FAM49A cDNA ORF clone, Danio rerio(Zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	FAM49A
Entrez Gene ID	445212
Full Name	family with sequence similarity 49, member A-like
Synonyms	fam49a,fam49aa,zgc:100996
General protein information	Preferred Names family with sequence similarity 49, member A-like Names uncharacterized protein LOC445212
Gene Type	protein-coding
Organism	Danio rerio(Zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
XM_017352223.1	XP_017207712.1	uncharacterized protein LOC445212 isoform X1
NM_001003606.3	NP_001003606.1	uncharacterized protein LOC445212
XM_005159614.2	XP_005159671.1	uncharacterized protein LOC445212 isoform X1
XM_005159616.4	XP_005159673.1	uncharacterized protein LOC445212 isoform X2
XM_005159616.3	XP_005159673.1	uncharacterized protein LOC445212 isoform X2

Pathways from BioSystems

Homologies

Danio rerio (zebrafish)	fam49a	NP_001003606.1
Xenopus tropicalis (tropical clawed frog)	LOC548655	NP_001015901.1
Gallus gallus (chicken)	LOC419677	XP_004947939.1

Gene Ontology
Bibliography

Related articles in PubMed

Evolution of complexity in the zebrafish synapse proteome.
Bay?s ?, Collins MO, Reig-Viader R, Gou G, Goulding D, Izquierdo A, Choudhary JS, Emes RD, Grant SG
Nature communications814613(2017 Mar)

Ndrg1b and fam49ab modulate the PTEN pathway to control T-cell lymphopoiesis in the zebrafish.
Li RA, Traver D, Matthes T, Bertrand JY
Blood128(26)3052-3060(2016 12)

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following FAM49A gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the FAM49A cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
ODa24276	NM_001003606.3 Latest version!	Danio rerio family with sequence similarity 49 member A, like (fam49al), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00
ODa24275	XM_017352223.1 Latest version!	Danio rerio family with sequence similarity 49, member A-like (fam49al), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00
ODa24275	XM_005159614.2 Latest version!	Danio rerio family with sequence similarity 49, member A-like (fam49al), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00
ODa24276	XM_005159616.4 Latest version!	Danio rerio family with sequence similarity 49, member A-like (fam49al), transcript variant X3, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00
View Old Accession Versions >>
ODa24276	XM_005159616.3	Danio rerio family with sequence similarity 49, member A (fam49a), transcript variant X3, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00
Hide Old Accession Versions >>

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

FAM49A ( NM_001003606.3 ) cDNA ORF clone, Danio rerio(Zebrafish) -> NP_001003606.1 Danio rerio family with sequence similarity 49 member A, like (fam49al), mRNA.

Price & Availability↑

CloneID	ODa24276
Clone ID Related Accession (Same CDS sequence)	NM_001003606.3 , XM_005159616.4 , XM_005159616.3
Accession Version	NM_001003606.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 972bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-07
Organism	Danio rerio(zebrafish)
Product	uncharacterized protein LOC445212
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CU463182.4, EH584941.1 and BX950227.8. On Dec 8, 2016 this sequence version replaced NM_001003606.2. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: GFIL01010254.1, BC078262.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END##

