Gene Symbol | PPFIA1 |
Entrez Gene ID | 100139635 |
Full Name | PTPRF interacting protein alpha 1 |
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
ORF » Species Summary » Bos taurus » PPFIA1 cDNA ORF clone
Gene Symbol | PPFIA1 |
Entrez Gene ID | 100139635 |
Full Name | PTPRF interacting protein alpha 1 |
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
mRNA | Protein | Name |
---|---|---|
XM_015461328.1 | XP_015316814.1 | liprin-alpha-1 isoform X7 |
XM_024986955.1 | XP_024842723.1 | liprin-alpha-1 isoform X5 |
XM_005227265.3 | XP_005227322.1 | liprin-alpha-1 isoform X3 |
XM_024986952.1 | XP_024842720.1 | liprin-alpha-1 isoform X2 |
XM_024986953.1 | XP_024842721.1 | liprin-alpha-1 isoform X3 |
XM_024986959.1 | XP_024842727.1 | liprin-alpha-1 isoform X9 |
NM_001191377.3 | NP_001178306.1 | liprin-alpha-1 |
XM_015461323.1 | XP_015316809.1 | liprin-alpha-1 isoform X1 |
XM_015461324.1 | XP_015316810.1 | liprin-alpha-1 isoform X2 |
XM_015461326.1 | XP_015316812.1 | liprin-alpha-1 isoform X5 |
XM_005227265.4 | XP_005227322.1 | liprin-alpha-1 isoform X1 |
XM_024986956.1 | XP_024842724.1 | liprin-alpha-1 isoform X6 |
XM_024986957.1 | XP_024842725.1 | liprin-alpha-1 isoform X7 |
NM_001191377.1 | NP_001178306.1 | liprin-alpha-1 |
XM_015461325.1 | XP_015316811.1 | liprin-alpha-1 isoform X4 |
XM_015461327.1 | XP_015316813.1 | liprin-alpha-1 isoform X6 |
XM_010821198.2 | XP_010819500.1 | liprin-alpha-1 isoform X8 |
XM_024986958.1 | XP_024842726.1 | liprin-alpha-1 isoform X8 |
NM_001191377.2 | NP_001178306.1 | liprin-alpha-1 |
XM_024986954.1 | XP_024842722.1 | liprin-alpha-1 isoform X4 |
Homo sapiens (human) | PPFIA1 | NP_003617.1 |
Pan troglodytes (chimpanzee) | PPFIA1 | XP_003952009.1 |
Gallus gallus (chicken) | PPFIA1 | XP_421074.4 |
Danio rerio (zebrafish) | zgc:171298 | NP_001104714.1 |
Xenopus tropicalis (tropical clawed frog) | ppfia1 | NP_001121469.1 |
Mus musculus (house mouse) | Ppfia1 | NP_001182015.1 |
Bos taurus (cattle) | PPFIA1 | NP_001178306.1 |
Rattus norvegicus (Norway rat) | Ppfia1 | NP_001099790.2 |
Canis lupus familiaris (dog) | PPFIA1 | XP_005631430.1 |
A whole-genome assembly of the domestic cow, Bos taurus.
