ORF » Species Summary » Arabidopsis thaliana » AT5G58980 cDNA ORF clone

AT5G58980 cDNA ORF clone, Arabidopsis thaliana(thale cress)

The following AT5G58980 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the AT5G58980 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OAb21853 NM_125288.4
Latest version!		 Arabidopsis thaliana Neutral/alkaline non-lysosomal ceramidase (AT5G58980), partial mRNA. pcDNA3.1-C-(k)DYK or customized vector 12-14 $426.30
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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    AT5G58980 ( NM_125288.4 ) cDNA ORF clone, Arabidopsis thaliana(thale cress) -> NP_200706.1 Arabidopsis thaliana Neutral/alkaline non-lysosomal ceramidase (AT5G58980), partial mRNA.
    Price & Availability↑
    CloneID OAb21853
    Clone ID Related Accession (Same CDS sequence) NM_125288.4
    Accession Version NM_125288.4 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 2202bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2019-02-13
    Organism Arabidopsis thaliana(thale cress)
    Product Neutral/alkaline non-lysosomal ceramidase
    Comment Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003076). On Jun 19, 2009 this sequence version replaced NM_125288.3. COMPLETENESS: incomplete on the 3' end. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    ATGACGAGGT GGTCTATGTC TATGCACTGC ACATTGTTCT TGCTATTTCT GTTGAGGCTC 
    ACTTGTATAT TCTCAGATTC CGATTATTTG ATGGGTCTTG GAAGCTATGA CATCACAGGA 
    CCTGCAGCTG ATGTTAACAT GATGGGTTAT GCTAACATGG AACAAGTAGC ATCTGGTGTT 
    CACTTCAGGC TCAGAGCTCG TGCGTTCATC GTGGCTGAGC CATACAAGAA AAGGATTGCT 
    TTTGTTAATC TTGATGCTGG TATGGCCTCA CAGCTTGTGA CCATCAAAGT GATTGAAAGA 
    TTGAAACAGA GGTACGGTGA GCTTTATACG GAGGAAAATG TTGCAATTAG TGGAACTCAT 
    ACTCATGCTG GTCCAGGGGG TTATCTCCAA TACATTTTGT ACTTAGTTAC ATCTCTCGGG 
    TTTGTTCATC AATCTTTCAA TGCTCTTGTG GACGGTATAG AGCAAAGTAT TATACAAGCT 
    CATGAAAATC TTCGTCCCGG GTCCATTTTA ATCAACAAAG GGGAGCTCTT GGATGCTGGT 
    GTGAACCGTA GTCCCAGTGC TTACCTTAAC AATCCGGCAC ATGAACGTAG TAAATATGAA 
    TATGATGTAG ATAAAGAGAT GACACTTGTC AAATTCGTTG ATGATCAATG GGGTCCAGTG 
    GCACGTATCA TGGAAGACTG GTTTGAACGA GAAAACGGTT GTAGATCAGT TGATGTTGAA 
    TCTCCTAGAA GAGTCTCAAG CATAATCAGT GATCCTTATG ATCAAGATTT GATGGAAATG 
    GCATCCTCGT TACTGTCTAC CGGCGGTAAA ACCGTTACAA GGATGTCAAG CGTTGCTAGA 
    CGGGTCAGAA GTAGATTTAG ACACGCTGAC AAACCTAGAT TTGTCTCTGC CTTCTGTCAA 
    ACTAACTGCG GTGATGTTAG TCCGAATGTG TTGGGAGCCT TCTGTATAGA CACAGGCCTT 
    CCTTGTGAAT TCAACCAAAG TACTTGTGGT GGAAAGAATG AGCAATGCTA CGGCCGTGGA 
    CCAGGCTACC CTGATGAATT TGAGAGTACC CGCATTATTG GAGAGAGGCA GTTCAAGAAG 
    GCTGCGGATC TTTTCACTAA AGCCTCTGAG GAGATACAAG GAAAAGTTGA CTATCGTCAT 
    GCATATGTTG ATTTCTCTCA GCTTGAAGTG ACGATTAATG GACAAAATGG AGGTTCCGAA 
    GTGGTGAAAA CATGTCCAGC TGCAATGGGT TTTGGTTTCG CTGCAGGAAC AACTGATGGA 
    CCTGGAGCAT TTGACTTTAA ACAAGGAGAT GATCAGGGAA ATCCTTTCTG GAGGCTTGTA 
    AGGAACCTTC TCAAGAATCC AACTGAGGAA CAAGTACGAT GCCAACGACC TAAACCCATA 
    TTGCTTGATA CCGGTGAAAT GAAACAACCA TACGACTGGG CGCCGTCGAT ATTACCAGTT 
    CAGATCCTCC GCATTGGCCA GCTAGTGATT CTCTGCGTCC CCGGAGAATT CACAACAATG 
    GCAGGGAGGC GACTACGTGA TGCCGTGAAA ACAGTGCTTA AAGAAGGCAG CAATGGAAGA 
    GAATTCAGCG TGGTAATAGC CGGGCTAACC AATTCGTATT CGCAGTATAT TGCCACATTT 
    GAGGAATACC AAGTTCAGAG ATATGAGGGT GCATCGACTT TGTATGGACC TCACACGCTA 
    AGCGGATACA TTCAAGAATT CAAGAAACTA GCAAATGATC TTCTATCTGC TCAAACCACT 
    GACCCGGGTC CCCAACCACC TGACTTACTT CACAAGCAAA TAAGCTTACT AACACCTGTT 
    GTTGCGGATA TGACACCAAT TGGAACTGCA TTCGGAGATG TTACATCGGA TGTTCCTCGG 
    TTATCCAAAT TCAGGAAGGG AGCTGACATA GTGAGGGTTC AATTCCGGTC AGCTAACCCG 
    AGAAACGATC TGATGACGGA AGGAACTTTC GCGCTTGTTG AGAGGTGGCT CGAAGGAAGA 
    GAGACATGGG TACCTGTTTA TGATGATGAT GACTTTTGCC TCCGGTTTAA GTGGTCAAGA 
    CCGTTTAAAC TCAGCACGCA GAGCACAGCA ACTATCGAAT GGAGAATCCC TGAAACCGCA 
    TCACCTGGTG TTTATAGAAT CACTCACTTT GGTTCAGCTA AAACTCCTAT AAGCTCCATT 
    CACCATTTCT CTGGTTCATC TAGTGCCTTT GTTGTATATT GA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq NP_200706.1
    CDS203..2404
    Translation

