si:dkey-188i13.10 cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	si:dkey-188i13.10
Entrez Gene ID	558285
Full Name	si:dkey-188i13.10
General protein information	Preferred Names si:dkey-188i13.10 Names interferon alpha-inducible protein 27-like interferon-induced 6-16 family domain
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
XM_005156995.4	XP_005157052.1	interferon alpha-inducible protein 27-like isoform X1
XM_005156995.3	XP_005157052.1	interferon alpha-inducible protein 27-like isoform X1
NM_001172636.1	NP_001166107.1	interferon alpha-inducible protein 27-like

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

Contrasted innate responses to two viruses in zebrafish: insights into the ancestral repertoire of vertebrate IFN-stimulated genes.
Briolat V, Jouneau L, Carvalho R, Palha N, Langevin C, Herbomel P, Schwartz O, Spaink HP, Levraud JP, Boudinot P
Journal of immunology (Baltimore, Md. : 1950)192(9)4328-41(2014 May)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following si:dkey-188i13.10 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the si:dkey-188i13.10 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
ODa32923	NM_001172636.1 Latest version!	Danio rerio si:dkey-188i13.10 (si:dkey-188i13.10), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$104.30 $149.00
ODa18984	XM_005156995.4 Latest version!	Danio rerio si:dkey-188i13.10 (si:dkey-188i13.10), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$104.30 $149.00
View Old Accession Versions >>
ODa18984	XM_005156995.3	Danio rerio si:dkey-188i13.10 (si:dkey-188i13.10), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$104.30 $149.00
Hide Old Accession Versions >>

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

si:dkey-188i13.10 ( NM_001172636.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001166107.1 Danio rerio si:dkey-188i13.10 (si:dkey-188i13.10), mRNA.

Price & Availability↑

CloneID	ODa32923
Clone ID Related Accession (Same CDS sequence)	NM_001172636.1
Accession Version	NM_001172636.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 315bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-11-23
Organism	Danio rerio(zebrafish)
Product	interferon alpha-inducible protein 27-like
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BX005106.5 and EH475332.1. On May 20, 2010 this sequence version replaced XM_699725.3. ##Evidence-Data-START## Transcript exon combination :: EH478814.1, EH505364.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476787 [ECO:0000348] ##Evidence-Data-END##

ATGCCGAAAG TATCTACCAT TATTGGGATT GCAGCTGGAG CTGCTGGTGC CGTTGCTTTG 
ACCCCGCTGG CGCTCGGCAT GGTCGGGTTT TCTGTTGCTG GCATCACAGC GGGTTCTATG 
GCAGCTGGTA TGATGTCCAC AGCGGCCATC GCTAATGGTG GTGGTGTGGC TGCTGGAAGT 
GTAGTCGCTC TCCTCCAGTC AGCAGGTGCT GCTGGTTTGT CCTCAGCAGC AACAGCTGGT 
GTGGCATCTG TAGGTGGTGC TGCAGGGGGG CTATTAGGTG GAGCTGTTCA TTTGTTGAAG 
AGGTTGAAGA AATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001166107.1
CDS	66..380
Translation	MPKVSTIIGIAAGAAGAVALTPLALGMVGFSVAGITAGSMAAGMMSTAAIANGGGVAAGSVVALLQSAGAAGLSSAATAGVASVGGAAGGLLGGAVHLLKRLKK

Target ORF information:

RefSeq Version	NM_001172636.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio si:dkey-188i13.10 (si:dkey-188i13.10), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001172636.1

ORF Insert Sequence:

ATGCCGAAAG TATCTACCAT TATTGGGATT GCAGCTGGAG CTGCTGGTGC CGTTGCTTTG 
ACCCCGCTGG CGCTCGGCAT GGTCGGGTTT TCTGTTGCTG GCATCACAGC GGGTTCTATG 
GCAGCTGGTA TGATGTCCAC AGCGGCCATC GCTAATGGTG GTGGTGTGGC TGCTGGAAGT 
GTAGTCGCTC TCCTCCAGTC AGCAGGTGCT GCTGGTTTGT CCTCAGCAGC AACAGCTGGT 
GTGGCATCTG TAGGTGGTGC TGCAGGGGGG CTATTAGGTG GAGCTGTTCA TTTGTTGAAG 
AGGTTGAAGA AATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

