Gene Symbol | CSN5B |
Entrez Gene ID | 843463 |
Full Name | COP9-signalosome 5B |
Synonyms | AJH2,COP9-signalosome 5B,CSN5,F3I17.12,F3I17_12 |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
ORF » Species Summary » Arabidopsis thaliana » CSN5B cDNA ORF clone
Gene Symbol | CSN5B |
Entrez Gene ID | 843463 |
Full Name | COP9-signalosome 5B |
Synonyms | AJH2,COP9-signalosome 5B,CSN5,F3I17.12,F3I17_12 |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
mRNA | Protein | Name |
---|---|---|
NM_001334491.1 | NP_001321294.1 | COP9-signalosome 5B |
NM_105792.2 | NP_177279.1 | COP9-signalosome 5B |
Homo sapiens (human) | COPS5 | NP_006828.2 |
Bos taurus (cattle) | COPS5 | NP_001179068.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP002880 | XP_312032.5 |
Mus musculus (house mouse) | Cops5 | NP_038743.1 |
Arabidopsis thaliana (thale cress) | CSN5B | NP_177279.1 |
Oryza sativa (rice) | Os04g0654700 | NP_001054112.1 |
Xenopus tropicalis (tropical clawed frog) | cops5 | NP_989109.1 |
Pan troglodytes (chimpanzee) | COPS5 | XP_001162723.1 |
Canis lupus familiaris (dog) | COPS5 | XP_005638087.1 |
Gallus gallus (chicken) | COPS5 | NP_001034400.1 |
Drosophila melanogaster (fruit fly) | CSN5 | NP_477442.1 |
Caenorhabditis elegans (roundworm) | csn-5 | NP_500841.1 |
Magnaporthe oryzae (rice blast fungus) | MGG_05274 | XP_003712833.1 |
Neurospora crassa | NCU00467 | XP_956786.1 |
COPS5 | XP_001097856.1 | |
Rattus norvegicus (Norway rat) | Cops5 | NP_001020866.1 |
Danio rerio (zebrafish) | cops5 | NP_957019.1 |
Arabidopsis thaliana (thale cress) | CSN5A | NP_173705.1 |
Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.
Theologis A, Ecker JR, Palm CJ, Federspiel NA, Kaul S, White O, Alonso J, Altafi H, Araujo R, Bowman CL, Brooks SY, Buehler E, Chan A, Chao Q, Chen H, Cheuk RF, Chin CW, Chung MK, Conn L, Conway AB, Conway AR, Creasy TH, Dewar K, Dunn P, Etgu P, Feldblyum TV, Feng J, Fong B, Fujii CY, Gill JE, Goldsmith AD, Haas B, Hansen NF, Hughes B, Huizar L, Hunter JL, Jenkins J, Johnson-Hopson C, Khan S, Khaykin E, Kim CJ, Koo HL, Kremenetskaia I, Kurtz DB, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee JM, Lenz CA, Li JH, Li Y, Lin X, Liu SX, Liu ZA, Luros JS, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman WC, Osborne BI, Pai G, Peterson J, Pham PK, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg SL, Schwartz JR, Shinn P, Southwick AM, Sun H, Tallon LJ, Tambunga G, Toriumi MJ, Town CD, Utterback T, Van Aken S, Vaysberg M, Vysotskaia VS, Walker M, Wu D, Yu G, Fraser CM, Venter JC, Davis RW
Nature408(6814)816-20(2000 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Data reveal that the 27th amino acid of VTC1 confers a key regulation in the interaction with CSN5B and AsA biosynthesis, as well as in Arabidopsis seedling growth.
Title: D27E mutation of VTC1 impairs the interaction with CSN5B and enhances ascorbic acid biosynthesis and seedling growth in Arabidopsis.
a regulatory role of CSN5B in light-dark regulation of ascorbic acid synthesis
Title: Arabidopsis CSN5B interacts with VTC1 and modulates ascorbic acid synthesis.
not essential for auxin responses
Title: Auxin responses in mutants of the Arabidopsis CONSTITUTIVE PHOTOMORPHOGENIC9 signalosome.
Data suggest that Arabidopsis csn mutants undergo DNA damage, which might be the cause of the delay in G2 cell cycle progression.
Title: The Arabidopsis COP9 signalosome is essential for G2 phase progression and genomic stability.
Results indicate that although CSN6A and CSN6B retain mostly redundant functions, CSN5A and CSN5B play unequal roles in the regulation of plant development.
Title: Role of the MPN subunits in COP9 signalosome assembly and activity, and their regulatory interaction with Arabidopsis Cullin3-based E3 ligases.
The following CSN5B gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CSN5B cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OAb27648 | |
Clone ID Related Accession (Same CDS sequence) | NM_105792.2 | |
Accession Version | NM_105792.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1077bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | COP9-signalosome 5B | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003070). On Sep 12, 2016 this sequence version replaced NM_105792.1. |
1 | ATGGAGGGTT CGTCGTCGAC GATAGCAAGG AAGACATGGG AACTAGAGAA CAGCATTCTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_177279.1 |
CDS | 155..1231 |
Translation |
Target ORF information:
Target ORF information:
|
NM_105792.2 |
1 | ATGGAGGGTT CGTCGTCGAC GATAGCAAGG AAGACATGGG AACTAGAGAA CAGCATTCTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb34825 | |
Clone ID Related Accession (Same CDS sequence) | NM_001334491.1 | |
Accession Version | NM_001334491.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 264bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | COP9-signalosome 5B | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003070). |
1 | ATGGAGGGTT CGTCGTCGAC GATAGCAAGG AAGACATGGG AACTAGAGAA CAGCATTCTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001321294.1 |
CDS | 105..368 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001334491.1 |
1 | ATGGAGGGTT CGTCGTCGAC GATAGCAAGG AAGACATGGG AACTAGAGAA CAGCATTCTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. |