SDE3 cDNA ORF clone, Arabidopsis thaliana(thale cress)

Gene
Clones
gRNAs

Summary

Gene Symbol	SDE3
Entrez Gene ID	837047
Full Name	P-loop containing nucleoside triphosphate hydrolases superfamily protein
Synonyms	SILENCING DEFECTIVE,T25N20.11,T25N20_11
Gene Type	protein-coding
Organism	Arabidopsis thaliana(thale cress)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001331549.1	NP_001320371.1	P-loop containing nucleoside triphosphate hydrolases superfamily protein
NM_100425.4	NP_172037.1	P-loop containing nucleoside triphosphate hydrolases superfamily protein

Pathways from BioSystems

Homologies

Pan troglodytes (chimpanzee)	MOV10	XP_513630.3
Canis lupus familiaris (dog)	MOV10	XP_540337.3
Bos taurus (cattle)	MOV10	NP_001069307.1
Arabidopsis thaliana (thale cress)	SDE3	NP_172037.1
Rattus norvegicus (Norway rat)	Mov10	NP_001101181.1
	MOV10	XP_001108414.1
Oryza sativa (rice)	Os03g0160400	NP_001049037.1
Xenopus tropicalis (tropical clawed frog)	LOC100494487	XP_002933581.2
Homo sapiens (human)	MOV10	NP_001123551.1
Mus musculus (house mouse)	Mov10	NP_001156912.1
Gallus gallus (chicken)	MOV10	NP_001012861.1
Xenopus tropicalis (tropical clawed frog)	mov10	XP_002932163.1

Gene Ontology
Bibliography

Related articles in PubMed

Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.
Theologis A, Ecker JR, Palm CJ, Federspiel NA, Kaul S, White O, Alonso J, Altafi H, Araujo R, Bowman CL, Brooks SY, Buehler E, Chan A, Chao Q, Chen H, Cheuk RF, Chin CW, Chung MK, Conn L, Conway AB, Conway AR, Creasy TH, Dewar K, Dunn P, Etgu P, Feldblyum TV, Feng J, Fong B, Fujii CY, Gill JE, Goldsmith AD, Haas B, Hansen NF, Hughes B, Huizar L, Hunter JL, Jenkins J, Johnson-Hopson C, Khan S, Khaykin E, Kim CJ, Koo HL, Kremenetskaia I, Kurtz DB, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee JM, Lenz CA, Li JH, Li Y, Lin X, Liu SX, Liu ZA, Luros JS, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman WC, Osborne BI, Pai G, Peterson J, Pham PK, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg SL, Schwartz JR, Shinn P, Southwick AM, Sun H, Tallon LJ, Tambunga G, Toriumi MJ, Town CD, Utterback T, Van Aken S, Vaysberg M, Vysotskaia VS, Walker M, Wu D, Yu G, Fraser CM, Venter JC, Davis RW
Nature408(6814)816-20(2000 Dec)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

SDE3 is present with the PTGS effectors AGO1 and AGO2 in protein complexes with a GW-repeat-containing C-terminal domain. Contribution of RNA-helicase activity and role for AGO binding in SDE3 action, which occurs downstream of RDR6
Title: Ago hook and RNA helicase motifs underpin dual roles for SDE3 in antiviral defense and silencing of nonconserved intergenic regions.

The following SDE3 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the SDE3 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OAb33184	NM_001331549.1 Latest version!	Arabidopsis thaliana P-loop containing nucleoside triphosphate hydrolases superfamily protein (SDE3), partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$510.30 $729.00
OAb22748	NM_100425.4 Latest version!	Arabidopsis thaliana P-loop containing nucleoside triphosphate hydrolases superfamily protein (SDE3), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	TBD	$629.30 $899.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
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2-4 Clone	40% OFF
5 or more Clone	50% OFF
All Other ORF Clones
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*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

SDE3 ( NM_001331549.1 ) cDNA ORF clone, Arabidopsis thaliana(thale cress) -> NP_001320371.1 Arabidopsis thaliana P-loop containing nucleoside triphosphate hydrolases superfamily protein (SDE3), partial mRNA.

Price & Availability↑

CloneID	OAb33184
Clone ID Related Accession (Same CDS sequence)	NM_001331549.1
Accession Version	NM_001331549.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2769bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-02-13
Organism	Arabidopsis thaliana(thale cress)
Product	P-loop containing nucleoside triphosphate hydrolases superfamily protein
Comment	Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003070). COMPLETENESS: incomplete on the 3' end.

