Gene Symbol | LCB2 |
Entrez Gene ID | 832432 |
Full Name | long chain base2 |
Synonyms | MQM1.6,MQM1_6,SERINE PALMITOYLTRANSFERASE,long chain base2 |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
ORF » Species Summary » Arabidopsis thaliana » LCB2 cDNA ORF clone
Gene Symbol | LCB2 |
Entrez Gene ID | 832432 |
Full Name | long chain base2 |
Synonyms | MQM1.6,MQM1_6,SERINE PALMITOYLTRANSFERASE,long chain base2 |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
mRNA | Protein | Name |
---|---|---|
NM_001036855.1 | NP_001031932.1 | long chain base2 |
NM_122272.3 | NP_197756.1 | long chain base2 |
Pan troglodytes (chimpanzee) | SPTLC2 | XP_510095.3 |
Caenorhabditis elegans (roundworm) | sptl-2 | NP_505065.1 |
Magnaporthe oryzae (rice blast fungus) | MGG_05197 | XP_003712740.1 |
Homo sapiens (human) | SPTLC2 | NP_004854.1 |
Rattus norvegicus (Norway rat) | Sptlc2 | NP_001032174.1 |
Gallus gallus (chicken) | SPTLC2 | NP_001006483.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP007941 | XP_317536.4 |
Schizosaccharomyces pombe (fission yeast) | lcb2 | XP_001713103.1 |
Arabidopsis thaliana (thale cress) | LCB2 | NP_197756.1 |
Oryza sativa (rice) | Os01g0928700 | NP_001045278.1 |
Oryza sativa (rice) | Os01g0928800 | NP_001045279.1 |
Mus musculus (house mouse) | Sptlc2 | NP_035609.1 |
Kluyveromyces lactis | KLLA0D02134g | XP_453163.1 |
Oryza sativa (rice) | Os11g0516000 | NP_001067972.1 |
Danio rerio (zebrafish) | sptlc2a | NP_001018455.1 |
Saccharomyces cerevisiae (baker's yeast) | LCB2 | NP_010347.1 |
Neurospora crassa | NCU00447 | XP_956766.1 |
LOC707625 | XP_001096042.2 | |
Canis lupus familiaris (dog) | SPTLC2 | XP_537524.3 |
Bos taurus (cattle) | SPTLC2 | NP_001092551.1 |
Drosophila melanogaster (fruit fly) | lace | NP_476614.1 |
Eremothecium gossypii | AGOS_AGR127C | NP_986793.2 |
Arabidopsis thaliana (thale cress) | SPT1 | NP_190447.1 |
Xenopus tropicalis (tropical clawed frog) | sptlc2 | XP_002938915.1 |
Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.
Tabata S, Kaneko T, Nakamura Y, Kotani H, Kato T, Asamizu E, Miyajima N, Sasamoto S, Kimura T, Hosouchi T, Kawashima K, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Naruo K, Okumura S, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Sato S, de la Bastide M, Huang E, Spiegel L, Gnoj L, O'Shaughnessy A, Preston R, Habermann K, Murray J, Johnson D, Rohlfing T, Nelson J, Stoneking T, Pepin K, Spieth J, Sekhon M, Armstrong J, Becker M, Belter E, Cordum H, Cordes M, Courtney L, Courtney W, Dante M, Du H, Edwards J, Fryman J, Haakensen B, Lamar E, Latreille P, Leonard S, Meyer R, Mulvaney E, Ozersky P, Riley A, Strowmatt C, Wagner-McPherson C, Wollam A, Yoakum M, Bell M, Dedhia N, Parnell L, Shah R, Rodriguez M, See LH, Vil D, Baker J, Kirchoff K, Toth K, King L, Bahret A, Miller B, Marra M, Martienssen R, McCombie WR, Wilson RK, Murphy G, Bancroft I, Volckaert G, Wambutt R, D?sterh?ft A, Stiekema W, Pohl T, Entian KD, Terryn N, Hartley N, Bent E, Johnson S, Langham SA, McCullagh B, Robben J, Grymonprez B, Zimmermann W, Ramsperger U, Wedler H, Balke K, Wedler E, Peters S, van Staveren M, Dirkse W, Mooijman P, Lankhorst RK, Weitzenegger T, Bothe G, Rose M, Hauf J, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Villarroel R, Gielen J, Ardiles W, Bents O, Lemcke K, Kolesov G, Mayer K, Rudd S, Schoof H, Schueller C, Zaccaria P, Mewes HW, Bevan M, Fransz P, , ,
Nature408(6814)823-6(2000 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The roles of the LCB2a and LCB2b subunits in sphingolipid biosyntesis in A. thaliana were studied.
Title: Loss-of-function mutations and inducible RNAi suppression of Arabidopsis LCB2 genes reveal the critical role of sphingolipids in gametophytic and sporophytic cell viability.
T-DNA insertions in two homologous LCB2 genes showed a phenotype similar to fumonisin B(1) resistant11-2 mutant, an allele of lcb1-1.
Title: Serine palmitoyltransferase, a key enzyme for de novo synthesis of sphingolipids, is essential for male gametophyte development in Arabidopsis.
The following LCB2 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LCB2 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OAb19355 | |
Clone ID Related Accession (Same CDS sequence) | NM_001036855.1 , NM_122272.3 | |
Accession Version | NM_001036855.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1470bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | long chain base2 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003076). |
1 | ATGATAACGA TTCCTTATTT AACCGCTGTA TCCACCTACT TCAGCTATGG ATTGCTCTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001031932.1 |
CDS | 233..1702 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001036855.1 |
1 | ATGATAACGA TTCCTTATTT AACCGCTGTA TCCACCTACT TCAGCTATGG ATTGCTCTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb19355 | |
Clone ID Related Accession (Same CDS sequence) | NM_001036855.1 , NM_122272.3 | |
Accession Version | NM_122272.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1470bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | long chain base2 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003076). On Apr 18, 2007 this sequence version replaced NM_122272.2. |
1 | ATGATAACGA TTCCTTATTT AACCGCTGTA TCCACCTACT TCAGCTATGG ATTGCTCTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_197756.1 |
CDS | 249..1718 |
Translation |
Target ORF information:
Target ORF information:
|
NM_122272.3 |
1 | ATGATAACGA TTCCTTATTT AACCGCTGTA TCCACCTACT TCAGCTATGG ATTGCTCTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. |