Gene Symbol | CHR23 |
Entrez Gene ID | 832051 |
Full Name | homeotic protein regulator |
Synonyms | AtCHR23,F7K24.60,F7K24_60,chromatin remodeling 23 |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
ORF » Species Summary » Arabidopsis thaliana » CHR23 cDNA ORF clone
Gene Symbol | CHR23 |
Entrez Gene ID | 832051 |
Full Name | homeotic protein regulator |
Synonyms | AtCHR23,F7K24.60,F7K24_60,chromatin remodeling 23 |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
mRNA | Protein | Name |
---|---|---|
NM_001343595.1 | NP_001330405.1 | homeotic protein regulator |
NM_121936.3 | NP_197432.2 | homeotic protein regulator |
Mus musculus (house mouse) | Smarca2 | NP_035546.2 |
Rattus norvegicus (Norway rat) | Smarca2 | NP_001004446.1 |
Saccharomyces cerevisiae (baker's yeast) | STH1 | NP_012140.1 |
Schizosaccharomyces pombe (fission yeast) | snf22 | NP_588472.2 |
Gallus gallus (chicken) | SMARCA2 | NP_990470.1 |
Arabidopsis thaliana (thale cress) | AT5G19310 | NP_197432.2 |
Arabidopsis thaliana (thale cress) | ATCHR12 | NP_187252.2 |
Canis lupus familiaris (dog) | SMARCA2 | XP_850159.1 |
Danio rerio (zebrafish) | smarca2 | NP_001038240.1 |
Eremothecium gossypii | AGOS_AER375C | NP_985231.1 |
Schizosaccharomyces pombe (fission yeast) | snf21 | NP_594861.1 |
Magnaporthe oryzae (rice blast fungus) | MGG_06388 | XP_003717185.1 |
Neurospora crassa | NCU06488 | XP_957128.1 |
Xenopus tropicalis (tropical clawed frog) | smarca2 | XP_004910846.1 |
Homo sapiens (human) | SMARCA2 | NP_001276325.1 |
Bos taurus (cattle) | SMARCA2 | NP_001092585.1 |
Drosophila melanogaster (fruit fly) | brm | NP_730089.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP010462 | XP_311484.3 |
Pan troglodytes (chimpanzee) | SMARCA2 | XP_003951484.1 |
Caenorhabditis elegans (roundworm) | swsn-4 | NP_502082.1 |
Kluyveromyces lactis | KLLA0F04521g | XP_455284.1 |
Oryza sativa (rice) | Os05g0144300 | NP_001054624.1 |
Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.
Tabata S, Kaneko T, Nakamura Y, Kotani H, Kato T, Asamizu E, Miyajima N, Sasamoto S, Kimura T, Hosouchi T, Kawashima K, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Naruo K, Okumura S, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Sato S, de la Bastide M, Huang E, Spiegel L, Gnoj L, O'Shaughnessy A, Preston R, Habermann K, Murray J, Johnson D, Rohlfing T, Nelson J, Stoneking T, Pepin K, Spieth J, Sekhon M, Armstrong J, Becker M, Belter E, Cordum H, Cordes M, Courtney L, Courtney W, Dante M, Du H, Edwards J, Fryman J, Haakensen B, Lamar E, Latreille P, Leonard S, Meyer R, Mulvaney E, Ozersky P, Riley A, Strowmatt C, Wagner-McPherson C, Wollam A, Yoakum M, Bell M, Dedhia N, Parnell L, Shah R, Rodriguez M, See LH, Vil D, Baker J, Kirchoff K, Toth K, King L, Bahret A, Miller B, Marra M, Martienssen R, McCombie WR, Wilson RK, Murphy G, Bancroft I, Volckaert G, Wambutt R, D?sterh?ft A, Stiekema W, Pohl T, Entian KD, Terryn N, Hartley N, Bent E, Johnson S, Langham SA, McCullagh B, Robben J, Grymonprez B, Zimmermann W, Ramsperger U, Wedler H, Balke K, Wedler E, Peters S, van Staveren M, Dirkse W, Mooijman P, Lankhorst RK, Weitzenegger T, Bothe G, Rose M, Hauf J, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Villarroel R, Gielen J, Ardiles W, Bents O, Lemcke K, Kolesov G, Mayer K, Rudd S, Schoof H, Schueller C, Zaccaria P, Mewes HW, Bevan M, Fransz P, , ,
Nature408(6814)823-6(2000 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Repression of AtCHR12/23 gene expression in germinating wild-type Arabidopsis seeds is required for full germination.[AtCHR23]
Title: Reduced seed germination in Arabidopsis over-expressing SWI/SNF2 ATPase genes.
ATCHR23-mediated chromatin remodeling is a potential component of a buffer system in plants that protects against environmentally-induced phenotypic and transcriptional variation.[AtCHR23]
Title: Over-expression of Arabidopsis AtCHR23 chromatin remodeling ATPase results in increased variability of growth and gene expression.
The chr12 chr23 double mutants cause embryonic lethality. The double mutant embryos fail to initiate root and shoot meristems, and display few and aberrant cell divisions.
Title: Mutations in two non-canonical Arabidopsis SWI2/SNF2 chromatin remodeling ATPases cause embryogenesis and stem cell maintenance defects.
The following CHR23 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CHR23 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OAb41027 | |
Clone ID Related Accession (Same CDS sequence) | NM_001343595.1 | |
Accession Version | NM_001343595.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2403bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | homeotic protein regulator | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003076). |
1 | ATGGCCCTTA AATCTGATGA TCAAGAGGAA TACATGAAAC TAGCAAAGGA AAGTAAGAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001330405.1 |
CDS | 229..2631 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001343595.1 |
1 | ATGGCCCTTA AATCTGATGA TCAAGAGGAA TACATGAAAC TAGCAAAGGA AAGTAAGAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb19022 | |
Clone ID Related Accession (Same CDS sequence) | NM_121936.3 | |
Accession Version | NM_121936.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3195bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | homeotic protein regulator | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003076). On Sep 12, 2016 this sequence version replaced NM_121936.2. |
1 | ATGGTGAAGC AGCTACAAGA GCAGGAGGAG AACGATCCCG TCGAGAAGAC AAAGTCTCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_197432.2 |
CDS | 164..3358 |
Translation |
Target ORF information:
Target ORF information:
|
NM_121936.3 |
1 | ATGGTGAAGC AGCTACAAGA GCAGGAGGAG AACGATCCCG TCGAGAAGAC AAAGTCTCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. |