ATGAGTGTGA GTGGATACAA ATCGGATGAC GAATATTCTG TAATCGCAGA CAAGGGAGAG 
ATTGGATTTA TAGACTATCA GAATGATGGA TCTTCTGGTT GCTACAATCC ATTTGATGAA 
GGTCCAGTTG TTGTTTCTGT TCCTTTCCCA TTTAAGAAAG AGAAGCCTCA ATCTGTAACT 
GTTGGAGAGA CTTCTTTTGA TTCCTTCACT GTCAAGAACA CTATGGATGA GCCTGTTGAT 
CTCTGGACTA AGATTTACGC ATCTAACCCT GAGGATTCTT TTACTCTCTC GATATTGAAA 
CCGCCTTCGA AAGATTCAGA CTTGAAAGAG AGACAGTGTT TTTATGAAAC TTTTACTCTG 
GAAGATAGGA TGCTTGAGCC TGGTGACACT TTGACCATTT GGGTGTCTTG TAAGCCTAAG 
GACATTGGTT TACATACCAC TGTTGTTACT GTTGACTGGG GAAGTGATAG GGTTGAGCGG 
GTTGTTTTCC TTTTGGCTGA GGATAAGATT TCGAGTTCTC TGACTTCTAA CAGGCCTTAC 
TCTAGAAGTA GAAGGGCTCC GAAGAAAGAT TTTGCTGTGG ATGATTATGT GAAGGGATCA 
CGCCCTTCAA AGGTGGTTGA ACGTAGTTTT AGAAATAGGC TTCCTCTGTA TGAAATTCCA 
AAGGAGATTA GAGAGATGAT CGAGAATAAG GAATTCCCTG ATGATTTGAA CGAAGGTCTT 
ACAGCAAGGA ACTATGCTAA CTACTATAAA ACTTTACTGA TTATGGAAGA ATTACAACTC 
GAGGAAGACA TGCGAGCTTA TGATATGGAG AATGTTTCAA TGAAGAGAAG GGGTATCTAT 
TTGTCCCTCG AAGTTCCTGG CCTTGCTGAG AGAAGACCTT CCCTTGTCCA TGGAGACTTC 
ATCTTTGTTA GACATGCATA TGATGATGGA ACTGACCACG CTTATCAGGG CTTTGTACAC 
CGCGTAGAGG CGGATGAAGT ACATATGAAG TTTGCCTCTG AGTTCCACCA ACGCCACACA 
GCTGGGAGTG TCTATAATGT GAGGTTCACA TACAATCGAA TCAACACTAG AAGGTTGTAT 
CAGGCTGTTG ATGCGGCAGA AATGTTGGAT CCAAACTTCC TTTTCCCATC CTTGCACTCT 
GGGAAAAGGA TGATAAAGAC AAAACCCTTT GTGCCCATTT CACCAGCTCT TAATGCAGAG 
CAGATTTGTT CCATTGAAAT GGTTCTTGGC TGCAAAGGAG CACCACCATA TGTAATCCAT 
GGACCTCCTG GTACTGGGAA AACCATGACA TTGGTGGAGG CTATAGTTCA ACTTTATACA 
ACACAGAGAA ATGCTCGGGT TCTTGTCTGT GCTCCCTCCA ATAGTGCAGC TGATCACATT 
TTAGAGAAAC TCCTTTGTTT AGAGGGAGTT CGCATCAAGG ACAATGAGAT TTTCAGGCTG 
AATGCAGCTA CTCGTTCATA TGAAGAAATT AAGCCTGAGA TTATCCGCTT TTGCTTCTTT 
GATGAGTTAA TTTTCAAGTG CCCCCCTCTC AAAGCTTTGA CTCGTTACAA ACTCGTTGTG 
TCAACATATA TGAGTGCATC GCTTCTTAAC GCGGAAGGTG TAAACCGTGG TCACTTCACT 
CATATTCTCT TAGATGAGGC TGGTCAAGCT TCAGAGCCTG AAAACATGAT TGCTGTATCA 
AATCTCTGCT TGACAGAAAC TGTGGTTGTG CTTGCTGGAG ATCCAAGGCA ATTGGGTCCG 
GTTATATACT CAAGAGATGC TGAGTCACTC GGCTTGGGGA AGTCATACTT GGAAAGATTG 
TTTGAGTGTG ATTATTACTG CGAAGGGGAT GAGAATTATG TAACAAAGCT AGTCAAGAAC 