Zimin AV, Delcher AL, Florea L, Kelley DR, Schatz MC, Puiu D, Hanrahan F, Pertea G, Van Tassell CP, Sonstegard TS, Mar?ais G, Roberts M, Subramanian P, Yorke JA, Salzberg SL
Genome biology10(4)R42(2009)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following PPFIA1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the PPFIA1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OBa216175 | |
Clone ID Related Accession (Same CDS sequence) | NM_001191377.2 | |
Accession Version | NM_001191377.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3609bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-10-22 | |
Organism | Bos taurus(cattle) | |
Product | liprin-alpha-1 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DAAA02063676.1. On Jun 30, 2017 this sequence version replaced NM_001191377.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMN02403652, SAMN02403653 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGATGTGCG AGGTGATGCC GACCATCAGT GAAGCAGAAG GCCCCCCGGG AGGAAGTGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001178306.1 |
CDS | 1..3609 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001191377.2 |
1 | ATGATGTGCG AGGTGATGCC GACCATCAGT GAAGCAGAAG GCCCCCCGGG AGGAAGTGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa231818 | |
Clone ID Related Accession (Same CDS sequence) | XM_024986955.1 , NM_001191377.3 | |
Accession Version | NM_001191377.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3609bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-07-06 | |
Organism | Bos taurus(cattle) | |
Product | liprin-alpha-1 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from NKLS02000029.1. On May 29, 2018 this sequence version replaced NM_001191377.2. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: SRR5721694.1539.1, SRR5571259.33055.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN03145413, SAMN03145414 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGATGTGCG AGGTGATGCC GACCATCAGT GAAGCAGAAG GCCCCCCGGG AGGAAGTGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001178306.1 |
CDS | 1..3609 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001191377.3 |
1 | ATGATGTGCG AGGTGATGCC GACCATCAGT GAAGCAGAAG GCCCCCCGGG AGGAAGTGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa231814 | |
Clone ID Related Accession (Same CDS sequence) | XM_005227265.4 | |
Accession Version | XM_005227265.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3699bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | liprin-alpha-1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037356.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 7, 2018 this sequence version replaced XM_005227265.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATGTGCG AGGTGATGCC GACCATCAGT GAAGCAGAAG GCCCCCCGGG AGGAAGTGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005227322.1 |
CDS | 136..3834 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005227265.4 |
1 | ATGATGTGCG AGGTGATGCC GACCATCAGT GAAGCAGAAG GCCCCCCGGG AGGAAGTGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa231815 | |
Clone ID Related Accession (Same CDS sequence) | XM_024986952.1 | |
Accession Version | XM_024986952.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3672bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | liprin-alpha-1 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037356.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATGTGCG AGGTGATGCC GACCATCAGT GAAGCAGAAG GCCCCCCGGG AGGAAGTGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024842720.1 |
CDS | 136..3807 |
Translation |
Target ORF information:
Target ORF information:
|
XM_024986952.1 |
1 | ATGATGTGCG AGGTGATGCC GACCATCAGT GAAGCAGAAG GCCCCCCGGG AGGAAGTGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa231816 | |
Clone ID Related Accession (Same CDS sequence) | XM_024986953.1 | |
Accession Version | XM_024986953.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3666bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | liprin-alpha-1 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037356.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATGTGCG AGGTGATGCC GACCATCAGT GAAGCAGAAG GCCCCCCGGG AGGAAGTGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024842721.1 |
CDS | 136..3801 |
Translation |
Target ORF information:
Target ORF information:
|
XM_024986953.1 |
1 | ATGATGTGCG AGGTGATGCC GACCATCAGT GAAGCAGAAG GCCCCCCGGG AGGAAGTGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa231817 | |
Clone ID Related Accession (Same CDS sequence) | XM_024986954.1 | |
Accession Version | XM_024986954.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3639bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | liprin-alpha-1 isoform X4 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037356.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATGTGCG AGGTGATGCC GACCATCAGT GAAGCAGAAG GCCCCCCGGG AGGAAGTGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024842722.1 |
CDS | 136..3774 |
Translation |
Target ORF information:
Target ORF information:
|
XM_024986954.1 |
1 | ATGATGTGCG AGGTGATGCC GACCATCAGT GAAGCAGAAG GCCCCCCGGG AGGAAGTGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa231818 | |
Clone ID Related Accession (Same CDS sequence) | XM_024986955.1 , NM_001191377.3 | |
