Gene Symbol | AT3G59950 |
Entrez Gene ID | 825165 |
Full Name | Peptidase family C54 protein |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
ORF » Species Summary » Arabidopsis thaliana » AT3G59950 cDNA ORF clone
Gene Symbol | AT3G59950 |
Entrez Gene ID | 825165 |
Full Name | Peptidase family C54 protein |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
mRNA | Protein | Name |
---|---|---|
NM_001340007.1 | NP_001325932.1 | Peptidase family C54 protein |
NM_180391.4 | NP_850722.3 | Peptidase family C54 protein |
NM_001340006.1 | NP_001325933.1 | Peptidase family C54 protein |
NM_001125387.1 | NP_001118859.1 | Peptidase family C54 protein |
NM_115858.6 | NP_191554.1 | Peptidase family C54 protein |
Gallus gallus (chicken) | ATG4A | NP_001258915.1 |
Danio rerio (zebrafish) | atg4a | NP_001019605.1 |
Drosophila melanogaster (fruit fly) | Atg4 | NP_608563.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP008497 | XP_316946.4 |
Caenorhabditis elegans (roundworm) | atg-4.1 | NP_493375.2 |
Homo sapiens (human) | ATG4A | NP_443168.2 |
Pan troglodytes (chimpanzee) | ATG4A | NP_001233457.1 |
ATG4A | XP_001097251.1 | |
Oryza sativa (rice) | Os04g0682000 | NP_001054293.1 |
Bos taurus (cattle) | ATG4A | NP_001001171.1 |
Rattus norvegicus (Norway rat) | Atg4al1 | NP_001119770.1 |
Saccharomyces cerevisiae (baker's yeast) | ATG4 | NP_014176.2 |
Kluyveromyces lactis | KLLA0D19536g | XP_453929.1 |
Eremothecium gossypii | AGOS_ABL191W | NP_982756.1 |
Arabidopsis thaliana (thale cress) | AT2G44140 | NP_850412.1 |
Arabidopsis thaliana (thale cress) | AT3G59950 | NP_191554.1 |
Xenopus tropicalis (tropical clawed frog) | atg4a | NP_001016619.1 |
Canis lupus familiaris (dog) | ATG4A | XP_538136.3 |
Mus musculus (house mouse) | Atg4a | NP_777364.3 |
Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.
Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl?cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell LA, Mache R, Puigdom?nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu?tier F, Sch?fer M, M?ller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L?hnert TH, Nordsiek G, Reichelt J, Scharfe M, Sch?n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw?lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse AC, Alcaraz JP, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes HW, Mayer KF, Kaul S, Town CD, Koo HL, Tallon LJ, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii CY, Shea TP, Creasy TH, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill JE, Feldblyum TV, Preuss D, Lin X, Nierman WC, Salzberg SL, White O, Venter JC, Fraser CM, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,
Nature408(6814)820-2(2000 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
AtATG4a is catalytically more active and has broad AtATG8 substrate specificity compared with AtATG4b. [ATG4b]
Title: Arabidopsis ATG4 cysteine proteases specificity toward ATG8 substrates.
These results support the conclusion that CML24 affects autophagy progression through interactions with ATG4.
Title: Calmodulin-related CML24 interacts with ATG4b and affects autophagy progression in Arabidopsis.
The following AT3G59950 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the AT3G59950 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OAb13959 | |
Clone ID Related Accession (Same CDS sequence) | NM_180391.4 | |
Accession Version | NM_180391.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1083bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | Peptidase family C54 protein | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003074). On Apr 18, 2007 this sequence version replaced NM_180391.3. |
1 | ATGAAGGCTA TATGTGATAG ATTTGTTCCT TCAAAATGTT CTTCATCAAG CACAAGTGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_850722.3 |
CDS | 284..1366 |
Translation |
Target ORF information:
Target ORF information:
|
NM_180391.4 |
1 | ATGAAGGCTA TATGTGATAG ATTTGTTCCT TCAAAATGTT CTTCATCAAG CACAAGTGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb13960 | |
Clone ID Related Accession (Same CDS sequence) | NM_115858.6 | |
Accession Version | NM_115858.6 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1434bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | Peptidase family C54 protein | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003074). On Apr 18, 2007 this sequence version replaced NM_115858.5. |
1 | ATGAAGGCTA TATGTGATAG ATTTGTTCCT TCAAAATGTT CTTCATCAAG CACAAGTGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_191554.1 |
CDS | 284..1717 |
Translation |
Target ORF information:
Target ORF information:
|
NM_115858.6 |
1 | ATGAAGGCTA TATGTGATAG ATTTGTTCCT TCAAAATGTT CTTCATCAAG CACAAGTGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb13961 | |
Clone ID Related Accession (Same CDS sequence) | NM_001125387.1 | |
Accession Version | NM_001125387.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 804bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | Peptidase family C54 protein | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003074). |
1 | ATGGCTAGCG GGGCAATTAG GAGATTTCAA GACCGTGTAT TAGGGCCGAG TAGGACGGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001118859.1 |
CDS | 414..1217 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001125387.1 |
1 | ATGGCTAGCG GGGCAATTAG GAGATTTCAA GACCGTGTAT TAGGGCCGAG TAGGACGGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb38505 | |
Clone ID Related Accession (Same CDS sequence) | NM_001340007.1 | |
Accession Version | NM_001340007.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1182bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | Peptidase family C54 protein | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003074). COMPLETENESS: incomplete on the 3' end. |
1 | ATGAAGGCTA TATGTGATAG ATTTGTTCCT TCAAAATGTT CTTCATCAAG CACAAGTGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001325932.1 |
CDS | 305..1486 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001340007.1 |
1 | ATGAAGGCTA TATGTGATAG ATTTGTTCCT TCAAAATGTT CTTCATCAAG CACAAGTGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb38506 | |
Clone ID Related Accession (Same CDS sequence) | NM_001340006.1 | |
Accession Version | NM_001340006.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1176bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | Peptidase family C54 protein | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003074). COMPLETENESS: incomplete on the 3' end. |
1 | ATGGCTAGCG GGGCAATTAG GAGATTTCAA GACCGTGTAT TAGGGCCGAG TAGGACGGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001325933.1 |
CDS | 448..1623 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001340006.1 |
1 | ATGGCTAGCG GGGCAATTAG GAGATTTCAA GACCGTGTAT TAGGGCCGAG TAGGACGGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. |