Gene Symbol | RDR1 |
Entrez Gene ID | 838044 |
Full Name | RNA-dependent RNA polymerase 1 |
Synonyms | ATRDRP1,AtRDR1,F10B6.19,F10B6_19,RNA-dependent RNA polymerase 1 |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
ORF » Species Summary » Arabidopsis thaliana » RDR1 cDNA ORF clone
Gene Symbol | RDR1 |
Entrez Gene ID | 838044 |
Full Name | RNA-dependent RNA polymerase 1 |
Synonyms | ATRDRP1,AtRDR1,F10B6.19,F10B6_19,RNA-dependent RNA polymerase 1 |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
mRNA | Protein | Name |
---|---|---|
NM_101348.4 | NP_172932.1 | RNA-dependent RNA polymerase 1 |
Schizosaccharomyces pombe (fission yeast) | rdp1 | NP_593295.1 |
Neurospora crassa | NCU02178 | XP_964248.2 |
Arabidopsis thaliana (thale cress) | RDR1 | NP_172932.1 |
Arabidopsis thaliana (thale cress) | RDR6 | NP_190519.1 |
Oryza sativa (rice) | Os02g0736200 | NP_001048051.1 |
Magnaporthe oryzae (rice blast fungus) | MGG_02748 | XP_003721007.1 |
Arabidopsis thaliana (thale cress) | RDR2 | NP_192851.1 |
Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.
Theologis A, Ecker JR, Palm CJ, Federspiel NA, Kaul S, White O, Alonso J, Altafi H, Araujo R, Bowman CL, Brooks SY, Buehler E, Chan A, Chao Q, Chen H, Cheuk RF, Chin CW, Chung MK, Conn L, Conway AB, Conway AR, Creasy TH, Dewar K, Dunn P, Etgu P, Feldblyum TV, Feng J, Fong B, Fujii CY, Gill JE, Goldsmith AD, Haas B, Hansen NF, Hughes B, Huizar L, Hunter JL, Jenkins J, Johnson-Hopson C, Khan S, Khaykin E, Kim CJ, Koo HL, Kremenetskaia I, Kurtz DB, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee JM, Lenz CA, Li JH, Li Y, Lin X, Liu SX, Liu ZA, Luros JS, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman WC, Osborne BI, Pai G, Peterson J, Pham PK, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg SL, Schwartz JR, Shinn P, Southwick AM, Sun H, Tallon LJ, Tambunga G, Toriumi MJ, Town CD, Utterback T, Van Aken S, Vaysberg M, Vysotskaia VS, Walker M, Wu D, Yu G, Fraser CM, Venter JC, Davis RW
Nature408(6814)816-20(2000 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
AtRDR1-associated pathogen defense is conducted mainly in the plant vascular tissue system and is under complex regulation.
Title: Expressional and regulatory characterization of Arabidopsis RNA-dependent RNA polymerase 1.
In response to Tobacco mosaic virus infection, H2O2 acts downstream of NO to mediate induction of RDR1, which plays a critical role in strengthening RNA silencing to restrict systemic viral infection.
Title: The role of hydrogen peroxide and nitric oxide in the induction of plant-encoded RNA-dependent RNA polymerase 1 in the basal defense against Tobacco mosaic virus.
Components of the RNA-silencing machinery, RNA-DEPENDENT RNA POLYMERASE1 and SUPPRESSOR OF GENE SILENCING3 were isolated, implicating RNA silencing in the control of cuticular wax deposition during inflorescence stem development in Arabidopsis .
Title: RDR1 and SGS3, components of RNA-mediated gene silencing, are required for the regulation of cuticular wax biosynthesis in developing inflorescence stems of Arabidopsis.
The following RDR1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the RDR1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OAb23579 | |
Clone ID Related Accession (Same CDS sequence) | NM_101348.4 | |
Accession Version | NM_101348.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3324bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | RNA-dependent RNA polymerase 1 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003070). On Sep 12, 2016 this sequence version replaced NM_101348.3. |
1 | ATGGGGAAGA CAATTCAAGT GTTTGGATTC CCTAATGGTG TGAGCGCAGA AGAAGTTAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_172932.1 |
CDS | 366..3689 |
Translation |
Target ORF information:
Target ORF information:
|
NM_101348.4 |
1 | ATGGGGAAGA CAATTCAAGT GTTTGGATTC CCTAATGGTG TGAGCGCAGA AGAAGTTAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. |