Gene Symbol | cla-1 |
Entrez Gene ID | 177539 |
Full Name | CLArinet, functional homolog of cytomatrix at the active zone proteins piccolo and fife |
Gene Type | protein-coding |
Organism | Caenorhabditis elegans |
ORF » Species Summary » Caenorhabditis elegans » cla-1 cDNA ORF clone
Gene Symbol | cla-1 |
Entrez Gene ID | 177539 |
Full Name | CLArinet, functional homolog of cytomatrix at the active zone proteins piccolo and fife |
Gene Type | protein-coding |
Organism | Caenorhabditis elegans |
mRNA | Protein | Name |
---|---|---|
NM_001307220.2 | NP_001294149.2 | Protein clarinet |
NM_001307214.1 | NP_001294143.1 | Protein clarinet |
NM_068836.3 | NP_501237.1 | Protein clarinet |
NM_068837.3 | NP_501238.1 | Protein clarinet |
NM_001307220.3 | NP_001294149.2 | Protein clarinet |
NM_001307215.1 | NP_001294144.1 | Protein clarinet |
NM_001307219.3 | NP_001294148.2 | Protein clarinet |
NM_001307215.2 | NP_001294144.1 | Protein clarinet |
NM_068837.4 | NP_501238.1 | Protein clarinet |
NM_001307219.2 | NP_001294148.2 | Protein clarinet |
NM_068836.4 | NP_501237.1 | Protein clarinet |
NM_001307214.2 | NP_001294143.1 | Protein clarinet |
Genome sequence of the nematode C. elegans: a platform for investigating biology.
Science (New York, N.Y.)282(5396)2012-8(1998 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following cla-1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the cla-1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OCa353418 | |
Clone ID Related Accession (Same CDS sequence) | NM_068837.3 , NM_068837.4 | |
Accession Version | NM_068837.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2511bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-08 | |
Organism | Caenorhabditis elegans | |
Product | Protein clarinet | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003282). On Jun 26, 2012 this sequence version replaced NM_068837.2. COMPLETENESS: incomplete on both ends. |
1 | ATGGGCCGCC GAAAACTTCC ATCTATTCCA CCTAATTCGT CGGCGTTCCC ACCGCCAACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_501238.1 |
CDS | 1..2511 |
Translation |
Target ORF information:
Target ORF information:
|
NM_068837.3 |
1 | ATGGGCCGCC GAAAACTTCC ATCTATTCCA CCTAATTCGT CGGCGTTCCC ACCGCCAACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OCa353418 | |
Clone ID Related Accession (Same CDS sequence) | NM_068837.3 , NM_068837.4 | |
Accession Version | NM_068837.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2511bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-17 | |
Organism | Caenorhabditis elegans | |
Product | Protein clarinet | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003282). On Sep 4, 2019 this sequence version replaced NM_068837.3. |
1 | ATGGGCCGCC GAAAACTTCC ATCTATTCCA CCTAATTCGT CGGCGTTCCC ACCGCCAACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_501238.1 |
CDS | 189..2699 |
Translation |
Target ORF information:
Target ORF information:
|
NM_068837.4 |
1 | ATGGGCCGCC GAAAACTTCC ATCTATTCCA CCTAATTCGT CGGCGTTCCC ACCGCCAACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OCa353417 | |
Clone ID Related Accession (Same CDS sequence) | NM_068836.3 , NM_068836.4 | |
Accession Version | NM_068836.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3696bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-08 | |
Organism | Caenorhabditis elegans | |
Product | Protein clarinet | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003282). On Jun 26, 2012 this sequence version replaced NM_068836.2. COMPLETENESS: incomplete on both ends. |
1 | ATGGGCCGCC GAAAACTTCC ATCTATTCCA CCTAATTCGT CGGCGTTCCC ACCGCCAACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_501237.1 |
CDS | 1..3696 |
Translation |
Target ORF information:
Target ORF information:
|
NM_068836.3 |
1 | ATGGGCCGCC GAAAACTTCC ATCTATTCCA CCTAATTCGT CGGCGTTCCC ACCGCCAACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OCa353417 | |
Clone ID Related Accession (Same CDS sequence) | NM_068836.3 , NM_068836.4 | |
Accession Version | NM_068836.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3696bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-17 | |
Organism | Caenorhabditis elegans | |
Product | Protein clarinet | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003282). On Sep 4, 2019 this sequence version replaced NM_068836.3. |
1 | ATGGGCCGCC GAAAACTTCC ATCTATTCCA CCTAATTCGT CGGCGTTCCC ACCGCCAACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_501237.1 |
CDS | 189..3884 |
Translation |
Target ORF information:
Target ORF information:
|
NM_068836.4 |
1 | ATGGGCCGCC GAAAACTTCC ATCTATTCCA CCTAATTCGT CGGCGTTCCC ACCGCCAACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OCa353415 | |
Clone ID Related Accession (Same CDS sequence) | NM_001307215.1 , NM_001307215.2 | |
Accession Version | NM_001307215.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 7929bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-17 | |
Organism | Caenorhabditis elegans | |
Product | Protein clarinet | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003282). On Sep 4, 2019 this sequence version replaced NM_001307215.1. COMPLETENESS: incomplete on the 5' end. |
1 | ATGGCGTCAC GGAAGAGTAG TGAATACGAC ATTAGAAGTA TATCAGAGAT TAGGCAAGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001294144.1 |
CDS | 1..7929 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001307215.2 |
1 | ATGGCGTCAC GGAAGAGTAG TGAATACGAC ATTAGAAGTA TATCAGAGAT TAGGCAAGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OCa353416 | |
Clone ID Related Accession (Same CDS sequence) | NM_001307214.1 , NM_001307214.2 | |
