCAGACA TGGAGCCCAG CTATGGCGGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005204506.1 |
CDS | 184..2925 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005204449.3 |
1 | ATGAAAGATT CTGAAAATAA AGGTGCCTCA TCTCCAGACA TGGAGCCCAG CTATGGCGGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa232490 | |
Clone ID Related Accession (Same CDS sequence) | XM_005204448.3 | |
Accession Version | XM_005204448.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2835bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | putative tyrosine-protein phosphatase auxilin isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037330.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On May 7, 2018 this sequence version replaced XM_005204448.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGAGCAA CTGAGAAGAG CGGCAAGAAG AGCCGGAGGC TGTTTTCTTC GCTGCGGCCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005204505.1 |
CDS | 82..2916 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005204448.3 |
1 | ATGGGAGCAA CTGAGAAGAG CGGCAAGAAG AGCCGGAGGC TGTTTTCTTC GCTGCGGCCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa232491 | |
Clone ID Related Accession (Same CDS sequence) | XM_005204449.4 | |
Accession Version | XM_005204449.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2742bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | putative tyrosine-protein phosphatase auxilin isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037330.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 7, 2018 this sequence version replaced XM_005204449.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAAGATT CTGAAAATAA AGGTGCCTCA TCTCCAGACA TGGAGCCCAG CTATGGCGGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005204506.1 |
CDS | 180..2921 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005204449.4 |
1 | ATGAAAGATT CTGAAAATAA AGGTGCCTCA TCTCCAGACA TGGAGCCCAG CTATGGCGGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Interactions of peripheral proteins with model membranes as viewed by molecular dynamics simulations. |
Structure of clathrin coat with bound Hsc70 and auxilin: mechanism of Hsc70-facilitated disassembly. |
A whole-genome assembly of the domestic cow, Bos taurus. |
A motif in the clathrin heavy chain required for the Hsc70/auxilin uncoating reaction. |
Recruitment dynamics of GAK and auxilin to clathrin-coated pits during endocytosis. |