COL9A3 cDNA ORF clone, Gallus gallus(chicken)

Gene
Clones
gRNAs

Summary

Gene Symbol	COL9A3
Entrez Gene ID	396242
Full Name	collagen type IX alpha 3 chain
General protein information	Preferred Names collagen type IX alpha 3 chain Names collagen alpha-3(IX) chain collagen, type IX, alpha 3 collagen-alpha-3 type IX
Gene Type	protein-coding
Organism	Gallus gallus(chicken)

mRNA and Protein(s)

mRNA	Protein	Name
NM_205305.1	NP_990636.1	collagen alpha-3(IX) chain precursor

Pathways from BioSystems

Homologies

Gallus gallus (chicken)	COL9A3	NP_990636.1
Bos taurus (cattle)	COL9A3	XP_002692454.2
Mus musculus (house mouse)	Col9a3	NP_034066.2
Rattus norvegicus (Norway rat)	Col9a3	XP_003749688.1
Homo sapiens (human)	COL9A3	NP_001844.3
Canis lupus familiaris (dog)	COL9A3	NP_001184100.1
Danio rerio (zebrafish)	col9a3	XP_695491.2
Xenopus tropicalis (tropical clawed frog)	col9a3	NP_001120497.1
Pan troglodytes (chimpanzee)	COL9A3	XP_001150788.1

Gene Ontology
Bibliography

Related articles in PubMed

Tescalcin, a novel gene encoding a putative EF-hand Ca(2+)-binding protein, Col9a3, and renin are expressed in the mouse testis during the early stages of gonadal differentiation.
Perera EM, Martin H, Seeherunvong T, Kos L, Hughes IA, Hawkins JR, Berkovitz GD
Endocrinology142(1)455-63(2001 Jan)

Cloning and developmental expression of the alpha 3 chain of chicken type IX collagen.
Har-el R, Sharma YD, Aguilera A, Ueyama N, Wu JJ, Eyre DR, Jurici? L, Chandrasekaran S, Li M, Nah HD
The Journal of biological chemistry267(14)10070-6(1992 May)

Cloning of the chicken alpha 3(IX) collagen chain completes the primary structure of type IX collagen.
Brewton RG, Ouspenskaia MV, van der Rest M, Mayne R
European journal of biochemistry205(2)443-9(1992 Apr)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

Compares chick & mouse COL9A3, and shows expression during mouse testes differentiation.
Title: Tescalcin, a novel gene encoding a putative EF-hand Ca(2+)-binding protein, Col9a3, and renin are expressed in the mouse testis during the early stages of gonadal differentiation.

The following COL9A3 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the COL9A3 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OGa26819	NM_205305.1 Latest version!	Gallus gallus collagen type IX alpha 3 chain (COL9A3), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	TBD	$426.30 $609.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

COL9A3 ( NM_205305.1 ) cDNA ORF clone, Gallus gallus(chicken) -> NP_990636.1 Gallus gallus collagen type IX alpha 3 chain (COL9A3), mRNA.

Price & Availability↑

CloneID	OGa26819
Clone ID Related Accession (Same CDS sequence)	NM_205305.1
Accession Version	NM_205305.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2028bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-12-25
Organism	Gallus gallus(chicken)
Product	collagen alpha-3(IX) chain precursor
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from X64712.1. ##Evidence-Data-START## Transcript exon combination :: X64712.1, M83179.1 [ECO:0000332] ##Evidence-Data-END##