TACAGATGCC ACCCAGAGAT TCTTGATCTC CCGTCAAAGC TCTTCTATGA TGGAGAACTG 
GTAGCTTCCA AAGAAGACAC AGACTCTGTT CTTGCCTCGT TAAACTTCCT TCCAAACAAA 
GAATTTCCGA TGGTTTTCTA TGGGATCCAA GGATGCGATG AGAGGGAAGG TAACAATCCG 
TCCTGGTTCA ACCGTATAGA GATCAGCAAA GTTATAGAGA CAATCAAGAG ATTAACAGCG 
AATGACTGTG TGCAAGAAGA GGATATCGGA GTTATAACTC CTTACAGGCA GCAAGTAATG 
AAGATCAAGG AGGTTCTTGA CAGGTTAGAT ATGACTGAAG TCAAAGTTGG TAGTGTAGAG 
CAATTCCAAG GTCAAGAGAA ACAGGTCATC ATCATTTCAA CTGTAAGATC TACTATCAAA 
CACAACGAGT TCGATAGAGC CTATTGTCTG GGCTTCCTGA GCAATCCAAG GAGGTTTAAT 
GTCGCCATAA CCCGTGCAAT CTCTCTGCTA GTGATCATCG GAAACCCACA TATCATATGC 
AAGGACATGA ACTGGAACAA GCTTTTGTGG CGATGTGTGG ATAACAATGC TTACCAAGGA 
TGCGGTTTAC CAGAGCAGGA GGAGTTTGTG GAGGAACCAT TCAAGCAAGA AGGAAGCAGC 
AATGGGCCTC AATACCCTCC AGAAGCTGAG TGGAACAACA GTGGAGAGCT CAACAATGGT 
GGTGCGAATG AGAATGGTGA ATGGTCTGAT GGGTGGAACA ACAATGGCGG AAAAAATGAA 
AAAGAAGAAT GTTGTGATGG TTGGAAAGAC GGCGGCAGTG GTGAAGAGAT CAAGAATGGT 
GGTAAGTTTG AAACCAGAGG TGATTTTGTA GCCAAGGAAG AAGATGAGTG GTCTGATGGG 
TGGAAGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001320371.1
CDS	158..2926
Translation	MSVSGYKSDDEYSVIADKGEIGFIDYQNDGSSGCYNPFDEGPVVVSVPFPFKKEKPQSVTVGETSFDSFTVKNTMDEPVDLWTKIYASNPEDSFTLSILKPPSKDSDLKERQCFYETFTLEDRMLEPGDTLTIWVSCKPKDIGLHTTVVTVDWGSDRVERVVFLLAEDKISSSLTSNRPYSRSRRAPKKDFAVDDYVKGSRPSKVVERSFRNRLPLYEIPKEIREMIENKEFPDDLNEGLTARNYANYYKTLLIMEELQLEEDMRAYDMENVSMKRRGIYLSLEVPGLAERRPSLVHGDFIFVRHAYDDGTDHAYQGFVHRVEADEVHMKFASEFHQRHTAGSVYNVRFTYNRINTRRLYQAVDAAEMLDPNFLFPSLHSGKRMIKTKPFVPISPALNAEQICSIEMVLGCKGAPPYVIHGPPGTGKTMTLVEAIVQLYTTQRNARVLVCAPSNSAADHILEKLLCLEGVRIKDNEIFRLNAATRSYEEIKPEIIRFCFFDELIFKCPPLKALTRYKLVVSTYMSASLLNAEGVNRGHFTHILLDEAGQASEPENMIAVSNLCLTETVVVLAGDPRQLGPVIYSRDAESLGLGKSYLERLFECDYYCEGDENYVTKLVKNYRCHPEILDLPSKLFYDGELVASKEDTDSVLASLNFLPNKEFPMVFYGIQGCDEREGNNPSWFNRIEISKVIETIKRLTANDCVQEEDIGVITPYRQQVMKIKEVLDRLDMTEVKVGSVEQFQGQEKQVIIISTVRSTIKHNEFDRAYCLGFLSNPRRFNVAITRAISLLVIIGNPHIICKDMNWNKLLWRCVDNNAYQGCGLPEQEEFVEEPFKQEGSSNGPQYPPEAEWNNSGELNNGGANENGEWSDGWNNNGGKNEKEECCDGWKDGGSGEEIKNGGKFETRGDFVAKEEDEWSDGWK