Accession Version | XM_024986955.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3609bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | liprin-alpha-1 isoform X5 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037356.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATGTGCG AGGTGATGCC GACCATCAGT GAAGCAGAAG GCCCCCCGGG AGGAAGTGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024842723.1 |
CDS | 144..3752 |
Translation |
Target ORF information:
Target ORF information:
|
XM_024986955.1 |
1 | ATGATGTGCG AGGTGATGCC GACCATCAGT GAAGCAGAAG GCCCCCCGGG AGGAAGTGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa231819 | |
Clone ID Related Accession (Same CDS sequence) | XM_024986956.1 | |
Accession Version | XM_024986956.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3576bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | liprin-alpha-1 isoform X6 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037356.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATGTGCG AGGTGATGCC GACCATCAGT GAAGCAGAAG GCCCCCCGGG AGGAAGTGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024842724.1 |
CDS | 136..3711 |
Translation |
Target ORF information:
Target ORF information:
|
XM_024986956.1 |
1 | ATGATGTGCG AGGTGATGCC GACCATCAGT GAAGCAGAAG GCCCCCCGGG AGGAAGTGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa231820 | |
Clone ID Related Accession (Same CDS sequence) | XM_024986957.1 | |
Accession Version | XM_024986957.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3279bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | liprin-alpha-1 isoform X7 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037356.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGACGGTGG TCAAGCGGCA GGCACAGTCC CCGGCCGGCG TGTCCAGCGA GGTGGAGGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024842725.1 |
CDS | 248..3526 |
Translation |
Target ORF information:
Target ORF information:
|
XM_024986957.1 |
1 | ATGACGGTGG TCAAGCGGCA GGCACAGTCC CCGGCCGGCG TGTCCAGCGA GGTGGAGGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa231821 | |
Clone ID Related Accession (Same CDS sequence) | XM_024986958.1 | |
Accession Version | XM_024986958.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3189bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | liprin-alpha-1 isoform X8 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037356.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGACGGTGG TCAAGCGGCA GGCACAGTCC CCGGCCGGCG TGTCCAGCGA GGTGGAGGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024842726.1 |
CDS | 253..3441 |
Translation |
Target ORF information:
Target ORF information:
|
XM_024986958.1 |
1 | ATGACGGTGG TCAAGCGGCA GGCACAGTCC CCGGCCGGCG TGTCCAGCGA GGTGGAGGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa231822 | |
Clone ID Related Accession (Same CDS sequence) | XM_024986959.1 | |
Accession Version | XM_024986959.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3774bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | liprin-alpha-1 isoform X9 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037356.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATGTGCG AGGTGATGCC GACCATCAGT GAAGCAGAAG GCCCCCCGGG AGGAAGTGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024842727.1 |
CDS | 136..3909 |
Translation |
Target ORF information:
Target ORF information:
|
XM_024986959.1 |
1 | ATGATGTGCG AGGTGATGCC GACCATCAGT GAAGCAGAAG GCCCCCCGGG AGGAAGTGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa89138 | |
Clone ID Related Accession (Same CDS sequence) | XM_015461323.1 | |
Accession Version | XM_015461323.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3729bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-01-25 | |
Organism | Bos taurus(cattle) | |
Product | liprin-alpha-1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104648.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATGTGCG AGGTGATGCC GACCATCAGT GAAGCAGAAG GCCCCCCGGG AGGAAGTGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015316809.1 |
CDS | 19..3747 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015461323.1 |
1 | ATGATGTGCG AGGTGATGCC GACCATCAGT GAAGCAGAAG GCCCCCCGGG AGGAAGTGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa89139 | |
Clone ID Related Accession (Same CDS sequence) | XM_015461324.1 | |
Accession Version | XM_015461324.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3702bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-01-25 | |
Organism | Bos taurus(cattle) | |
Product | liprin-alpha-1 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104648.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATGTGCG AGGTGATGCC GACCATCAGT GAAGCAGAAG GCCCCCCGGG AGGAAGTGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015316810.1 |
CDS | 18..3719 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015461324.1 |
1 | ATGATGTGCG AGGTGATGCC GACCATCAGT GAAGCAGAAG GCCCCCCGGG AGGAAGTGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa89140 | |
Clone ID Related Accession (Same CDS sequence) | XM_015461325.1 | |
Accession Version | XM_015461325.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3696bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-01-25 | |
Organism | Bos taurus(cattle) | |