ATGACTGTAT TCCCCACTCT TGGGCTACTC TTCCTTTGTC AGCTATTAGC CACAACATCA 
GCTCAGAGAG TAGGACCACA AGGCCCTCCT GGACCACGAG GACCCCCTGG ACCATCTGGC 
AAGGACGGCA TAGATGGTGA GCCGGGCCCT TCTGGTTTGC CAGGCCCACC AGGACCAAAG 
GGTGCACCAG GAAAGCCTGG AGCAGCTGGT GAAGCTGGGC TGCCTGGCCT TCCTGGAGTA 
GACGGTTTAA CAGGAACTGA TGGCCCTCCT GGCCCAAATG GGCCTCCAGG AGACCGTGGT 
GCATTGGGAC CTGCTGGGCC ACCTGGACCA GCTGGTAAAG GACTACCAGG ACCCCCAGGG 
CCTCCAGGAC CCAGTGGACT TCCAGGTGGA AATGGATTTC GGGGTCCTCC TGGGCCTTCT 
GGTCTGCCAG GATTCCCAGG GCCTCCTGGA CCACCCGGAC CTCCCGGTCT CGCAGGCATC 
ATTCCCGAAG GCGGTGGGGA CCTCCAGTGC CCAGCTCTGT GCCCACCAGG TCCTCCTGGT 
CCTCCAGGAA TGCCAGGCTT CAAGGGACAC ACTGGTCACA AAGGAGAACC TGGTGAAATA 
GGCAAAGAAG GAGAGAAGGG CAGCCCTGGC CCTCCGGGTC CTCCAGGCAT CCCTGGCAGC 
GTTGGCCTGC AGGGCCCAAG AGGACTAAGA GGTCTCCCTG GTCCAATGGG TCCAGCTGGT 
GACAGAGGTG ACATCGGTTT CAGAGGGCCG CCTGGAATCC CAGGACCTCC GGGGAGAGCT 
GGAGACCAAG GAAACAAAGG ACCTCAAGGA TTCAGAGGGC CCAAAGGCGA TACTGGTAGA 
CCCGGACCAA AAGGAAACCC AGGGGCTCGT GGGCTCATAG GAGAACCTGG CATACCTGGC 
AAGGATGGAC GGGATGGAGC TCCTGGACTC GATGGTGAGA AGGGTGATGC AGCTCGGATG 
GGTGTTCCTG GAGAGAAGGG GCCAAACGGA CTTCCTGGAC TGCCTGGAAG AGCAGGGATT 
AAAGGCTCTA AAGGTGAACC AGGCAGTCCT GGAGAGATGG GAGAGGCGGG TCCCTCTGGA 
GAGCCAGGTA TCCCCGGCGA TGTCGGTATT CCTGGTGATA GAGGTCTGCC GGGACCCAGA 
GGAGCAACTG GTCCCGTTGG TCTCCCAGGC CCCATTGGAG CTCCCGGTGT CCGAGGCTTC 
CAGGGTCCCA AAGGTGCCAG TGGGGAACCT GGCCTTCCTG GTCCGACTGG AATTCGTGGA 
GAGTCTGGTG ACAGGGGTCC TGCTGGTGTT ATTGGTGCCA AAGGTAGCCA GGGCATTGCT 
GGAGCAGACG GTCTCCCAGG TGACAAAGGA GAACTGGGTC CCTTTGGTCC TCCCGGCCAA 