Target ORF information:

RefSeq Version	NM_001331549.1
Organism	Arabidopsis thaliana(thale cress)
Definition	Arabidopsis thaliana P-loop containing nucleoside triphosphate hydrolases superfamily protein (SDE3), partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001331549.1

ORF Insert Sequence:

ATGAGTGTGA GTGGATACAA ATCGGATGAC GAATATTCTG TAATCGCAGA CAAGGGAGAG 
ATTGGATTTA TAGACTATCA GAATGATGGA TCTTCTGGTT GCTACAATCC ATTTGATGAA 
GGTCCAGTTG TTGTTTCTGT TCCTTTCCCA TTTAAGAAAG AGAAGCCTCA ATCTGTAACT 
GTTGGAGAGA CTTCTTTTGA TTCCTTCACT GTCAAGAACA CTATGGATGA GCCTGTTGAT 
CTCTGGACTA AGATTTACGC ATCTAACCCT GAGGATTCTT TTACTCTCTC GATATTGAAA 
CCGCCTTCGA AAGATTCAGA CTTGAAAGAG AGACAGTGTT TTTATGAAAC TTTTACTCTG 
GAAGATAGGA TGCTTGAGCC TGGTGACACT TTGACCATTT GGGTGTCTTG TAAGCCTAAG 
GACATTGGTT TACATACCAC TGTTGTTACT GTTGACTGGG GAAGTGATAG GGTTGAGCGG 
GTTGTTTTCC TTTTGGCTGA GGATAAGATT TCGAGTTCTC TGACTTCTAA CAGGCCTTAC 
TCTAGAAGTA GAAGGGCTCC GAAGAAAGAT TTTGCTGTGG ATGATTATGT GAAGGGATCA 
CGCCCTTCAA AGGTGGTTGA ACGTAGTTTT AGAAATAGGC TTCCTCTGTA TGAAATTCCA 
AAGGAGATTA GAGAGATGAT CGAGAATAAG GAATTCCCTG ATGATTTGAA CGAAGGTCTT 
ACAGCAAGGA ACTATGCTAA CTACTATAAA ACTTTACTGA TTATGGAAGA ATTACAACTC 
GAGGAAGACA TGCGAGCTTA TGATATGGAG AATGTTTCAA TGAAGAGAAG GGGTATCTAT 
TTGTCCCTCG AAGTTCCTGG CCTTGCTGAG AGAAGACCTT CCCTTGTCCA TGGAGACTTC 
ATCTTTGTTA GACATGCATA TGATGATGGA ACTGACCACG CTTATCAGGG CTTTGTACAC 
CGCGTAGAGG CGGATGAAGT ACATATGAAG TTTGCCTCTG AGTTCCACCA ACGCCACACA 
GCTGGGAGTG TCTATAATGT GAGGTTCACA TACAATCGAA TCAACACTAG AAGGTTGTAT 
CAGGCTGTTG ATGCGGCAGA AATGTTGGAT CCAAACTTCC TTTTCCCATC CTTGCACTCT 
GGGAAAAGGA TGATAAAGAC AAAACCCTTT GTGCCCATTT CACCAGCTCT TAATGCAGAG 
CAGATTTGTT CCATTGAAAT GGTTCTTGGC TGCAAAGGAG CACCACCATA TGTAATCCAT 
GGACCTCCTG GTACTGGGAA AACCATGACA TTGGTGGAGG CTATAGTTCA ACTTTATACA 
ACACAGAGAA ATGCTCGGGT TCTTGTCTGT GCTCCCTCCA ATAGTGCAGC TGATCACATT 
TTAGAGAAAC TCCTTTGTTT AGAGGGAGTT CGCATCAAGG ACAATGAGAT TTTCAGGCTG 
AATGCAGCTA CTCGTTCATA TGAAGAAATT AAGCCTGAGA TTATCCGCTT TTGCTTCTTT 
GATGAGTTAA TTTTCAAGTG CCCCCCTCTC AAAGCTTTGA CTCGTTACAA ACTCGTTGTG 
TCAACATATA TGAGTGCATC GCTTCTTAAC GCGGAAGGTG TAAACCGTGG TCACTTCACT 
CATATTCTCT TAGATGAGGC TGGTCAAGCT TCAGAGCCTG AAAACATGAT TGCTGTATCA 
AATCTCTGCT TGACAGAAAC TGTGGTTGTG CTTGCTGGAG ATCCAAGGCA ATTGGGTCCG 
GTTATATACT CAAGAGATGC TGAGTCACTC GGCTTGGGGA AGTCATACTT GGAAAGATTG 
TTTGAGTGTG ATTATTACTG CGAAGGGGAT GAGAATTATG TAACAAAGCT AGTCAAGAAC 
TACAGATGCC ACCCAGAGAT TCTTGATCTC CCGTCAAAGC TCTTCTATGA TGGAGAACTG 
GTAGCTTCCA AAGAAGACAC AGACTCTGTT CTTGCCTCGT TAAACTTCCT TCCAAACAAA 
GAATTTCCGA TGGTTTTCTA TGGGATCCAA GGATGCGATG AGAGGGAAGG TAACAATCCG 
TCCTGGTTCA ACCGTATAGA GATCAGCAAA GTTATAGAGA CAATCAAGAG ATTAACAGCG 
AATGACTGTG TGCAAGAAGA GGATATCGGA GTTATAACTC CTTACAGGCA GCAAGTAATG 
AAGATCAAGG AGGTTCTTGA CAGGTTAGAT ATGACTGAAG TCAAAGTTGG TAGTGTAGAG 
CAATTCCAAG GTCAAGAGAA ACAGGTCATC ATCATTTCAA CTGTAAGATC TACTATCAAA 
CACAACGAGT TCGATAGAGC CTATTGTCTG GGCTTCCTGA GCAATCCAAG GAGGTTTAAT 
GTCGCCATAA CCCGTGCAAT CTCTCTGCTA GTGATCATCG GAAACCCACA TATCATATGC 
AAGGACATGA ACTGGAACAA GCTTTTGTGG CGATGTGTGG ATAACAATGC TTACCAAGGA 
TGCGGTTTAC CAGAGCAGGA GGAGTTTGTG GAGGAACCAT TCAAGCAAGA AGGAAGCAGC 
AATGGGCCTC AATACCCTCC AGAAGCTGAG TGGAACAACA GTGGAGAGCT CAACAATGGT 
GGTGCGAATG AGAATGGTGA ATGGTCTGAT GGGTGGAACA ACAATGGCGG AAAAAATGAA 
AAAGAAGAAT GTTGTGATGG TTGGAAAGAC GGCGGCAGTG GTGAAGAGAT CAAGAATGGT 
GGTAAGTTTG AAACCAGAGG TGATTTTGTA GCCAAGGAAG AAGATGAGTG GTCTGATGGG 
TGGAAGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

SDE3 ( NM_100425.4 ) cDNA ORF clone, Arabidopsis thaliana(thale cress) -> NP_172037.1 Arabidopsis thaliana P-loop containing nucleoside triphosphate hydrolases superfamily protein (SDE3), mRNA.