ATGGGGAACC TCATTAAGGT CCTTGGCAAG GATTTAGAGA ACTGTCCTCA TTTTTTCCTG 
GATTTCGAAA ATGCTCAGCC CACAGAGGCA GAGACAGCAG TGTATAACCA GGTTAGTGCC 
GTGCTGGAAG AAGCCCATGG GATACTGGCG GAGTTACAGT CTTACAATGG AGCAGGACAA 
GAAATAAGAG AGGCGATTCA GAACCCCAAT GACCTCCAGT TGCAAGAAAA GGCCTGGAAT 
GCGGTCTGCC CCCTGGTGGC CAAACTTAAG AGATTCTATG AGTTTTCTCT CAGGCTAGAG 
AATGCCCTGC GCAGTCTTTT GGAGGCCCTA ACTAGCCCAC CCTATGCTCC CATGCAGCAT 
CTGGAGAGAG AGCAGGCCCT CGCAAAACAG TTCGCAGAGA TCCTGCATTT CACTCTCAGC 
TTTGATGAGC TTAAGATGAC GAATCCAGCC ATACAGAATG ACTTTAGCTA CTATAGGAGG 
ACCATTAGCA GGAATCGGCT GAACAATCAG CAGTTAGAAG CTGAGAACGA GGTGAATAAT 
GAAATGGCCA ATCGGATGTC ACTTTTCTAC GCCGAAGCCA CACCTATGCT CAAAACTTTG 
AGCAATGCCA CAACTAAATT TGTGTCAGAG AACAAGACTT TGCCAATTGA GGACACCACA 
GATTGCCTGA GCACTATGGC CTGCGTGTGC CGTGTCATGT TGGAGACTCC GGAGTACCGG 
TGCCGTTTCA CTAACACAGA CACCATGCTC TTCTGCATGC GTGTGATGGT GGGCGTCATC 
ATCCTTTATG ACCATGTTCA TCCAGTGGGT GCCTTTGCCA AGACCTCCAA GATTGATATG 
AAGGGCTGCA TCAAGGTGTT GAAAGAGCAG CCATCAAACA GCGTGGAGGG ACTGTTGAAT 
GCACTGAGGT ATACGACAAG ACATTTAAAT GATGACAGCA CCTCGAAACA AATCAGGGCC 
CTGCTTCAAT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001003606.1
CDS	481..1452
Translation	MGNLIKVLGKDLENCPHFFLDFENAQPTEAETAVYNQVSAVLEEAHGILAELQSYNGAGQEIREAIQNPNDLQLQEKAWNAVCPLVAKLKRFYEFSLRLENALRSLLEALTSPPYAPMQHLEREQALAKQFAEILHFTLSFDELKMTNPAIQNDFSYYRRTISRNRLNNQQLEAENEVNNEMANRMSLFYAEATPMLKTLSNATTKFVSENKTLPIEDTTDCLSTMACVCRVMLETPEYRCRFTNTDTMLFCMRVMVGVIILYDHVHPVGAFAKTSKIDMKGCIKVLKEQPSNSVEGLLNALRYTTRHLNDDSTSKQIRALLQ

Target ORF information:

RefSeq Version	NM_001003606.3
Organism	Danio rerio(zebrafish)
Definition	Danio rerio family with sequence similarity 49 member A, like (fam49al), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001003606.3

ORF Insert Sequence:

ATGGGGAACC TCATTAAGGT CCTTGGCAAG GATTTAGAGA ACTGTCCTCA TTTTTTCCTG 
GATTTCGAAA ATGCTCAGCC CACAGAGGCA GAGACAGCAG TGTATAACCA GGTTAGTGCC 
GTGCTGGAAG AAGCCCATGG GATACTGGCG GAGTTACAGT CTTACAATGG AGCAGGACAA 
GAAATAAGAG AGGCGATTCA GAACCCCAAT GACCTCCAGT TGCAAGAAAA GGCCTGGAAT 
GCGGTCTGCC CCCTGGTGGC CAAACTTAAG AGATTCTATG AGTTTTCTCT CAGGCTAGAG 
AATGCCCTGC GCAGTCTTTT GGAGGCCCTA ACTAGCCCAC CCTATGCTCC CATGCAGCAT 
CTGGAGAGAG AGCAGGCCCT CGCAAAACAG TTCGCAGAGA TCCTGCATTT CACTCTCAGC 
TTTGATGAGC TTAAGATGAC GAATCCAGCC ATACAGAATG ACTTTAGCTA CTATAGGAGG 
ACCATTAGCA GGAATCGGCT GAACAATCAG CAGTTAGAAG CTGAGAACGA GGTGAATAAT 
GAAATGGCCA ATCGGATGTC ACTTTTCTAC GCCGAAGCCA CACCTATGCT CAAAACTTTG 
AGCAATGCCA CAACTAAATT TGTGTCAGAG AACAAGACTT TGCCAATTGA GGACACCACA 
GATTGCCTGA GCACTATGGC CTGCGTGTGC CGTGTCATGT TGGAGACTCC GGAGTACCGG 
TGCCGTTTCA CTAACACAGA CACCATGCTC TTCTGCATGC GTGTGATGGT GGGCGTCATC 
ATCCTTTATG ACCATGTTCA TCCAGTGGGT GCCTTTGCCA AGACCTCCAA GATTGATATG 
AAGGGCTGCA TCAAGGTGTT GAAAGAGCAG CCATCAAACA GCGTGGAGGG ACTGTTGAAT 
GCACTGAGGT ATACGACAAG ACATTTAAAT GATGACAGCA CCTCGAAACA AATCAGGGCC 
CTGCTTCAAT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

FAM49A ( XM_017352223.1 ) cDNA ORF clone, Danio rerio(Zebrafish) -> XP_017207712.1 Danio rerio family with sequence similarity 49, member A-like (fam49al), transcript variant X2, mRNA.