Product | liprin-alpha-1 isoform X4 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104648.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATGTGCG AGGTGATGCC GACCATCAGT GAAGCAGAAG GCCCCCCGGG AGGAAGTGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015316811.1 |
CDS | 19..3714 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015461325.1 |
1 | ATGATGTGCG AGGTGATGCC GACCATCAGT GAAGCAGAAG GCCCCCCGGG AGGAAGTGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa89141 | |
Clone ID Related Accession (Same CDS sequence) | XM_015461326.1 | |
Accession Version | XM_015461326.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3639bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-01-25 | |
Organism | Bos taurus(cattle) | |
Product | liprin-alpha-1 isoform X5 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104648.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATGTGCG AGGTGATGCC GACCATCAGT GAAGCAGAAG GCCCCCCGGG AGGAAGTGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015316812.1 |
CDS | 18..3656 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015461326.1 |
1 | ATGATGTGCG AGGTGATGCC GACCATCAGT GAAGCAGAAG GCCCCCCGGG AGGAAGTGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa89142 | |
Clone ID Related Accession (Same CDS sequence) | XM_015461327.1 | |
Accession Version | XM_015461327.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3588bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-01-25 | |
Organism | Bos taurus(cattle) | |
Product | liprin-alpha-1 isoform X6 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104648.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCACCAG GCTCTTCGCA GGGGCTGAGT TTTCAACAGT GCGGGGAATC TGTCTTCCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015316813.1 |
CDS | 634..4221 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015461327.1 |
1 | ATGGCACCAG GCTCTTCGCA GGGGCTGAGT TTTCAACAGT GCGGGGAATC TGTCTTCCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa89143 | |
Clone ID Related Accession (Same CDS sequence) | XM_015461328.1 | |
Accession Version | XM_015461328.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3309bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-01-25 | |
Organism | Bos taurus(cattle) | |
Product | liprin-alpha-1 isoform X7 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104648.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGACGGTGG TCAAGCGGCA GGCACAGTCC CCGGCCGGCG TGTCCAGCGA GGTGGAGGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015316814.1 |
CDS | 987..4295 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015461328.1 |
1 | ATGACGGTGG TCAAGCGGCA GGCACAGTCC CCGGCCGGCG TGTCCAGCGA GGTGGAGGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa01741 | |
Clone ID Related Accession (Same CDS sequence) | NM_001191377.1 | |
Accession Version | NM_001191377.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3609bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2011-10-25 | |
Organism | Bos taurus(Cattle) | |
Product | liprin-alpha-1 | |
Comment | PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AAFC03083525.1 and AAFC03054794.1. On Jul 17, 2010 this sequence version replaced XM_001790603.2. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. |
1 | ATGATGTGCG AGGTGATGCC GACCATCAGT GAAGCAGAAG GCCCCCCGGG AGGAAGTGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001178306.1 |
CDS | 1..3609 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001191377.1 |
1 | ATGATGTGCG AGGTGATGCC GACCATCAGT GAAGCAGAAG GCCCCCCGGG AGGAAGTGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa34958 | |
Clone ID Related Accession (Same CDS sequence) | XM_005227265.3 | |
Accession Version | XM_005227265.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3699bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-01-25 | |
Organism | Bos taurus(cattle) | |
Product | liprin-alpha-1 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104648.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jan 26, 2016 this sequence version replaced XM_005227265.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATGTGCG AGGTGATGCC GACCATCAGT GAAGCAGAAG GCCCCCCGGG AGGAAGTGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005227322.1 |
CDS | 18..3716 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005227265.3 |
1 | ATGATGTGCG AGGTGATGCC GACCATCAGT GAAGCAGAAG GCCCCCCGGG AGGAAGTGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa59015 | |
Clone ID Related Accession (Same CDS sequence) | XM_010821198.2 | |
Accession Version | XM_010821198.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3804bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-01-25 | |
Organism | Bos taurus(cattle) | |
Product | liprin-alpha-1 isoform X8 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104648.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jan 26, 2016 this sequence version replaced XM_010821198.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATGTGCG AGGTGATGCC GACCATCAGT GAAGCAGAAG GCCCCCCGGG AGGAAGTGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_010819500.1 |
CDS | 19..3822 |
Translation |
Target ORF information:
Target ORF information:
|
XM_010821198.2 |
1 | ATGATGTGCG AGGTGATGCC GACCATCAGT GAAGCAGAAG GCCCCCCGGG AGGAAGTGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
A whole-genome assembly of the domestic cow, Bos taurus. |