Price & Availability↑

CloneID	OAb22748
Clone ID Related Accession (Same CDS sequence)	NM_100425.4
Accession Version	NM_100425.4 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3009bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-02-13
Organism	Arabidopsis thaliana(thale cress)
Product	P-loop containing nucleoside triphosphate hydrolases superfamily protein
Comment	Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003070). On Sep 12, 2016 this sequence version replaced NM_100425.3.

ATGAGTGTGA GTGGATACAA ATCGGATGAC GAATATTCTG TAATCGCAGA CAAGGGAGAG 
ATTGGATTTA TAGACTATCA GAATGATGGA TCTTCTGGTT GCTACAATCC ATTTGATGAA 
GGTCCAGTTG TTGTTTCTGT TCCTTTCCCA TTTAAGAAAG AGAAGCCTCA ATCTGTAACT 
GTTGGAGAGA CTTCTTTTGA TTCCTTCACT GTCAAGAACA CTATGGATGA GCCTGTTGAT 
CTCTGGACTA AGATTTACGC ATCTAACCCT GAGGATTCTT TTACTCTCTC GATATTGAAA 
CCGCCTTCGA AAGATTCAGA CTTGAAAGAG AGACAGTGTT TTTATGAAAC TTTTACTCTG 
GAAGATAGGA TGCTTGAGCC TGGTGACACT TTGACCATTT GGGTGTCTTG TAAGCCTAAG 
GACATTGGTT TACATACCAC TGTTGTTACT GTTGACTGGG GAAGTGATAG GGTTGAGCGG 
GTTGTTTTCC TTTTGGCTGA GGATAAGATT TCGAGTTCTC TGACTTCTAA CAGGCCTTAC 
TCTAGAAGTA GAAGGGCTCC GAAGAAAGAT TTTGCTGTGG ATGATTATGT GAAGGGATCA 
CGCCCTTCAA AGGTGGTTGA ACGTAGTTTT AGAAATAGGC TTCCTCTGTA TGAAATTCCA 
AAGGAGATTA GAGAGATGAT CGAGAATAAG GAATTCCCTG ATGATTTGAA CGAAGGTCTT 
ACAGCAAGGA ACTATGCTAA CTACTATAAA ACTTTACTGA TTATGGAAGA ATTACAACTC 
GAGGAAGACA TGCGAGCTTA TGATATGGAG AATGTTTCAA TGAAGAGAAG GGGTATCTAT 
TTGTCCCTCG AAGTTCCTGG CCTTGCTGAG AGAAGACCTT CCCTTGTCCA TGGAGACTTC 
ATCTTTGTTA GACATGCATA TGATGATGGA ACTGACCACG CTTATCAGGG CTTTGTACAC 
CGCGTAGAGG CGGATGAAGT ACATATGAAG TTTGCCTCTG AGTTCCACCA ACGCCACACA 
GCTGGGAGTG TCTATAATGT GAGGTTCACA TACAATCGAA TCAACACTAG AAGGTTGTAT 
CAGGCTGTTG ATGCGGCAGA AATGTTGGAT CCAAACTTCC TTTTCCCATC CTTGCACTCT 
GGGAAAAGGA TGATAAAGAC AAAACCCTTT GTGCCCATTT CACCAGCTCT TAATGCAGAG 
CAGATTTGTT CCATTGAAAT GGTTCTTGGC TGCAAAGGAG CACCACCATA TGTAATCCAT 
GGACCTCCTG GTACTGGGAA AACCATGACA TTGGTGGAGG CTATAGTTCA ACTTTATACA 
ACACAGAGAA ATGCTCGGGT TCTTGTCTGT GCTCCCTCCA ATAGTGCAGC TGATCACATT 
TTAGAGAAAC TCCTTTGTTT AGAGGGAGTT CGCATCAAGG ACAATGAGAT TTTCAGGCTG 
AATGCAGCTA CTCGTTCATA TGAAGAAATT AAGCCTGAGA TTATCCGCTT TTGCTTCTTT 
GATGAGTTAA TTTTCAAGTG CCCCCCTCTC AAAGCTTTGA CTCGTTACAA ACTCGTTGTG 
TCAACATATA TGAGTGCATC GCTTCTTAAC GCGGAAGGTG TAAACCGTGG TCACTTCACT 
CATATTCTCT TAGATGAGGC TGGTCAAGCT TCAGAGCCTG AAAACATGAT TGCTGTATCA 
AATCTCTGCT TGACAGAAAC TGTGGTTGTG CTTGCTGGAG ATCCAAGGCA ATTGGGTCCG 