Price & Availability↑

CloneID	ODa24275
Clone ID Related Accession (Same CDS sequence)	XM_017352223.1 , XM_005159614.2
Accession Version	XM_017352223.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 975bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-06-14
Organism	Danio rerio(zebrafish)
Product	uncharacterized protein LOC445212 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007130.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGGAAATC TCCTGAAACT GCTGGCTTGC ACCGAACTTG AGCATGGTCC AATAGTTTTC 
CTTGACTTTG AACATGCTCA GCCCACAGAG GCAGAGACAG CAGTGTATAA CCAGGTTAGT 
GCCGTGCTGG AAGAAGCCCA TGGGATACTG GCGGAGTTAC AGTCTTACAA TGGAGCAGGA 
CAAGAAATAA GAGAGGCGAT TCAGAACCCC AATGACCTCC AGTTGCAAGA AAAGGCCTGG 
AATGCGGTCT GCCCCCTGGT GGCCAAACTT AAGAGATTCT ATGAGTTTTC TCTCAGGCTA 
GAGAATGCCC TGCGCAGTCT TTTGGAGGCC CTAACTAGCC CACCCTATGC TCCCATGCAG 
CATCTGGAGA GAGAGCAGGC CCTCGCAAAA CAGTTCGCAG AGATCCTGCA TTTCACTCTC 
AGCTTTGATG AGCTTAAGAT GACGAATCCA GCCATACAGA ATGACTTTAG CTACTATAGG 
AGGACCATTA GCAGGAATCG GCTGAACAAT CAGCAGTTAG AAGCTGAGAA CGAGGTGAAT 
AATGAAATGG CCAATCGGAT GTCACTTTTC TACGCCGAAG CCACACCTAT GCTCAAAACT 
TTGAGCAATG CCACAACTAA ATTTGTGTCA GAGAACAAGA CTTTGCCAAT TGAGGACACC 
ACAGATTGCC TGAGCACTAT GGCCTGCGTG TGCCGTGTCA TGTTGGAGAC TCCGGAGTAC 
CGGTGCCGTT TCACTAACAC AGACACCATG CTCTTCTGCA TGCGTGTGAT GGTGGGCGTC 
ATCATCCTTT ATGACCATGT TCATCCAGTG GGTGCCTTTG CCAAGACCTC CAAGATTGAT 
ATGAAGGGCT GCATCAAGGT GTTGAAAGAG CAGCCATCAA ACAGCGTGGA GGGACTGTTG 
AATGCACTGA GGTATACGAC AAGACATTTA AATGATGACA GCACCTCGAA ACAAATCAGG 
GCCCTGCTTC AATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_017207712.1
CDS	472..1446
Translation	MGNLLKLLACTELEHGPIVFLDFEHAQPTEAETAVYNQVSAVLEEAHGILAELQSYNGAGQEIREAIQNPNDLQLQEKAWNAVCPLVAKLKRFYEFSLRLENALRSLLEALTSPPYAPMQHLEREQALAKQFAEILHFTLSFDELKMTNPAIQNDFSYYRRTISRNRLNNQQLEAENEVNNEMANRMSLFYAEATPMLKTLSNATTKFVSENKTLPIEDTTDCLSTMACVCRVMLETPEYRCRFTNTDTMLFCMRVMVGVIILYDHVHPVGAFAKTSKIDMKGCIKVLKEQPSNSVEGLLNALRYTTRHLNDDSTSKQIRALLQ

Target ORF information:

RefSeq Version	XM_017352223.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio family with sequence similarity 49, member A-like (fam49al), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_017352223.1

ORF Insert Sequence:

ATGGGAAATC TCCTGAAACT GCTGGCTTGC ACCGAACTTG AGCATGGTCC AATAGTTTTC 
CTTGACTTTG AACATGCTCA GCCCACAGAG GCAGAGACAG CAGTGTATAA CCAGGTTAGT 
GCCGTGCTGG AAGAAGCCCA TGGGATACTG GCGGAGTTAC AGTCTTACAA TGGAGCAGGA 
CAAGAAATAA GAGAGGCGAT TCAGAACCCC AATGACCTCC AGTTGCAAGA AAAGGCCTGG 
AATGCGGTCT GCCCCCTGGT GGCCAAACTT AAGAGATTCT ATGAGTTTTC TCTCAGGCTA 
GAGAATGCCC TGCGCAGTCT TTTGGAGGCC CTAACTAGCC CACCCTATGC TCCCATGCAG 
CATCTGGAGA GAGAGCAGGC CCTCGCAAAA CAGTTCGCAG AGATCCTGCA TTTCACTCTC 
AGCTTTGATG AGCTTAAGAT GACGAATCCA GCCATACAGA ATGACTTTAG CTACTATAGG 
AGGACCATTA GCAGGAATCG GCTGAACAAT CAGCAGTTAG AAGCTGAGAA CGAGGTGAAT 
AATGAAATGG CCAATCGGAT GTCACTTTTC TACGCCGAAG CCACACCTAT GCTCAAAACT 
TTGAGCAATG CCACAACTAA ATTTGTGTCA GAGAACAAGA CTTTGCCAAT TGAGGACACC 
ACAGATTGCC TGAGCACTAT GGCCTGCGTG TGCCGTGTCA TGTTGGAGAC TCCGGAGTAC 
CGGTGCCGTT TCACTAACAC AGACACCATG CTCTTCTGCA TGCGTGTGAT GGTGGGCGTC 
ATCATCCTTT ATGACCATGT TCATCCAGTG GGTGCCTTTG CCAAGACCTC CAAGATTGAT 
ATGAAGGGCT GCATCAAGGT GTTGAAAGAG CAGCCATCAA ACAGCGTGGA GGGACTGTTG 
AATGCACTGA GGTATACGAC AAGACATTTA AATGATGACA GCACCTCGAA ACAAATCAGG 
GCCCTGCTTC AATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

FAM49A ( XM_005159614.2 ) cDNA ORF clone, Danio rerio(Zebrafish) -> XP_005159671.1 Danio rerio family with sequence similarity 49, member A-like (fam49al), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ODa24275
Clone ID Related Accession (Same CDS sequence)	XM_017352223.1 , XM_005159614.2
Accession Version	XM_005159614.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 975bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-06-14
Organism	Danio rerio(zebrafish)
Product	uncharacterized protein LOC445212 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007130.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 24, 2014 this sequence version replaced XM_005159614.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGGAAATC TCCTGAAACT GCTGGCTTGC ACCGAACTTG AGCATGGTCC AATAGTTTTC 
CTTGACTTTG AACATGCTCA GCCCACAGAG GCAGAGACAG CAGTGTATAA CCAGGTTAGT 
GCCGTGCTGG AAGAAGCCCA TGGGATACTG GCGGAGTTAC AGTCTTACAA TGGAGCAGGA 
CAAGAAATAA GAGAGGCGAT TCAGAACCCC AATGACCTCC AGTTGCAAGA AAAGGCCTGG 
AATGCGGTCT GCCCCCTGGT GGCCAAACTT AAGAGATTCT ATGAGTTTTC TCTCAGGCTA 
GAGAATGCCC TGCGCAGTCT TTTGGAGGCC CTAACTAGCC CACCCTATGC TCCCATGCAG 
CATCTGGAGA GAGAGCAGGC CCTCGCAAAA CAGTTCGCAG AGATCCTGCA TTTCACTCTC 
AGCTTTGATG AGCTTAAGAT GACGAATCCA GCCATACAGA ATGACTTTAG CTACTATAGG 
AGGACCATTA GCAGGAATCG GCTGAACAAT CAGCAGTTAG AAGCTGAGAA CGAGGTGAAT 
AATGAAATGG CCAATCGGAT GTCACTTTTC TACGCCGAAG CCACACCTAT GCTCAAAACT 
TTGAGCAATG CCACAACTAA ATTTGTGTCA GAGAACAAGA CTTTGCCAAT TGAGGACACC 
ACAGATTGCC TGAGCACTAT GGCCTGCGTG TGCCGTGTCA TGTTGGAGAC TCCGGAGTAC 
CGGTGCCGTT TCACTAACAC AGACACCATG CTCTTCTGCA TGCGTGTGAT GGTGGGCGTC 
ATCATCCTTT ATGACCATGT TCATCCAGTG GGTGCCTTTG CCAAGACCTC CAAGATTGAT 
ATGAAGGGCT GCATCAAGGT GTTGAAAGAG CAGCCATCAA ACAGCGTGGA GGGACTGTTG 
AATGCACTGA GGTATACGAC AAGACATTTA AATGATGACA GCACCTCGAA ACAAATCAGG 
GCCCTGCTTC AATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_005159671.1
CDS	553..1527
Translation	MGNLLKLLACTELEHGPIVFLDFEHAQPTEAETAVYNQVSAVLEEAHGILAELQSYNGAGQEIREAIQNPNDLQLQEKAWNAVCPLVAKLKRFYEFSLRLENALRSLLEALTSPPYAPMQHLEREQALAKQFAEILHFTLSFDELKMTNPAIQNDFSYYRRTISRNRLNNQQLEAENEVNNEMANRMSLFYAEATPMLKTLSNATTKFVSENKTLPIEDTTDCLSTMACVCRVMLETPEYRCRFTNTDTMLFCMRVMVGVIILYDHVHPVGAFAKTSKIDMKGCIKVLKEQPSNSVEGLLNALRYTTRHLNDDSTSKQIRALLQ