Accession Version | NM_001307214.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 6744bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-17 | |
Organism | Caenorhabditis elegans | |
Product | Protein clarinet | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003282). On Sep 4, 2019 this sequence version replaced NM_001307214.1. COMPLETENESS: incomplete on the 5' end. |
1 | ATGGCGTCAC GGAAGAGTAG TGAATACGAC ATTAGAAGTA TATCAGAGAT TAGGCAAGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001294143.1 |
CDS | 1..6744 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001307214.2 |
1 | ATGGCGTCAC GGAAGAGTAG TGAATACGAC ATTAGAAGTA TATCAGAGAT TAGGCAAGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OCa353413 | |
Clone ID Related Accession (Same CDS sequence) | NM_001307219.3 , NM_001307219.2 | |
Accession Version | NM_001307219.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 26769bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-17 | |
Organism | Caenorhabditis elegans | |
Product | Protein clarinet | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003282). On Sep 4, 2019 this sequence version replaced NM_001307219.2. COMPLETENESS: incomplete on the 5' end. |
1 | ATGTCATCCT GGTTTTCATA TTTTGGATTC AGTAAAGGTC CACCTCTGGA AGAGGTAAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001294148.2 |
CDS | 1..26769 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001307219.3 |
1 | ATGTCATCCT GGTTTTCATA TTTTGGATTC AGTAAAGGTC CACCTCTGGA AGAGGTAAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OCa353413 | |
Clone ID Related Accession (Same CDS sequence) | NM_001307219.3 , NM_001307219.2 | |
Accession Version | NM_001307219.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 26769bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-08 | |
Organism | Caenorhabditis elegans | |
Product | Protein clarinet | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003282). On Aug 25, 2015 this sequence version replaced NM_001307219.1. COMPLETENESS: incomplete on both ends. |
1 | ATGTCATCCT GGTTTTCATA TTTTGGATTC AGTAAAGGTC CACCTCTGGA AGAGGTAAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001294148.2 |
CDS | 1..26769 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001307219.2 |
1 | ATGTCATCCT GGTTTTCATA TTTTGGATTC AGTAAAGGTC CACCTCTGGA AGAGGTAAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OCa353414 | |
Clone ID Related Accession (Same CDS sequence) | NM_001307220.2 , NM_001307220.3 | |
Accession Version | NM_001307220.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 25584bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-08 | |
Organism | Caenorhabditis elegans | |
Product | Protein clarinet | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003282). On Aug 25, 2015 this sequence version replaced NM_001307220.1. COMPLETENESS: incomplete on both ends. |
1 | ATGTCATCCT GGTTTTCATA TTTTGGATTC AGTAAAGGTC CACCTCTGGA AGAGGTAAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001294149.2 |
CDS | 1..25584 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001307220.2 |
1 | ATGTCATCCT GGTTTTCATA TTTTGGATTC AGTAAAGGTC CACCTCTGGA AGAGGTAAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OCa353414 | |
Clone ID Related Accession (Same CDS sequence) | NM_001307220.2 , NM_001307220.3 | |
Accession Version | NM_001307220.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 25584bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-17 | |
Organism | Caenorhabditis elegans | |
Product | Protein clarinet | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003282). On Sep 4, 2019 this sequence version replaced NM_001307220.2. COMPLETENESS: incomplete on the 5' end. |
1 | ATGTCATCCT GGTTTTCATA TTTTGGATTC AGTAAAGGTC CACCTCTGGA AGAGGTAAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001294149.2 |
CDS | 1..25584 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001307220.3 |
1 | ATGTCATCCT GGTTTTCATA TTTTGGATTC AGTAAAGGTC CACCTCTGGA AGAGGTAAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OCa353415 | |
Clone ID Related Accession (Same CDS sequence) | NM_001307215.1 , NM_001307215.2 | |
Accession Version | NM_001307215.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 7929bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-08 | |
Organism | Caenorhabditis elegans | |
Product | Protein clarinet | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003282). COMPLETENESS: incomplete on both ends. |
1 | ATGGCGTCAC GGAAGAGTAG TGAATACGAC ATTAGAAGTA TATCAGAGAT TAGGCAAGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001294144.1 |
CDS | 1..7929 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001307215.1 |
1 | ATGGCGTCAC GGAAGAGTAG TGAATACGAC ATTAGAAGTA TATCAGAGAT TAGGCAAGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OCa353416 | |
Clone ID Related Accession (Same CDS sequence) | NM_001307214.1 , NM_001307214.2 | |
Accession Version | NM_001307214.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 6744bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-08 | |
Organism | Caenorhabditis elegans | |
Product | Protein clarinet | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003282). COMPLETENESS: incomplete on both ends. |
1 | ATGGCGTCAC GGAAGAGTAG TGAATACGAC ATTAGAAGTA TATCAGAGAT TAGGCAAGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001294143.1 |
CDS | 1..6744 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001307214.1 |
1 | ATGGCGTCAC GGAAGAGTAG TGAATACGAC ATTAGAAGTA TATCAGAGAT TAGGCAAGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Genome sequence of the nematode C. elegans: a platform for investigating biology. |