GTTATATACT CAAGAGATGC TGAGTCACTC GGCTTGGGGA AGTCATACTT GGAAAGATTG 
TTTGAGTGTG ATTATTACTG CGAAGGGGAT GAGAATTATG TAACAAAGCT AGTCAAGAAC 
TACAGATGCC ACCCAGAGAT TCTTGATCTC CCGTCAAAGC TCTTCTATGA TGGAGAACTG 
GTAGCTTCCA AAGAAGACAC AGACTCTGTT CTTGCCTCGT TAAACTTCCT TCCAAACAAA 
GAATTTCCGA TGGTTTTCTA TGGGATCCAA GGATGCGATG AGAGGGAAGG TAACAATCCG 
TCCTGGTTCA ACCGTATAGA GATCAGCAAA GTTATAGAGA CAATCAAGAG ATTAACAGCG 
AATGACTGTG TGCAAGAAGA GGATATCGGA GTTATAACTC CTTACAGGCA GCAAGTAATG 
AAGATCAAGG AGGTTCTTGA CAGGTTAGAT ATGACTGAAG TCAAAGTTGG TAGTGTAGAG 
CAATTCCAAG GTCAAGAGAA ACAGGTCATC ATCATTTCAA CTGTAAGATC TACTATCAAA 
CACAACGAGT TCGATAGAGC CTATTGTCTG GGCTTCCTGA GCAATCCAAG GAGGTTTAAT 
GTCGCCATAA CCCGTGCAAT CTCTCTGCTA GTGATCATCG GAAACCCACA TATCATATGC 
AAGGACATGA ACTGGAACAA GCTTTTGTGG CGATGTGTGG ATAACAATGC TTACCAAGGA 
TGCGGTTTAC CAGAGCAGGA GGAGTTTGTG GAGGAACCAT TCAAGCAAGA AGGAAGCAGC 
AATGGGCCTC AATACCCTCC AGAAGCTGAG TGGAACAACA GTGGAGAGCT CAACAATGGT 
GGTGCGAATG AGAATGGTGA ATGGTCTGAT GGGTGGAACA ACAATGGCGG CACAAAGGAA 
AAAAATGAAT GGTCTGATGG ATGGAACAGC AATGGTGGTG GGACAAAGAA GAAAGATGAA 
TGGTCTGATG GGTGGGACAA CAATGGCGGC ACAAACGGGA TCAATCAAGA AGGAAGCAGC 
AACGCTCCCC AAGACCCTCA AGAAGCCGAG TGGAACGATA GTGGCGAGGT CAAGAATGGT 
GGCACAAAGG AGAAAGATGT CAGGTCTGAT GGGTGGAACA ACAATGGCGG AAAAAATGAA 
AAAGAAGAAT GTTGTGATGG TTGGAAAGAC GGCGGCAGTG GTGAAGAGAT CAAGAATGGT 
GGTAAGTTTG AAACCAGAGG TGATTTTGTA GCCAAGGAAG AAGATGAGTG GTCTGATGGG 
TGGAAGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_172037.1
CDS	165..3173
Translation	MSVSGYKSDDEYSVIADKGEIGFIDYQNDGSSGCYNPFDEGPVVVSVPFPFKKEKPQSVTVGETSFDSFTVKNTMDEPVDLWTKIYASNPEDSFTLSILKPPSKDSDLKERQCFYETFTLEDRMLEPGDTLTIWVSCKPKDIGLHTTVVTVDWGSDRVERVVFLLAEDKISSSLTSNRPYSRSRRAPKKDFAVDDYVKGSRPSKVVERSFRNRLPLYEIPKEIREMIENKEFPDDLNEGLTARNYANYYKTLLIMEELQLEEDMRAYDMENVSMKRRGIYLSLEVPGLAERRPSLVHGDFIFVRHAYDDGTDHAYQGFVHRVEADEVHMKFASEFHQRHTAGSVYNVRFTYNRINTRRLYQAVDAAEMLDPNFLFPSLHSGKRMIKTKPFVPISPALNAEQICSIEMVLGCKGAPPYVIHGPPGTGKTMTLVEAIVQLYTTQRNARVLVCAPSNSAADHILEKLLCLEGVRIKDNEIFRLNAATRSYEEIKPEIIRFCFFDELIFKCPPLKALTRYKLVVSTYMSASLLNAEGVNRGHFTHILLDEAGQASEPENMIAVSNLCLTETVVVLAGDPRQLGPVIYSRDAESLGLGKSYLERLFECDYYCEGDENYVTKLVKNYRCHPEILDLPSKLFYDGELVASKEDTDSVLASLNFLPNKEFPMVFYGIQGCDEREGNNPSWFNRIEISKVIETIKRLTANDCVQEEDIGVITPYRQQVMKIKEVLDRLDMTEVKVGSVEQFQGQEKQVIIISTVRSTIKHNEFDRAYCLGFLSNPRRFNVAITRAISLLVIIGNPHIICKDMNWNKLLWRCVDNNAYQGCGLPEQEEFVEEPFKQEGSSNGPQYPPEAEWNNSGELNNGGANENGEWSDGWNNNGGTKEKNEWSDGWNSNGGGTKKKDEWSDGWDNNGGTNGINQEGSSNAPQDPQEAEWNDSGEVKNGGTKEKDVRSDGWNNNGGKNEKEECCDGWKDGGSGEEIKNGGKFETRGDFVAKEEDEWSDGWK

