ORF » Species Summary » Danio rerio » si:dkey-33i11.4 cDNA ORF clone

si:dkey-33i11.4 cDNA ORF clone, Danio rerio(zebrafish)

The following si:dkey-33i11.4 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the si:dkey-33i11.4 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
ODa01253 NM_001282018.1
Latest version!		 Danio rerio si:dkey-33i11.4 (si:dkey-33i11.4), transcript variant 1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $104.30
$149.00
ODa01254 NM_001282020.1
Latest version!		 Danio rerio si:dkey-33i11.4 (si:dkey-33i11.4), transcript variant 2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $104.30
$149.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    si:dkey-33i11.4 ( NM_001282018.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001268947.1 Danio rerio si:dkey-33i11.4 (si:dkey-33i11.4), transcript variant 1, mRNA.
    Price & Availability↑
    CloneID ODa01253
    Clone ID Related Accession (Same CDS sequence) NM_001282018.1
    Accession Version NM_001282018.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 210bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2019-12-27
    Organism Danio rerio(zebrafish)
    Product FXYD domain-containing ion transport regulator 11 isoform 1 precursor
    Comment Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH457718.1 and EH447516.1. On Aug 31, 2013 this sequence version replaced XR_222395.1. Transcript Variant: This variant (1) encodes the longer protein (isoform 1). ##Evidence-Data-START## Transcript exon combination :: EH447516.1, DT865362.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476803, SAMEA4476812 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. 

    1
    61
    121
    181
    ATGAGCCAGC TCACAGAACT AGTTCTCCTA ACAGTCTTCT TGGCACTGTT CAGTCGAGCA 
    GAAGCAAATC CTTTTGTTTA CAACTATGAG GCGCTGAGGA TCGGGGGTTT GGTCTTCACA 
    TGTGTGCTTG TAGCAGGAGC TGTTACAGCT CTGTGTTGGG GGCAGTGCAA ACCAAAAAGA 
    AAGCATGATG ATGACGCAAG CAAAATCTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq NP_001268947.1
    CDS71..280
    Translation

    Target ORF information:

    RefSeq Version NM_001282018.1
    Organism Danio rerio(zebrafish)
    Definition Danio rerio si:dkey-33i11.4 (si:dkey-33i11.4), transcript variant 1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 NM_001282018.1

    ORF Insert Sequence:

    1
    61
    121
    181
    ATGAGCCAGC TCACAGAACT AGTTCTCCTA ACAGTCTTCT TGGCACTGTT CAGTCGAGCA 
    GAAGCAAATC CTTTTGTTTA CAACTATGAG GCGCTGAGGA TCGGGGGTTT GGTCTTCACA 
    TGTGTGCTTG TAGCAGGAGC TGTTACAGCT CTGTGTTGGG GGCAGTGCAA ACCAAAAAGA 
    AAGCATGATG ATGACGCAAG CAAAATCTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    si:dkey-33i11.4 ( NM_001282020.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001268949.1 Danio rerio si:dkey-33i11.4 (si:dkey-33i11.4), transcript variant 2, mRNA.
    Price & Availability↑
    CloneID ODa01254
    Clone ID Related Accession (Same CDS sequence) NM_001282020.1
    Accession Version NM_001282020.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 186bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2019-12-27
    Organism Danio rerio(zebrafish)
    Product FXYD domain-containing ion transport regulator 11 isoform 2 precursor
    Comment Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH449767.1 and EH447516.1. On Aug 31, 2013 this sequence version replaced XR_222394.1. Transcript Variant: This variant (2) uses an alternate splice site in the 3' coding region compared to variant 1. The resulting protein (isoform 2) is shorter and has a distinct C-terminus compared to isoform 1. ##Evidence-Data-START## Transcript exon combination :: EH443169.1, EH452406.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476803, SAMEA4476812 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. 

