Gene Symbol | PREP1 |
Entrez Gene ID | 821451 |
Full Name | presequence protease 1 |
Synonyms | ATPREP1,ATZNMP,presequence protease 1 |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
ORF » Species Summary » Arabidopsis thaliana » PREP1 cDNA ORF clone
Gene Symbol | PREP1 |
Entrez Gene ID | 821451 |
Full Name | presequence protease 1 |
Synonyms | ATPREP1,ATZNMP,presequence protease 1 |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
mRNA | Protein | Name |
---|---|---|
NM_112804.5 | NP_188548.2 | presequence protease 1 |
NM_001203003.1 | NP_001189932.1 | presequence protease 1 |
Pan troglodytes (chimpanzee) | PITRM1 | XP_001140483.1 |
Schizosaccharomyces pombe (fission yeast) | SPBC119.17 | NP_595299.2 |
Magnaporthe oryzae (rice blast fungus) | MGG_02440 | XP_003709229.1 |
Neurospora crassa | NCU01272 | XP_960750.1 |
Arabidopsis thaliana (thale cress) | PREP1 | NP_188548.2 |
Bos taurus (cattle) | PITRM1 | XP_002692237.2 |
Gallus gallus (chicken) | PITRM1 | XP_418564.2 |
Arabidopsis thaliana (thale cress) | PREP2 | NP_850962.1 |
Homo sapiens (human) | PITRM1 | NP_055704.2 |
Canis lupus familiaris (dog) | PITRM1 | XP_535200.2 |
Rattus norvegicus (Norway rat) | Pitrm1 | NP_001100833.1 |
PITRM1 | XP_001102165.1 | |
Drosophila melanogaster (fruit fly) | CG3107 | NP_001036470.1 |
Mus musculus (house mouse) | Pitrm1 | NP_660113.1 |
Danio rerio (zebrafish) | pitrm1 | NP_998652.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP006616 | XP_316646.4 |
Eremothecium gossypii | AGOS_ADR184W | NP_984280.2 |
Xenopus tropicalis (tropical clawed frog) | pitrm1 | NP_001039262.1 |
Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.
Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl?cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell LA, Mache R, Puigdom?nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu?tier F, Sch?fer M, M?ller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L?hnert TH, Nordsiek G, Reichelt J, Scharfe M, Sch?n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw?lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse AC, Alcaraz JP, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes HW, Mayer KF, Kaul S, Town CD, Koo HL, Tallon LJ, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii CY, Shea TP, Creasy TH, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill JE, Feldblyum TV, Preuss D, Lin X, Nierman WC, Salzberg SL, White O, Venter JC, Fraser CM, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,
Nature408(6814)820-2(2000 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Data show that the AtPreP presequence has the capacity to target GFP into the mitochondrial matrix of all three species.
Title: Targeting capacity and conservation of PreP homologues localization in mitochondria of different species.
The AtPreP peptidasome is required for efficient plant growth and organelle function particularly during early development.
Title: Deletion of an organellar peptidasome PreP affects early development in Arabidopsis thaliana.
AtPreP functions as a peptidasome that degrades targeting peptides and other small unstructured peptides. In addition to Zn located in the catalytic site, AtPreP also contains two Mg-binding sites. [PreP1]
Title: Binding of divalent cations is essential for the activity of the organellar peptidasome in Arabidopsis thaliana, AtPreP.
AtPreP1 and AtPreP2 genes are differentially expressed in Arabidopsis
Title: Two novel mitochondrial and chloroplastic targeting-peptide-degrading peptidasomes in A. thaliana, AtPreP1 and AtPreP2.
AtPrePI and AtPrePII are metalloproteases that degrade targeting peptides in mitochondria and chloroplasts. AtPrePI showed a preference for the N-terminal amphiphilic α-helix and positively charged amino acid residues.
Title: Catalysis, subcellular localization, expression and evolution of the targeting peptides degrading protease, AtPreP2.
The following PREP1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the PREP1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OAb11816 | |
Clone ID Related Accession (Same CDS sequence) | NM_112804.5 | |
Accession Version | NM_112804.5 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3243bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | presequence protease 1 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003074). On Sep 12, 2016 this sequence version replaced NM_112804.4. |
1 | ATGCTCCGAA CCGTCTCTTG TTTAGCTTCG CGCAGCTCGT CCTCTCTATT CTTTCGCTTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_188548.2 |
CDS | 291..3533 |
Translation |
Target ORF information:
Target ORF information:
|
NM_112804.5 |
1 | ATGCTCCGAA CCGTCTCTTG TTTAGCTTCG CGCAGCTCGT CCTCTCTATT CTTTCGCTTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb30125 | |
Clone ID Related Accession (Same CDS sequence) | NM_001203003.1 | |
Accession Version | NM_001203003.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3210bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | presequence protease 1 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003074). |
1 | ATGCTCCGAA CCGTCTCTTG TTTAGCTTCG CGCAGCTCGT CCTCTCTATT CTTTCGCTTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001189932.1 |
CDS | 95..3304 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001203003.1 |
1 | ATGCTCCGAA CCGTCTCTTG TTTAGCTTCG CGCAGCTCGT CCTCTCTATT CTTTCGCTTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. |