Target ORF information:

RefSeq Version	XM_005159614.2
Organism	Danio rerio(zebrafish)
Definition	Danio rerio family with sequence similarity 49, member A-like (fam49al), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_005159614.2

ORF Insert Sequence:

ATGGGAAATC TCCTGAAACT GCTGGCTTGC ACCGAACTTG AGCATGGTCC AATAGTTTTC 
CTTGACTTTG AACATGCTCA GCCCACAGAG GCAGAGACAG CAGTGTATAA CCAGGTTAGT 
GCCGTGCTGG AAGAAGCCCA TGGGATACTG GCGGAGTTAC AGTCTTACAA TGGAGCAGGA 
CAAGAAATAA GAGAGGCGAT TCAGAACCCC AATGACCTCC AGTTGCAAGA AAAGGCCTGG 
AATGCGGTCT GCCCCCTGGT GGCCAAACTT AAGAGATTCT ATGAGTTTTC TCTCAGGCTA 
GAGAATGCCC TGCGCAGTCT TTTGGAGGCC CTAACTAGCC CACCCTATGC TCCCATGCAG 
CATCTGGAGA GAGAGCAGGC CCTCGCAAAA CAGTTCGCAG AGATCCTGCA TTTCACTCTC 
AGCTTTGATG AGCTTAAGAT GACGAATCCA GCCATACAGA ATGACTTTAG CTACTATAGG 
AGGACCATTA GCAGGAATCG GCTGAACAAT CAGCAGTTAG AAGCTGAGAA CGAGGTGAAT 
AATGAAATGG CCAATCGGAT GTCACTTTTC TACGCCGAAG CCACACCTAT GCTCAAAACT 
TTGAGCAATG CCACAACTAA ATTTGTGTCA GAGAACAAGA CTTTGCCAAT TGAGGACACC 
ACAGATTGCC TGAGCACTAT GGCCTGCGTG TGCCGTGTCA TGTTGGAGAC TCCGGAGTAC 
CGGTGCCGTT TCACTAACAC AGACACCATG CTCTTCTGCA TGCGTGTGAT GGTGGGCGTC 
ATCATCCTTT ATGACCATGT TCATCCAGTG GGTGCCTTTG CCAAGACCTC CAAGATTGAT 
ATGAAGGGCT GCATCAAGGT GTTGAAAGAG CAGCCATCAA ACAGCGTGGA GGGACTGTTG 
AATGCACTGA GGTATACGAC AAGACATTTA AATGATGACA GCACCTCGAA ACAAATCAGG 
GCCCTGCTTC AATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

FAM49A ( XM_005159616.4 ) cDNA ORF clone, Danio rerio(Zebrafish) -> XP_005159673.1 Danio rerio family with sequence similarity 49, member A-like (fam49al), transcript variant X3, mRNA.