    Target ORF information:

    RefSeq Version NM_125288.4
    Organism Arabidopsis thaliana(thale cress)
    Definition Arabidopsis thaliana Neutral/alkaline non-lysosomal ceramidase (AT5G58980), partial mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 NM_125288.4

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    ATGACGAGGT GGTCTATGTC TATGCACTGC ACATTGTTCT TGCTATTTCT GTTGAGGCTC 
    ACTTGTATAT TCTCAGATTC CGATTATTTG ATGGGTCTTG GAAGCTATGA CATCACAGGA 
    CCTGCAGCTG ATGTTAACAT GATGGGTTAT GCTAACATGG AACAAGTAGC ATCTGGTGTT 
    CACTTCAGGC TCAGAGCTCG TGCGTTCATC GTGGCTGAGC CATACAAGAA AAGGATTGCT 
    TTTGTTAATC TTGATGCTGG TATGGCCTCA CAGCTTGTGA CCATCAAAGT GATTGAAAGA 
    TTGAAACAGA GGTACGGTGA GCTTTATACG GAGGAAAATG TTGCAATTAG TGGAACTCAT 
    ACTCATGCTG GTCCAGGGGG TTATCTCCAA TACATTTTGT ACTTAGTTAC ATCTCTCGGG 
    TTTGTTCATC AATCTTTCAA TGCTCTTGTG GACGGTATAG AGCAAAGTAT TATACAAGCT 
    CATGAAAATC TTCGTCCCGG GTCCATTTTA ATCAACAAAG GGGAGCTCTT GGATGCTGGT 
    GTGAACCGTA GTCCCAGTGC TTACCTTAAC AATCCGGCAC ATGAACGTAG TAAATATGAA 
    TATGATGTAG ATAAAGAGAT GACACTTGTC AAATTCGTTG ATGATCAATG GGGTCCAGTG 
    GCACGTATCA TGGAAGACTG GTTTGAACGA GAAAACGGTT GTAGATCAGT TGATGTTGAA 
    TCTCCTAGAA GAGTCTCAAG CATAATCAGT GATCCTTATG ATCAAGATTT GATGGAAATG 
    GCATCCTCGT TACTGTCTAC CGGCGGTAAA ACCGTTACAA GGATGTCAAG CGTTGCTAGA 
    CGGGTCAGAA GTAGATTTAG ACACGCTGAC AAACCTAGAT TTGTCTCTGC CTTCTGTCAA 
    ACTAACTGCG GTGATGTTAG TCCGAATGTG TTGGGAGCCT TCTGTATAGA CACAGGCCTT 
    CCTTGTGAAT TCAACCAAAG TACTTGTGGT GGAAAGAATG AGCAATGCTA CGGCCGTGGA 
    CCAGGCTACC CTGATGAATT TGAGAGTACC CGCATTATTG GAGAGAGGCA GTTCAAGAAG 
    GCTGCGGATC TTTTCACTAA AGCCTCTGAG GAGATACAAG GAAAAGTTGA CTATCGTCAT 
    GCATATGTTG ATTTCTCTCA GCTTGAAGTG ACGATTAATG GACAAAATGG AGGTTCCGAA 
    GTGGTGAAAA CATGTCCAGC TGCAATGGGT TTTGGTTTCG CTGCAGGAAC AACTGATGGA 
    CCTGGAGCAT TTGACTTTAA ACAAGGAGAT GATCAGGGAA ATCCTTTCTG GAGGCTTGTA 
    AGGAACCTTC TCAAGAATCC AACTGAGGAA CAAGTACGAT GCCAACGACC TAAACCCATA 
    TTGCTTGATA CCGGTGAAAT GAAACAACCA TACGACTGGG CGCCGTCGAT ATTACCAGTT 
    CAGATCCTCC GCATTGGCCA GCTAGTGATT CTCTGCGTCC CCGGAGAATT CACAACAATG 
    GCAGGGAGGC GACTACGTGA TGCCGTGAAA ACAGTGCTTA AAGAAGGCAG CAATGGAAGA 