Target ORF information:

RefSeq Version	NM_100425.4
Organism	Arabidopsis thaliana(thale cress)
Definition	Arabidopsis thaliana P-loop containing nucleoside triphosphate hydrolases superfamily protein (SDE3), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_100425.4

ORF Insert Sequence:

ATGAGTGTGA GTGGATACAA ATCGGATGAC GAATATTCTG TAATCGCAGA CAAGGGAGAG 
ATTGGATTTA TAGACTATCA GAATGATGGA TCTTCTGGTT GCTACAATCC ATTTGATGAA 
GGTCCAGTTG TTGTTTCTGT TCCTTTCCCA TTTAAGAAAG AGAAGCCTCA ATCTGTAACT 
GTTGGAGAGA CTTCTTTTGA TTCCTTCACT GTCAAGAACA CTATGGATGA GCCTGTTGAT 
CTCTGGACTA AGATTTACGC ATCTAACCCT GAGGATTCTT TTACTCTCTC GATATTGAAA 
CCGCCTTCGA AAGATTCAGA CTTGAAAGAG AGACAGTGTT TTTATGAAAC TTTTACTCTG 
GAAGATAGGA TGCTTGAGCC TGGTGACACT TTGACCATTT GGGTGTCTTG TAAGCCTAAG 
GACATTGGTT TACATACCAC TGTTGTTACT GTTGACTGGG GAAGTGATAG GGTTGAGCGG 
GTTGTTTTCC TTTTGGCTGA GGATAAGATT TCGAGTTCTC TGACTTCTAA CAGGCCTTAC 
TCTAGAAGTA GAAGGGCTCC GAAGAAAGAT TTTGCTGTGG ATGATTATGT GAAGGGATCA 
CGCCCTTCAA AGGTGGTTGA ACGTAGTTTT AGAAATAGGC TTCCTCTGTA TGAAATTCCA 
AAGGAGATTA GAGAGATGAT CGAGAATAAG GAATTCCCTG ATGATTTGAA CGAAGGTCTT 
ACAGCAAGGA ACTATGCTAA CTACTATAAA ACTTTACTGA TTATGGAAGA ATTACAACTC 
GAGGAAGACA TGCGAGCTTA TGATATGGAG AATGTTTCAA TGAAGAGAAG GGGTATCTAT 
TTGTCCCTCG AAGTTCCTGG CCTTGCTGAG AGAAGACCTT CCCTTGTCCA TGGAGACTTC 
ATCTTTGTTA GACATGCATA TGATGATGGA ACTGACCACG CTTATCAGGG CTTTGTACAC 
CGCGTAGAGG CGGATGAAGT ACATATGAAG TTTGCCTCTG AGTTCCACCA ACGCCACACA 
GCTGGGAGTG TCTATAATGT GAGGTTCACA TACAATCGAA TCAACACTAG AAGGTTGTAT 
CAGGCTGTTG ATGCGGCAGA AATGTTGGAT CCAAACTTCC TTTTCCCATC CTTGCACTCT 
GGGAAAAGGA TGATAAAGAC AAAACCCTTT GTGCCCATTT CACCAGCTCT TAATGCAGAG 
CAGATTTGTT CCATTGAAAT GGTTCTTGGC TGCAAAGGAG CACCACCATA TGTAATCCAT 
GGACCTCCTG GTACTGGGAA AACCATGACA TTGGTGGAGG CTATAGTTCA ACTTTATACA 
ACACAGAGAA ATGCTCGGGT TCTTGTCTGT GCTCCCTCCA ATAGTGCAGC TGATCACATT 
TTAGAGAAAC TCCTTTGTTT AGAGGGAGTT CGCATCAAGG ACAATGAGAT TTTCAGGCTG 
AATGCAGCTA CTCGTTCATA TGAAGAAATT AAGCCTGAGA TTATCCGCTT TTGCTTCTTT 
GATGAGTTAA TTTTCAAGTG CCCCCCTCTC AAAGCTTTGA CTCGTTACAA ACTCGTTGTG 
TCAACATATA TGAGTGCATC GCTTCTTAAC GCGGAAGGTG TAAACCGTGG TCACTTCACT 
CATATTCTCT TAGATGAGGC TGGTCAAGCT TCAGAGCCTG AAAACATGAT TGCTGTATCA 
AATCTCTGCT TGACAGAAAC TGTGGTTGTG CTTGCTGGAG ATCCAAGGCA ATTGGGTCCG 
GTTATATACT CAAGAGATGC TGAGTCACTC GGCTTGGGGA AGTCATACTT GGAAAGATTG 
TTTGAGTGTG ATTATTACTG CGAAGGGGAT GAGAATTATG TAACAAAGCT AGTCAAGAAC 