Price & Availability↑

CloneID	ODa24276
Clone ID Related Accession (Same CDS sequence)	NM_001003606.3 , XM_005159616.4 , XM_005159616.3
Accession Version	XM_005159616.4 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 972bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-06-14
Organism	Danio rerio(zebrafish)
Product	uncharacterized protein LOC445212 isoform X2
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007130.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_005159616.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGGGAACC TCATTAAGGT CCTTGGCAAG GATTTAGAGA ACTGTCCTCA TTTTTTCCTG 
GATTTCGAAA ATGCTCAGCC CACAGAGGCA GAGACAGCAG TGTATAACCA GGTTAGTGCC 
GTGCTGGAAG AAGCCCATGG GATACTGGCG GAGTTACAGT CTTACAATGG AGCAGGACAA 
GAAATAAGAG AGGCGATTCA GAACCCCAAT GACCTCCAGT TGCAAGAAAA GGCCTGGAAT 
GCGGTCTGCC CCCTGGTGGC CAAACTTAAG AGATTCTATG AGTTTTCTCT CAGGCTAGAG 
AATGCCCTGC GCAGTCTTTT GGAGGCCCTA ACTAGCCCAC CCTATGCTCC CATGCAGCAT 
CTGGAGAGAG AGCAGGCCCT CGCAAAACAG TTCGCAGAGA TCCTGCATTT CACTCTCAGC 
TTTGATGAGC TTAAGATGAC GAATCCAGCC ATACAGAATG ACTTTAGCTA CTATAGGAGG 
ACCATTAGCA GGAATCGGCT GAACAATCAG CAGTTAGAAG CTGAGAACGA GGTGAATAAT 
GAAATGGCCA ATCGGATGTC ACTTTTCTAC GCCGAAGCCA CACCTATGCT CAAAACTTTG 
AGCAATGCCA CAACTAAATT TGTGTCAGAG AACAAGACTT TGCCAATTGA GGACACCACA 
GATTGCCTGA GCACTATGGC CTGCGTGTGC CGTGTCATGT TGGAGACTCC GGAGTACCGG 
TGCCGTTTCA CTAACACAGA CACCATGCTC TTCTGCATGC GTGTGATGGT GGGCGTCATC 
ATCCTTTATG ACCATGTTCA TCCAGTGGGT GCCTTTGCCA AGACCTCCAA GATTGATATG 
AAGGGCTGCA TCAAGGTGTT GAAAGAGCAG CCATCAAACA GCGTGGAGGG ACTGTTGAAT 
GCACTGAGGT ATACGACAAG ACATTTAAAT GATGACAGCA CCTCGAAACA AATCAGGGCC 
CTGCTTCAAT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_005159673.1
CDS	251..1222
Translation	MGNLIKVLGKDLENCPHFFLDFENAQPTEAETAVYNQVSAVLEEAHGILAELQSYNGAGQEIREAIQNPNDLQLQEKAWNAVCPLVAKLKRFYEFSLRLENALRSLLEALTSPPYAPMQHLEREQALAKQFAEILHFTLSFDELKMTNPAIQNDFSYYRRTISRNRLNNQQLEAENEVNNEMANRMSLFYAEATPMLKTLSNATTKFVSENKTLPIEDTTDCLSTMACVCRVMLETPEYRCRFTNTDTMLFCMRVMVGVIILYDHVHPVGAFAKTSKIDMKGCIKVLKEQPSNSVEGLLNALRYTTRHLNDDSTSKQIRALLQ

Target ORF information:

RefSeq Version	XM_005159616.4
Organism	Danio rerio(zebrafish)
Definition	Danio rerio family with sequence similarity 49, member A-like (fam49al), transcript variant X3, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_005159616.4

ORF Insert Sequence:

ATGGGGAACC TCATTAAGGT CCTTGGCAAG GATTTAGAGA ACTGTCCTCA TTTTTTCCTG 
GATTTCGAAA ATGCTCAGCC CACAGAGGCA GAGACAGCAG TGTATAACCA GGTTAGTGCC 
GTGCTGGAAG AAGCCCATGG GATACTGGCG GAGTTACAGT CTTACAATGG AGCAGGACAA 
GAAATAAGAG AGGCGATTCA GAACCCCAAT GACCTCCAGT TGCAAGAAAA GGCCTGGAAT 
GCGGTCTGCC CCCTGGTGGC CAAACTTAAG AGATTCTATG AGTTTTCTCT CAGGCTAGAG 
AATGCCCTGC GCAGTCTTTT GGAGGCCCTA ACTAGCCCAC CCTATGCTCC CATGCAGCAT 
CTGGAGAGAG AGCAGGCCCT CGCAAAACAG TTCGCAGAGA TCCTGCATTT CACTCTCAGC 
TTTGATGAGC TTAAGATGAC GAATCCAGCC ATACAGAATG ACTTTAGCTA CTATAGGAGG 
ACCATTAGCA GGAATCGGCT GAACAATCAG CAGTTAGAAG CTGAGAACGA GGTGAATAAT 
GAAATGGCCA ATCGGATGTC ACTTTTCTAC GCCGAAGCCA CACCTATGCT CAAAACTTTG 
AGCAATGCCA CAACTAAATT TGTGTCAGAG AACAAGACTT TGCCAATTGA GGACACCACA 
GATTGCCTGA GCACTATGGC CTGCGTGTGC CGTGTCATGT TGGAGACTCC GGAGTACCGG 
TGCCGTTTCA CTAACACAGA CACCATGCTC TTCTGCATGC GTGTGATGGT GGGCGTCATC 
ATCCTTTATG ACCATGTTCA TCCAGTGGGT GCCTTTGCCA AGACCTCCAA GATTGATATG 
AAGGGCTGCA TCAAGGTGTT GAAAGAGCAG CCATCAAACA GCGTGGAGGG ACTGTTGAAT 
GCACTGAGGT ATACGACAAG ACATTTAAAT GATGACAGCA CCTCGAAACA AATCAGGGCC 
CTGCTTCAAT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

FAM49A ( XM_005159616.3 ) cDNA ORF clone, Danio rerio(Zebrafish) -> XP_005159673.1 Danio rerio family with sequence similarity 49, member A (fam49a), transcript variant X3, mRNA.

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CloneID	ODa24276
Clone ID Related Accession (Same CDS sequence)	NM_001003606.3 , XM_005159616.4 , XM_005159616.3
Accession Version	XM_005159616.3	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 972bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-06-23
Organism	Danio rerio(Zebrafish)
Product	uncharacterized protein LOC445212 isoform X2
Comment	MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007130.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_005159616.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGGGAACC TCATTAAGGT CCTTGGCAAG GATTTAGAGA ACTGTCCTCA TTTTTTCCTG 
GATTTCGAAA ATGCTCAGCC CACAGAGGCA GAGACAGCAG TGTATAACCA GGTTAGTGCC 
GTGCTGGAAG AAGCCCATGG GATACTGGCG GAGTTACAGT CTTACAATGG AGCAGGACAA 
GAAATAAGAG AGGCGATTCA GAACCCCAAT GACCTCCAGT TGCAAGAAAA GGCCTGGAAT 
GCGGTCTGCC CCCTGGTGGC CAAACTTAAG AGATTCTATG AGTTTTCTCT CAGGCTAGAG 
AATGCCCTGC GCAGTCTTTT GGAGGCCCTA ACTAGCCCAC CCTATGCTCC CATGCAGCAT 
CTGGAGAGAG AGCAGGCCCT CGCAAAACAG TTCGCAGAGA TCCTGCATTT CACTCTCAGC 
TTTGATGAGC TTAAGATGAC GAATCCAGCC ATACAGAATG ACTTTAGCTA CTATAGGAGG 
ACCATTAGCA GGAATCGGCT GAACAATCAG CAGTTAGAAG CTGAGAACGA GGTGAATAAT 
GAAATGGCCA ATCGGATGTC ACTTTTCTAC GCCGAAGCCA CACCTATGCT CAAAACTTTG 
AGCAATGCCA CAACTAAATT TGTGTCAGAG AACAAGACTT TGCCAATTGA GGACACCACA 
GATTGCCTGA GCACTATGGC CTGCGTGTGC CGTGTCATGT TGGAGACTCC GGAGTACCGG 
TGCCGTTTCA CTAACACAGA CACCATGCTC TTCTGCATGC GTGTGATGGT GGGCGTCATC 
ATCCTTTATG ACCATGTTCA TCCAGTGGGT GCCTTTGCCA AGACCTCCAA GATTGATATG 
AAGGGCTGCA TCAAGGTGTT GAAAGAGCAG CCATCAAACA GCGTGGAGGG ACTGTTGAAT 
GCACTGAGGT ATACGACAAG ACATTTAAAT GATGACAGCA CCTCGAAACA AATCAGGGCC 
CTGCTTCAAT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_005159673.1
CDS	268..1239
Translation	MGNLIKVLGKDLENCPHFFLDFENAQPTEAETAVYNQVSAVLEEAHGILAELQSYNGAGQEIREAIQNPNDLQLQEKAWNAVCPLVAKLKRFYEFSLRLENALRSLLEALTSPPYAPMQHLEREQALAKQFAEILHFTLSFDELKMTNPAIQNDFSYYRRTISRNRLNNQQLEAENEVNNEMANRMSLFYAEATPMLKTLSNATTKFVSENKTLPIEDTTDCLSTMACVCRVMLETPEYRCRFTNTDTMLFCMRVMVGVIILYDHVHPVGAFAKTSKIDMKGCIKVLKEQPSNSVEGLLNALRYTTRHLNDDSTSKQIRALLQ