    GAATTCAGCG TGGTAATAGC CGGGCTAACC AATTCGTATT CGCAGTATAT TGCCACATTT 
    GAGGAATACC AAGTTCAGAG ATATGAGGGT GCATCGACTT TGTATGGACC TCACACGCTA 
    AGCGGATACA TTCAAGAATT CAAGAAACTA GCAAATGATC TTCTATCTGC TCAAACCACT 
    GACCCGGGTC CCCAACCACC TGACTTACTT CACAAGCAAA TAAGCTTACT AACACCTGTT 
    GTTGCGGATA TGACACCAAT TGGAACTGCA TTCGGAGATG TTACATCGGA TGTTCCTCGG 
    TTATCCAAAT TCAGGAAGGG AGCTGACATA GTGAGGGTTC AATTCCGGTC AGCTAACCCG 
    AGAAACGATC TGATGACGGA AGGAACTTTC GCGCTTGTTG AGAGGTGGCT CGAAGGAAGA 
    GAGACATGGG TACCTGTTTA TGATGATGAT GACTTTTGCC TCCGGTTTAA GTGGTCAAGA 
    CCGTTTAAAC TCAGCACGCA GAGCACAGCA ACTATCGAAT GGAGAATCCC TGAAACCGCA 
    TCACCTGGTG TTTATAGAAT CACTCACTTT GGTTCAGCTA AAACTCCTAT AAGCTCCATT 
    CACCATTTCT CTGGTTCATC TAGTGCCTTT GTTGTATATT GA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.
    Nature408(6814)823-6(2000 Dec)
    Tabata S,Kaneko T,Nakamura Y,Kotani H,Kato T,Asamizu E,Miyajima N,Sasamoto S,Kimura T,Hosouchi T,Kawashima K,Kohara M,Matsumoto M,Matsuno A,Muraki A,Nakayama S,Nakazaki N,Naruo K,Okumura S,Shinpo S,Takeuchi C,Wada T,Watanabe A,Yamada M,Yasuda M,Sato S,de la Bastide M,Huang E,Spiegel L,Gnoj L,O'Shaughnessy A,Preston R,Habermann K,Murray J,Johnson D,Rohlfing T,Nelson J,Stoneking T,Pepin K,Spieth J,Sekhon M,Armstrong J,Becker M,Belter E,Cordum H,Cordes M,Courtney L,Courtney W,Dante M,Du H,Edwards J,Fryman J,Haakensen B,Lamar E,Latreille P,Leonard S,Meyer R,Mulvaney E,Ozersky P,Riley A,Strowmatt C,Wagner-McPherson C,Wollam A,Yoakum M,Bell M,Dedhia N,Parnell L,Shah R,Rodriguez M,See LH,Vil D,Baker J,Kirchoff K,Toth K,King L,Bahret A,Miller B,Marra M,Martienssen R,McCombie WR,Wilson RK,Murphy G,Bancroft I,Volckaert G,Wambutt R,D?sterh?ft A,Stiekema W,Pohl T,Entian KD,Terryn N,Hartley N,Bent E,Johnson S,Langham SA,McCullagh B,Robben J,Grymonprez B,Zimmermann W,Ramsperger U,Wedler H,Balke K,Wedler E,Peters S,van Staveren M,Dirkse W,Mooijman P,Lankhorst RK,Weitzenegger T,Bothe G,Rose M,Hauf J,Berneiser S,Hempel S,Feldpausch M,Lamberth S,Villarroel R,Gielen J,Ardiles W,Bents O,Lemcke K,Kolesov G,Mayer K,Rudd S,Schoof H,Schueller C,Zaccaria P,Mewes HW,Bevan M,Fransz P,,,


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