AAAGGAGAGC CAGGAAAAAG AGGAGAACTG GGTCCAAAAG GTGCTCAAGG ACCCAATGGG 
ACAGCTGGAG CTCCAGGGAT CCCAGGACAC CCAGGGCCCA TGGGCCATCA GGGGGAGCAG 
GGCGTTCCTG GCATCACAGG CAAACCGGGG CCTCCTGGCA AAGAGGCCAG CGAGCAACAT 
ATAAGAGAAC TCTGTGGGGA AATGATAAAC GATCAAATTG CACAGTTAGC TGCTAATCTA 
AGAAAGCCCT TATCTCCTGG GATGACCGGG CGCCCTGGTC CTGCTGGTCC ACCGGGTCCT 
CCAGGAGCGA CGGGAAGCGT TGGACATCCT GGTGCTCGTG GTCCACCCGG ATACAGAGGG 
CCAACAGGAG AGCTTGGTGA TCCTGGTCCC AGAGGTGACA CTGGTGAAAA GGGAGATAAA 
GGACCAGCTG GACAAGGAAT TGATGGGCCT GATGGTGATC AAGGACCTCA AGGACTTCCT 
GGTGTACCTG GAATTAGTAA AAATGGTCGG GATGGTGCTC AGGGTGAACC CGGTCTTCCA 
GGGGATCCCG GTACTCCTGG TGCTGTTGGG GCTCAGGGAA CTCCAGGCAT ATGTGACACA 
TCAGCTTGCA TGGGAGCTGT CGGAGCATCG ACTTCCAAAA AGTCATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_990636.1
CDS	41..2068
Translation	MTVFPTLGLLFLCQLLATTSAQRVGPQGPPGPRGPPGPSGKDGIDGEPGPSGLPGPPGPKGAPGKPGAAGEAGLPGLPGVDGLTGTDGPPGPNGPPGDRGALGPAGPPGPAGKGLPGPPGPPGPSGLPGGNGFRGPPGPSGLPGFPGPPGPPGPPGLAGIIPEGGGDLQCPALCPPGPPGPPGMPGFKGHTGHKGEPGEIGKEGEKGSPGPPGPPGIPGSVGLQGPRGLRGLPGPMGPAGDRGDIGFRGPPGIPGPPGRAGDQGNKGPQGFRGPKGDTGRPGPKGNPGARGLIGEPGIPGKDGRDGAPGLDGEKGDAARMGVPGEKGPNGLPGLPGRAGIKGSKGEPGSPGEMGEAGPSGEPGIPGDVGIPGDRGLPGPRGATGPVGLPGPIGAPGVRGFQGPKGASGEPGLPGPTGIRGESGDRGPAGVIGAKGSQGIAGADGLPGDKGELGPFGPPGQKGEPGKRGELGPKGAQGPNGTAGAPGIPGHPGPMGHQGEQGVPGITGKPGPPGKEASEQHIRELCGEMINDQIAQLAANLRKPLSPGMTGRPGPAGPPGPPGATGSVGHPGARGPPGYRGPTGELGDPGPRGDTGEKGDKGPAGQGIDGPDGDQGPQGLPGVPGISKNGRDGAQGEPGLPGDPGTPGAVGAQGTPGICDTSACMGAVGASTSKKS