si:dkey-188i13.10 ( XM_005156995.4 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_005157052.1 Danio rerio si:dkey-188i13.10 (si:dkey-188i13.10), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ODa18984
Clone ID Related Accession (Same CDS sequence)	XM_005156995.4 , XM_005156995.3
Accession Version	XM_005156995.4 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 324bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-06-14
Organism	Danio rerio(zebrafish)
Product	interferon alpha-inducible protein 27-like isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007124.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_005156995.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGTTATGTT TATTTGCAGT ATCTACCATT ATTGGGATTG CAGCTGGAGC TGCTGGTGCC 
GTTGCTTTGA CCCCGCTGGC GCTCGGCATG GTCGGGTTTT CTGTTGCTGG CATCACAGCG 
GGTTCTATGG CAGCTGGTAT GATGTCCACA GCGGCCATCG CTAATGGTGG TGGTGTGGCT 
GCTGGAAGTG TAGTCGCTCT CCTCCAGTCA GCAGGTGCTG CTGGTTTGTC CTCAGCAGCA 
ACAGCTGGTG TGGCATCTGT AGGTGGTGCT GCAGGGGGGC TATTAGGTGG AGCTGTTCAT 
TTGTTGAAGA GGTTGAAGAA ATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_005157052.1
CDS	2291..2614
Translation	MLCLFAVSTIIGIAAGAAGAVALTPLALGMVGFSVAGITAGSMAAGMMSTAAIANGGGVAAGSVVALLQSAGAAGLSSAATAGVASVGGAAGGLLGGAVHLLKRLKK

Target ORF information:

RefSeq Version	XM_005156995.4
Organism	Danio rerio(zebrafish)
Definition	Danio rerio si:dkey-188i13.10 (si:dkey-188i13.10), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_005156995.4

ORF Insert Sequence:

ATGTTATGTT TATTTGCAGT ATCTACCATT ATTGGGATTG CAGCTGGAGC TGCTGGTGCC 
GTTGCTTTGA CCCCGCTGGC GCTCGGCATG GTCGGGTTTT CTGTTGCTGG CATCACAGCG 
GGTTCTATGG CAGCTGGTAT GATGTCCACA GCGGCCATCG CTAATGGTGG TGGTGTGGCT 
GCTGGAAGTG TAGTCGCTCT CCTCCAGTCA GCAGGTGCTG CTGGTTTGTC CTCAGCAGCA 
ACAGCTGGTG TGGCATCTGT AGGTGGTGCT GCAGGGGGGC TATTAGGTGG AGCTGTTCAT 
TTGTTGAAGA GGTTGAAGAA ATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

si:dkey-188i13.10 ( XM_005156995.3 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_005157052.1 Danio rerio si:dkey-188i13.10 (si:dkey-188i13.10), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ODa18984
Clone ID Related Accession (Same CDS sequence)	XM_005156995.4 , XM_005156995.3
Accession Version	XM_005156995.3	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 324bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-06-23
Organism	Danio rerio(Zebrafish)
Product	interferon alpha-inducible protein 27-like isoform X1
Comment	MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007124.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_005156995.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGTTATGTT TATTTGCAGT ATCTACCATT ATTGGGATTG CAGCTGGAGC TGCTGGTGCC 
GTTGCTTTGA CCCCGCTGGC GCTCGGCATG GTCGGGTTTT CTGTTGCTGG CATCACAGCG 
GGTTCTATGG CAGCTGGTAT GATGTCCACA GCGGCCATCG CTAATGGTGG TGGTGTGGCT 
GCTGGAAGTG TAGTCGCTCT CCTCCAGTCA GCAGGTGCTG CTGGTTTGTC CTCAGCAGCA 
ACAGCTGGTG TGGCATCTGT AGGTGGTGCT GCAGGGGGGC TATTAGGTGG AGCTGTTCAT 
TTGTTGAAGA GGTTGAAGAA ATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_005157052.1
CDS	2289..2612
Translation	MLCLFAVSTIIGIAAGAAGAVALTPLALGMVGFSVAGITAGSMAAGMMSTAAIANGGGVAAGSVVALLQSAGAAGLSSAATAGVASVGGAAGGLLGGAVHLLKRLKK

Target ORF information:

RefSeq Version	XM_005156995.3
Organism	Danio rerio(Zebrafish)
Definition	Danio rerio si:dkey-188i13.10 (si:dkey-188i13.10), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_005156995.3

ORF Insert Sequence:

ATGTTATGTT TATTTGCAGT ATCTACCATT ATTGGGATTG CAGCTGGAGC TGCTGGTGCC 
GTTGCTTTGA CCCCGCTGGC GCTCGGCATG GTCGGGTTTT CTGTTGCTGG CATCACAGCG 
GGTTCTATGG CAGCTGGTAT GATGTCCACA GCGGCCATCG CTAATGGTGG TGGTGTGGCT 
GCTGGAAGTG TAGTCGCTCT CCTCCAGTCA GCAGGTGCTG CTGGTTTGTC CTCAGCAGCA 
ACAGCTGGTG TGGCATCTGT AGGTGGTGCT GCAGGGGGGC TATTAGGTGG AGCTGTTCAT 
TTGTTGAAGA GGTTGAAGAA ATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

Contrasted innate responses to two viruses in zebrafish: insights into the ancestral repertoire of vertebrate IFN-stimulated genes.
Journal of immunology (Baltimore, Md. : 1950)192(9)4328-41(2014 May)
Briolat V,Jouneau L,Carvalho R,Palha N,Langevin C,Herbomel P,Schwartz O,Spaink HP,Levraud JP,Boudinot P

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si:dkey-188i13.10 cDNA ORF clone, Danio rerio(zebrafish)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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