    1
    61
    121
    181
    ATGAGCCAGC TCACAGAACT AGTTCTCCTA ACAGTCTTCT TGGCACTGTT CAGTCGAGCA 
    GAAGCAAATC CTTTTGTTTA CAACTATGAG GCGCTGAGGA TCGGGGGTTT GGTCTTCACA 
    TGTGTGCTTG TAGCAGGAGC TGTTACAGCT CTGTGTTGGG GGCAGTGCAA ACCAAAAAGA 
    AAGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq NP_001268949.1
    CDS71..256
    Translation

    Target ORF information:

    RefSeq Version NM_001282020.1
    Organism Danio rerio(zebrafish)
    Definition Danio rerio si:dkey-33i11.4 (si:dkey-33i11.4), transcript variant 2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 NM_001282020.1

    ORF Insert Sequence:

    1
    61
    121
    181
    ATGAGCCAGC TCACAGAACT AGTTCTCCTA ACAGTCTTCT TGGCACTGTT CAGTCGAGCA 
    GAAGCAAATC CTTTTGTTTA CAACTATGAG GCGCTGAGGA TCGGGGGTTT GGTCTTCACA 
    TGTGTGCTTG TAGCAGGAGC TGTTACAGCT CTGTGTTGGG GGCAGTGCAA ACCAAAAAGA 
    AAGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
    BMC genomics17368(2016 05)
    Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J


    The zebrafish reference genome sequence and its relationship to the human genome.
    Nature496(7446)498-503(2013 Apr)
    Howe K,Clark MD,Torroja CF,Torrance J,Berthelot C,Muffato M,Collins JE,Humphray S,McLaren K,Matthews L,McLaren S,Sealy I,Caccamo M,Churcher C,Scott C,Barrett JC,Koch R,Rauch GJ,White S,Chow W,Kilian B,Quintais LT,Guerra-Assun??o JA,Zhou Y,Gu Y,Yen J,Vogel JH,Eyre T,Redmond S,Banerjee R,Chi J,Fu B,Langley E,Maguire SF,Laird GK,Lloyd D,Kenyon E,Donaldson S,Sehra H,Almeida-King J,Loveland J,Trevanion S,Jones M,Quail M,Willey D,Hunt A,Burton J,Sims S,McLay K,Plumb B,Davis J,Clee C,Oliver K,Clark R,Riddle C,Elliot D,Eliott D,Threadgold G,Harden G,Ware D,Begum S,Mortimore B,Mortimer B,Kerry G,Heath P,Phillimore B,Tracey A,Corby N,Dunn M,Johnson C,Wood J,Clark S,Pelan S,Griffiths G,Smith M,Glithero R,Howden P,Barker N,Lloyd C,Stevens C,Harley J,Holt K,Panagiotidis G,Lovell J,Beasley H,Henderson C,Gordon D,Auger K,Wright D,Collins J,Raisen C,Dyer L,Leung K,Robertson L,Ambridge K,Leongamornlert D,McGuire S,Gilderthorp R,Griffiths C,Manthravadi D,Nichol S,Barker G,Whitehead S,Kay M,Brown J,Murnane C,Gray E,Humphries M,Sycamore N,Barker D,Saunders D,Wallis J,Babbage A,Hammond S,Mashreghi-Mohammadi M,Barr L,Martin S,Wray P,Ellington A,Matthews N,Ellwood M,Woodmansey R,Clark G,Cooper J,Cooper J,Tromans A,Grafham D,Skuce C,Pandian R,Andrews R,Harrison E,Kimberley A,Garnett J,Fosker N,Hall R,Garner P,Kelly D,Bird C,Palmer S,Gehring I,Berger A,Dooley CM,Ersan-?r?n Z,Eser C,Geiger H,Geisler M,Karotki L,Kirn A,Konantz J,Konantz M,Oberl?nder M,Rudolph-Geiger S,Teucke M,Lanz C,Raddatz G,Osoegawa K,Zhu B,Rapp A,Widaa S,Langford C,Yang F,Schuster SC,Carter NP,Harrow J,Ning Z,Herrero J,Searle SM,Enright A,Geisler R,Plasterk RH,Lee C,Westerfield M,de Jong PJ,Zon LI,Postlethwait JH,N?sslein-Volhard C,Hubbard TJ,Roest Crollius H,Rogers J,Stemple DL


    Identification of zebrafish Fxyd11a protein that is highly expressed in ion-transporting epithelium of the gill and skin and its possible role in ion homeostasis.
    Frontiers in physiology1129(2010)
    Saito K,Nakamura N,Ito Y,Hoshijima K,Esaki M,Zhao B,Hirose S


    Identification, characterization, and mapping of expressed sequence tags from an embryonic zebrafish heart cDNA library.
    Genome research10(12)1915-27(2000 Dec)
    Ton C,Hwang DM,Dempsey AA,Tang HC,Yoon J,Lim M,Mably JD,Fishman MC,Liew CC


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