Target ORF information:

RefSeq Version	XM_005159616.3
Organism	Danio rerio(Zebrafish)
Definition	Danio rerio family with sequence similarity 49, member A (fam49a), transcript variant X3, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_005159616.3

ORF Insert Sequence:

ATGGGGAACC TCATTAAGGT CCTTGGCAAG GATTTAGAGA ACTGTCCTCA TTTTTTCCTG 
GATTTCGAAA ATGCTCAGCC CACAGAGGCA GAGACAGCAG TGTATAACCA GGTTAGTGCC 
GTGCTGGAAG AAGCCCATGG GATACTGGCG GAGTTACAGT CTTACAATGG AGCAGGACAA 
GAAATAAGAG AGGCGATTCA GAACCCCAAT GACCTCCAGT TGCAAGAAAA GGCCTGGAAT 
GCGGTCTGCC CCCTGGTGGC CAAACTTAAG AGATTCTATG AGTTTTCTCT CAGGCTAGAG 
AATGCCCTGC GCAGTCTTTT GGAGGCCCTA ACTAGCCCAC CCTATGCTCC CATGCAGCAT 
CTGGAGAGAG AGCAGGCCCT CGCAAAACAG TTCGCAGAGA TCCTGCATTT CACTCTCAGC 
TTTGATGAGC TTAAGATGAC GAATCCAGCC ATACAGAATG ACTTTAGCTA CTATAGGAGG 
ACCATTAGCA GGAATCGGCT GAACAATCAG CAGTTAGAAG CTGAGAACGA GGTGAATAAT 
GAAATGGCCA ATCGGATGTC ACTTTTCTAC GCCGAAGCCA CACCTATGCT CAAAACTTTG 
AGCAATGCCA CAACTAAATT TGTGTCAGAG AACAAGACTT TGCCAATTGA GGACACCACA 
GATTGCCTGA GCACTATGGC CTGCGTGTGC CGTGTCATGT TGGAGACTCC GGAGTACCGG 
TGCCGTTTCA CTAACACAGA CACCATGCTC TTCTGCATGC GTGTGATGGT GGGCGTCATC 
ATCCTTTATG ACCATGTTCA TCCAGTGGGT GCCTTTGCCA AGACCTCCAA GATTGATATG 
AAGGGCTGCA TCAAGGTGTT GAAAGAGCAG CCATCAAACA GCGTGGAGGG ACTGTTGAAT 
GCACTGAGGT ATACGACAAG ACATTTAAAT GATGACAGCA CCTCGAAACA AATCAGGGCC 
CTGCTTCAAT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Evolution of complexity in the zebrafish synapse proteome.
Nature communications814613(2017 Mar)
Bay?s ?,Collins MO,Reig-Viader R,Gou G,Goulding D,Izquierdo A,Choudhary JS,Emes RD,Grant SG

Ndrg1b and fam49ab modulate the PTEN pathway to control T-cell lymphopoiesis in the zebrafish.
Blood128(26)3052-3060(2016 12)
Li RA,Traver D,Matthes T,Bertrand JY

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

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FAM49A cDNA ORF clone, Danio rerio(Zebrafish)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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