Gene Symbol | CDC48 |
Entrez Gene ID | 820142 |
Full Name | cell division cycle 48 |
Synonyms | ATCDC48,CDC48A,cell division cycle 48 |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
ORF » Species Summary » Arabidopsis thaliana » CDC48 cDNA ORF clone
Gene Symbol | CDC48 |
Entrez Gene ID | 820142 |
Full Name | cell division cycle 48 |
Synonyms | ATCDC48,CDC48A,cell division cycle 48 |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
mRNA | Protein | Name |
---|---|---|
NM_111819.5 | NP_187595.1 | cell division cycle 48 |
Pan troglodytes (chimpanzee) | VCP | XP_003312111.1 |
Gallus gallus (chicken) | VCP | NP_001038129.1 |
Magnaporthe oryzae (rice blast fungus) | MGG_05193 | XP_003712735.1 |
Canis lupus familiaris (dog) | VCP | XP_852626.1 |
Bos taurus (cattle) | VCP | NP_001029466.1 |
Mus musculus (house mouse) | Vcp | NP_033529.3 |
Drosophila melanogaster (fruit fly) | TER94 | NP_477369.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP005630 | XP_315644.3 |
Saccharomyces cerevisiae (baker's yeast) | CDC48 | NP_010157.1 |
Schizosaccharomyces pombe (fission yeast) | cdc48 | NP_593287.2 |
Neurospora crassa | NCU00018 | XP_957005.2 |
Arabidopsis thaliana (thale cress) | AT3G53230 | NP_190891.1 |
Rattus norvegicus (Norway rat) | Vcp | NP_446316.1 |
Danio rerio (zebrafish) | vcp | NP_958889.1 |
Kluyveromyces lactis | KLLA0F05676g | XP_455337.1 |
Arabidopsis thaliana (thale cress) | AT5G03340 | NP_568114.1 |
Oryza sativa (rice) | Os03g0151800 | NP_001048987.1 |
Xenopus tropicalis (tropical clawed frog) | vcp | NP_001005677.1 |
Caenorhabditis elegans (roundworm) | cdc-48.1 | NP_496273.1 |
Caenorhabditis elegans (roundworm) | cdc-48.2 | NP_495705.1 |
Arabidopsis thaliana (thale cress) | CDC48 | NP_187595.1 |
Homo sapiens (human) | VCP | NP_009057.1 |
Eremothecium gossypii | AGOS_AFR158W | NP_985705.2 |
Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.
Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl?cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell LA, Mache R, Puigdom?nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu?tier F, Sch?fer M, M?ller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L?hnert TH, Nordsiek G, Reichelt J, Scharfe M, Sch?n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw?lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse AC, Alcaraz JP, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes HW, Mayer KF, Kaul S, Town CD, Koo HL, Tallon LJ, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii CY, Shea TP, Creasy TH, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill JE, Feldblyum TV, Preuss D, Lin X, Nierman WC, Salzberg SL, White O, Venter JC, Fraser CM, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,
Nature408(6814)820-2(2000 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
As an AAA ATPase, AtCDC48A likely serves to process the polyubiquitinated NLR substrate for final protein degradation by the 26S proteasome. [AtCDC48A]
Title: AtCDC48A is involved in the turnover of an NLR immune receptor.
results indicate that the CDC48A(NPL4) complex actively removes sumoylated CenH3 from centromeres and disrupts centromeric heterochromatin to release bulk rRNA genes into the nucleolus for ribosome production.
Title: The AAA-ATPase molecular chaperone Cdc48/p97 disassembles sumoylated centromeres, decondenses heterochromatin, and activates ribosomal RNA genes.
Arabidopsis (Arabidopsis thaliana) CDC48 is induced upon infection, interacts with MP in endoplasmic reticulum inclusions dependent on the MP N terminus, and promotes degradation of the protein.
Title: Control of Tobacco mosaic virus movement protein fate by CELL-DIVISION-CYCLE protein48.
critical for cytokinesis, cell expansion, and differentiation in plants
Title: In planta analysis of the cell cycle-dependent localization of AtCDC48A and its critical roles in cell division, expansion, and differentiation.
Employing fluorescence correlation spectroscopy, it was shown that CDC48A hexamers are part of larger complexes.
Title: In vivo hexamerization and characterization of the Arabidopsis AAA ATPase CDC48A complex using forster resonance energy transfer-fluorescence lifetime imaging microscopy and fluorescence correlation spectroscopy.
The following CDC48 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CDC48 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OAb10698 | |
Clone ID Related Accession (Same CDS sequence) | NM_111819.5 | |
Accession Version | NM_111819.5 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2430bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | cell division cycle 48 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003074). On Sep 12, 2016 this sequence version replaced NM_111819.4. |
1 | ATGTCTACCC CAGCTGAATC TTCAGACTCG AAATCGAAGA AAGATTTCAG TACTGCTATT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_187595.1 |
CDS | 246..2675 |
Translation |
Target ORF information:
Target ORF information:
|
NM_111819.5 |
1 | ATGTCTACCC CAGCTGAATC TTCAGACTCG AAATCGAAGA AAGATTTCAG TACTGCTATT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. |