TACAGATGCC ACCCAGAGAT TCTTGATCTC CCGTCAAAGC TCTTCTATGA TGGAGAACTG 
GTAGCTTCCA AAGAAGACAC AGACTCTGTT CTTGCCTCGT TAAACTTCCT TCCAAACAAA 
GAATTTCCGA TGGTTTTCTA TGGGATCCAA GGATGCGATG AGAGGGAAGG TAACAATCCG 
TCCTGGTTCA ACCGTATAGA GATCAGCAAA GTTATAGAGA CAATCAAGAG ATTAACAGCG 
AATGACTGTG TGCAAGAAGA GGATATCGGA GTTATAACTC CTTACAGGCA GCAAGTAATG 
AAGATCAAGG AGGTTCTTGA CAGGTTAGAT ATGACTGAAG TCAAAGTTGG TAGTGTAGAG 
CAATTCCAAG GTCAAGAGAA ACAGGTCATC ATCATTTCAA CTGTAAGATC TACTATCAAA 
CACAACGAGT TCGATAGAGC CTATTGTCTG GGCTTCCTGA GCAATCCAAG GAGGTTTAAT 
GTCGCCATAA CCCGTGCAAT CTCTCTGCTA GTGATCATCG GAAACCCACA TATCATATGC 
AAGGACATGA ACTGGAACAA GCTTTTGTGG CGATGTGTGG ATAACAATGC TTACCAAGGA 
TGCGGTTTAC CAGAGCAGGA GGAGTTTGTG GAGGAACCAT TCAAGCAAGA AGGAAGCAGC 
AATGGGCCTC AATACCCTCC AGAAGCTGAG TGGAACAACA GTGGAGAGCT CAACAATGGT 
GGTGCGAATG AGAATGGTGA ATGGTCTGAT GGGTGGAACA ACAATGGCGG CACAAAGGAA 
AAAAATGAAT GGTCTGATGG ATGGAACAGC AATGGTGGTG GGACAAAGAA GAAAGATGAA 
TGGTCTGATG GGTGGGACAA CAATGGCGGC ACAAACGGGA TCAATCAAGA AGGAAGCAGC 
AACGCTCCCC AAGACCCTCA AGAAGCCGAG TGGAACGATA GTGGCGAGGT CAAGAATGGT 
GGCACAAAGG AGAAAGATGT CAGGTCTGAT GGGTGGAACA ACAATGGCGG AAAAAATGAA 
AAAGAAGAAT GTTGTGATGG TTGGAAAGAC GGCGGCAGTG GTGAAGAGAT CAAGAATGGT 
GGTAAGTTTG AAACCAGAGG TGATTTTGTA GCCAAGGAAG AAGATGAGTG GTCTGATGGG 
TGGAAGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.
Nature408(6814)816-20(2000 Dec)
Theologis A,Ecker JR,Palm CJ,Federspiel NA,Kaul S,White O,Alonso J,Altafi H,Araujo R,Bowman CL,Brooks SY,Buehler E,Chan A,Chao Q,Chen H,Cheuk RF,Chin CW,Chung MK,Conn L,Conway AB,Conway AR,Creasy TH,Dewar K,Dunn P,Etgu P,Feldblyum TV,Feng J,Fong B,Fujii CY,Gill JE,Goldsmith AD,Haas B,Hansen NF,Hughes B,Huizar L,Hunter JL,Jenkins J,Johnson-Hopson C,Khan S,Khaykin E,Kim CJ,Koo HL,Kremenetskaia I,Kurtz DB,Kwan A,Lam B,Langin-Hooper S,Lee A,Lee JM,Lenz CA,Li JH,Li Y,Lin X,Liu SX,Liu ZA,Luros JS,Maiti R,Marziali A,Militscher J,Miranda M,Nguyen M,Nierman WC,Osborne BI,Pai G,Peterson J,Pham PK,Rizzo M,Rooney T,Rowley D,Sakano H,Salzberg SL,Schwartz JR,Shinn P,Southwick AM,Sun H,Tallon LJ,Tambunga G,Toriumi MJ,Town CD,Utterback T,Van Aken S,Vaysberg M,Vysotskaia VS,Walker M,Wu D,Yu G,Fraser CM,Venter JC,Davis RW

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SDE3 cDNA ORF clone, Arabidopsis thaliana(thale cress)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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