Gene Symbol | SYP41 |
Entrez Gene ID | 832756 |
Full Name | syntaxin of plants 41 |
Synonyms | ATSYP41,ATTLG2A,F2P16.16,F2P16_16,syntaxin of plants 41 |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
ORF » Species Summary » Arabidopsis thaliana » SYP41 cDNA ORF clone
Gene Symbol | SYP41 |
Entrez Gene ID | 832756 |
Full Name | syntaxin of plants 41 |
Synonyms | ATSYP41,ATTLG2A,F2P16.16,F2P16_16,syntaxin of plants 41 |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
mRNA | Protein | Name |
---|---|---|
NM_001343989.1 | NP_001331924.1 | syntaxin of plants 41 |
NM_122580.4 | NP_198050.1 | syntaxin of plants 41 |
NM_001036873.2 | NP_001031950.1 | syntaxin of plants 41 |
STX16 | XP_002798124.1 | |
Bos taurus (cattle) | STX16 | XP_002692463.1 |
Danio rerio (zebrafish) | stx16 | XP_691316.2 |
Caenorhabditis elegans (roundworm) | syn-16 | NP_498105.1 |
Saccharomyces cerevisiae (baker's yeast) | TLG2 | NP_014624.1 |
Homo sapiens (human) | STX16 | NP_001001433.1 |
Canis lupus familiaris (dog) | STX16 | XP_005635285.1 |
Mus musculus (house mouse) | Stx16 | NP_766263.2 |
Arabidopsis thaliana (thale cress) | SYP42 | NP_567223.1 |
Drosophila melanogaster (fruit fly) | Syx16 | NP_523420.1 |
Magnaporthe oryzae (rice blast fungus) | MGG_06883 | XP_003709612.1 |
Pan troglodytes (chimpanzee) | STX16 | XP_514749.2 |
Rattus norvegicus (Norway rat) | Stx16 | NP_001102080.1 |
Gallus gallus (chicken) | STX16 | NP_001006295.1 |
Eremothecium gossypii | AGOS_AEL026C | NP_984835.2 |
Arabidopsis thaliana (thale cress) | SYP41 | NP_001031950.1 |
Xenopus tropicalis (tropical clawed frog) | LOC100493473 | XP_002943756.2 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP000850 | XP_316820.5 |
Kluyveromyces lactis | KLLA0A10681g | XP_451467.1 |
Schizosaccharomyces pombe (fission yeast) | tlg2 | NP_593832.1 |
Neurospora crassa | NCU04119 | XP_961275.2 |
Arabidopsis thaliana (thale cress) | SYP43 | NP_566256.1 |
Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.
Tabata S, Kaneko T, Nakamura Y, Kotani H, Kato T, Asamizu E, Miyajima N, Sasamoto S, Kimura T, Hosouchi T, Kawashima K, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Naruo K, Okumura S, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Sato S, de la Bastide M, Huang E, Spiegel L, Gnoj L, O'Shaughnessy A, Preston R, Habermann K, Murray J, Johnson D, Rohlfing T, Nelson J, Stoneking T, Pepin K, Spieth J, Sekhon M, Armstrong J, Becker M, Belter E, Cordum H, Cordes M, Courtney L, Courtney W, Dante M, Du H, Edwards J, Fryman J, Haakensen B, Lamar E, Latreille P, Leonard S, Meyer R, Mulvaney E, Ozersky P, Riley A, Strowmatt C, Wagner-McPherson C, Wollam A, Yoakum M, Bell M, Dedhia N, Parnell L, Shah R, Rodriguez M, See LH, Vil D, Baker J, Kirchoff K, Toth K, King L, Bahret A, Miller B, Marra M, Martienssen R, McCombie WR, Wilson RK, Murphy G, Bancroft I, Volckaert G, Wambutt R, D?sterh?ft A, Stiekema W, Pohl T, Entian KD, Terryn N, Hartley N, Bent E, Johnson S, Langham SA, McCullagh B, Robben J, Grymonprez B, Zimmermann W, Ramsperger U, Wedler H, Balke K, Wedler E, Peters S, van Staveren M, Dirkse W, Mooijman P, Lankhorst RK, Weitzenegger T, Bothe G, Rose M, Hauf J, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Villarroel R, Gielen J, Ardiles W, Bents O, Lemcke K, Kolesov G, Mayer K, Rudd S, Schoof H, Schueller C, Zaccaria P, Mewes HW, Bevan M, Fransz P, , ,
Nature408(6814)823-6(2000 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
A functional characterization of AtVPS45 (for vacuolar protein sorting 45), a protein from the Sec1/Munc18 family in Arabidopsis (Arabidopsis thaliana) that interacts at the trans-Golgi network (TGN) with the SYP41/SYP61/VTI12 SNARE complex, is reported.
Title: AtVPS45 is a positive regulator of the SYP41/SYP61/VTI12 SNARE complex involved in trafficking of vacuolar cargo.
The following SYP41 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the SYP41 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OAb19629 | |
Clone ID Related Accession (Same CDS sequence) | NM_001343989.1 , NM_122580.4 , NM_001036873.2 | |
Accession Version | NM_001343989.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 969bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | syntaxin of plants 41 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003076). |
1 | ATGGCGACGA GGAATCGTAC GTTGCTGTTT AGGAAGTACA GAAACTCTCT GAGAAGCGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001331924.1 |
CDS | 228..1196 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001343989.1 |
1 | ATGGCGACGA GGAATCGTAC GTTGCTGTTT AGGAAGTACA GAAACTCTCT GAGAAGCGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb19629 | |
Clone ID Related Accession (Same CDS sequence) | NM_001343989.1 , NM_122580.4 , NM_001036873.2 | |
Accession Version | NM_122580.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 969bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | syntaxin of plants 41 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003076). On Sep 12, 2016 this sequence version replaced NM_122580.3. |
1 | ATGGCGACGA GGAATCGTAC GTTGCTGTTT AGGAAGTACA GAAACTCTCT GAGAAGCGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_198050.1 |
CDS | 489..1457 |
Translation |
Target ORF information:
Target ORF information:
|
NM_122580.4 |
1 | ATGGCGACGA GGAATCGTAC GTTGCTGTTT AGGAAGTACA GAAACTCTCT GAGAAGCGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb19629 | |
Clone ID Related Accession (Same CDS sequence) | NM_001343989.1 , NM_122580.4 , NM_001036873.2 | |
Accession Version | NM_001036873.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 969bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | syntaxin of plants 41 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003076). On Sep 12, 2016 this sequence version replaced NM_001036873.1. |
1 | ATGGCGACGA GGAATCGTAC GTTGCTGTTT AGGAAGTACA GAAACTCTCT GAGAAGCGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001031950.1 |
CDS | 489..1457 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001036873.2 |
1 | ATGGCGACGA GGAATCGTAC GTTGCTGTTT AGGAAGTACA GAAACTCTCT GAGAAGCGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. |