Target ORF information:

RefSeq Version	NM_205305.1
Organism	Gallus gallus(chicken)
Definition	Gallus gallus collagen type IX alpha 3 chain (COL9A3), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_205305.1

ORF Insert Sequence:

ATGACTGTAT TCCCCACTCT TGGGCTACTC TTCCTTTGTC AGCTATTAGC CACAACATCA 
GCTCAGAGAG TAGGACCACA AGGCCCTCCT GGACCACGAG GACCCCCTGG ACCATCTGGC 
AAGGACGGCA TAGATGGTGA GCCGGGCCCT TCTGGTTTGC CAGGCCCACC AGGACCAAAG 
GGTGCACCAG GAAAGCCTGG AGCAGCTGGT GAAGCTGGGC TGCCTGGCCT TCCTGGAGTA 
GACGGTTTAA CAGGAACTGA TGGCCCTCCT GGCCCAAATG GGCCTCCAGG AGACCGTGGT 
GCATTGGGAC CTGCTGGGCC ACCTGGACCA GCTGGTAAAG GACTACCAGG ACCCCCAGGG 
CCTCCAGGAC CCAGTGGACT TCCAGGTGGA AATGGATTTC GGGGTCCTCC TGGGCCTTCT 
GGTCTGCCAG GATTCCCAGG GCCTCCTGGA CCACCCGGAC CTCCCGGTCT CGCAGGCATC 
ATTCCCGAAG GCGGTGGGGA CCTCCAGTGC CCAGCTCTGT GCCCACCAGG TCCTCCTGGT 
CCTCCAGGAA TGCCAGGCTT CAAGGGACAC ACTGGTCACA AAGGAGAACC TGGTGAAATA 
GGCAAAGAAG GAGAGAAGGG CAGCCCTGGC CCTCCGGGTC CTCCAGGCAT CCCTGGCAGC 
GTTGGCCTGC AGGGCCCAAG AGGACTAAGA GGTCTCCCTG GTCCAATGGG TCCAGCTGGT 
GACAGAGGTG ACATCGGTTT CAGAGGGCCG CCTGGAATCC CAGGACCTCC GGGGAGAGCT 
GGAGACCAAG GAAACAAAGG ACCTCAAGGA TTCAGAGGGC CCAAAGGCGA TACTGGTAGA 
CCCGGACCAA AAGGAAACCC AGGGGCTCGT GGGCTCATAG GAGAACCTGG CATACCTGGC 
AAGGATGGAC GGGATGGAGC TCCTGGACTC GATGGTGAGA AGGGTGATGC AGCTCGGATG 
GGTGTTCCTG GAGAGAAGGG GCCAAACGGA CTTCCTGGAC TGCCTGGAAG AGCAGGGATT 
AAAGGCTCTA AAGGTGAACC AGGCAGTCCT GGAGAGATGG GAGAGGCGGG TCCCTCTGGA 
GAGCCAGGTA TCCCCGGCGA TGTCGGTATT CCTGGTGATA GAGGTCTGCC GGGACCCAGA 
GGAGCAACTG GTCCCGTTGG TCTCCCAGGC CCCATTGGAG CTCCCGGTGT CCGAGGCTTC 
CAGGGTCCCA AAGGTGCCAG TGGGGAACCT GGCCTTCCTG GTCCGACTGG AATTCGTGGA 
GAGTCTGGTG ACAGGGGTCC TGCTGGTGTT ATTGGTGCCA AAGGTAGCCA GGGCATTGCT 
GGAGCAGACG GTCTCCCAGG TGACAAAGGA GAACTGGGTC CCTTTGGTCC TCCCGGCCAA 
AAAGGAGAGC CAGGAAAAAG AGGAGAACTG GGTCCAAAAG GTGCTCAAGG ACCCAATGGG 
ACAGCTGGAG CTCCAGGGAT CCCAGGACAC CCAGGGCCCA TGGGCCATCA GGGGGAGCAG 
GGCGTTCCTG GCATCACAGG CAAACCGGGG CCTCCTGGCA AAGAGGCCAG CGAGCAACAT 
ATAAGAGAAC TCTGTGGGGA AATGATAAAC GATCAAATTG CACAGTTAGC TGCTAATCTA 
AGAAAGCCCT TATCTCCTGG GATGACCGGG CGCCCTGGTC CTGCTGGTCC ACCGGGTCCT 
CCAGGAGCGA CGGGAAGCGT TGGACATCCT GGTGCTCGTG GTCCACCCGG ATACAGAGGG 
CCAACAGGAG AGCTTGGTGA TCCTGGTCCC AGAGGTGACA CTGGTGAAAA GGGAGATAAA 
GGACCAGCTG GACAAGGAAT TGATGGGCCT GATGGTGATC AAGGACCTCA AGGACTTCCT 
GGTGTACCTG GAATTAGTAA AAATGGTCGG GATGGTGCTC AGGGTGAACC CGGTCTTCCA 
GGGGATCCCG GTACTCCTGG TGCTGTTGGG GCTCAGGGAA CTCCAGGCAT ATGTGACACA 
TCAGCTTGCA TGGGAGCTGT CGGAGCATCG ACTTCCAAAA AGTCATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Tescalcin, a novel gene encoding a putative EF-hand Ca(2+)-binding protein, Col9a3, and renin are expressed in the mouse testis during the early stages of gonadal differentiation.
Endocrinology142(1)455-63(2001 Jan)
Perera EM,Martin H,Seeherunvong T,Kos L,Hughes IA,Hawkins JR,Berkovitz GD

Cloning and developmental expression of the alpha 3 chain of chicken type IX collagen.
The Journal of biological chemistry267(14)10070-6(1992 May)
Har-el R,Sharma YD,Aguilera A,Ueyama N,Wu JJ,Eyre DR,Jurici? L,Chandrasekaran S,Li M,Nah HD

Cloning of the chicken alpha 3(IX) collagen chain completes the primary structure of type IX collagen.
European journal of biochemistry205(2)443-9(1992 Apr)
Brewton RG,Ouspenskaia MV,van der Rest M,Mayne R

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COL9A3 cDNA ORF clone, Gallus gallus(chicken)

Gene

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gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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