Gene Symbol | LOC4349562 |
Entrez Gene ID | 4349562 |
Full Name | uncharacterized LOC4349562 |
Gene Type | protein-coding |
Organism | Oryza sativa Japonica Group(Japanese rice) |
ORF » Species Summary » Oryza sativa Japonica Group » LOC4349562 cDNA ORF clone
Gene Symbol | LOC4349562 |
Entrez Gene ID | 4349562 |
Full Name | uncharacterized LOC4349562 |
Gene Type | protein-coding |
Organism | Oryza sativa Japonica Group(Japanese rice) |
mRNA | Protein | Name |
---|---|---|
XM_026021506.1 | XP_025877291.1 | uncharacterized LOC4349562 isoform X1 |
XM_015760592.1 | XP_015616078.1 | uncharacterized protein LOC4349562 |
NM_001363638.1 | NP_001350567.1 | uncharacterized LOC4349562 |
XM_026021507.1 | XP_025877292.1 | uncharacterized LOC4349562 isoform X2 |
Arabidopsis thaliana (thale cress) | NFD4 | NP_174432.2 |
Arabidopsis thaliana (thale cress) | AT5G45275 | NP_974886.1 |
Oryza sativa (rice) | Os11g0107400 | NP_001065544.1 |
Arabidopsis thaliana (thale cress) | AT3G01630 | NP_186812.2 |
Arabidopsis thaliana (thale cress) | AT4G19450 | NP_567588.1 |
Oryza sativa (rice) | Os12g0106500 | NP_001065940.2 |
Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
, , Kikuchi S, Satoh K, Nagata T, Kawagashira N, Doi K, Kishimoto N, Yazaki J, Ishikawa M, Yamada H, Ooka H, Hotta I, Kojima K, Namiki T, Ohneda E, Yahagi W, Suzuki K, Li CJ, Ohtsuki K, Shishiki T, , Otomo Y, Murakami K, Iida Y, Sugano S, Fujimura T, Suzuki Y, Tsunoda Y, Kurosaki T, Kodama T, Masuda H, Kobayashi M, Xie Q, Lu M, Narikawa R, Sugiyama A, Mizuno K, Yokomizo S, Niikura J, Ikeda R, Ishibiki J, Kawamata M, Yoshimura A, Miura J, Kusumegi T, Oka M, Ryu R, Ueda M, Matsubara K, , Kawai J, Carninci P, Adachi J, Aizawa K, Arakawa T, Fukuda S, Hara A, Hashizume W, Hayatsu N, Imotani K, Ishii Y, Itoh M, Kagawa I, Kondo S, Konno H, Miyazaki A, Osato N, Ota Y, Saito R, Sasaki D, Sato K, Shibata K, Shinagawa A, Shiraki T, Yoshino M, Hayashizaki Y, Yasunishi A
Science (New York, N.Y.)301(5631)376-9(2003 Jul)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following LOC4349562 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC4349562 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OOa21370 | |
Clone ID Related Accession (Same CDS sequence) | XM_026021506.1 , NM_001363638.1 | |
Accession Version | NM_001363638.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1755bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-05-04 | |
Organism | Oryza sativa Japonica Group(Japanese rice) | |
Product | uncharacterized LOC4349562 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AP014967.1 and AK065945.1. ##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMD00008650, SAMD00020320 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGAGCGGT CGACGACGAC GACGACGGAG CAGCAGCAGC AGCAGCAGCA GGGGCGGAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001350567.1 |
CDS | 315..2069 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001363638.1 |
1 | ATGGAGCGGT CGACGACGAC GACGACGGAG CAGCAGCAGC AGCAGCAGCA GGGGCGGAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OOa21370 | |
Clone ID Related Accession (Same CDS sequence) | XM_026021506.1 , NM_001363638.1 | |
Accession Version | XM_026021506.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1755bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-08-06 | |
Organism | Oryza sativa Japonica Group(Japanese rice) | |
Product | uncharacterized LOC4349562 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_029266.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Oryza sativa Japonica Group Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAGCGGT CGACGACGAC GACGACGGAG CAGCAGCAGC AGCAGCAGCA GGGGCGGAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_025877291.1 |
CDS | 330..2084 |
Translation |
Target ORF information:
Target ORF information:
|
XM_026021506.1 |
1 | ATGGAGCGGT CGACGACGAC GACGACGGAG CAGCAGCAGC AGCAGCAGCA GGGGCGGAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OOa45106 | |
Clone ID Related Accession (Same CDS sequence) | XM_026021507.1 | |
Accession Version | XM_026021507.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1641bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-08-06 | |
Organism | Oryza sativa Japonica Group(Japanese rice) | |
Product | uncharacterized LOC4349562 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_029266.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Oryza sativa Japonica Group Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGGCGT TGGGCGGTGC TGGTGGCGAC GGTGTGGATA CAGGCGGTGA CGGGGACAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_025877292.1 |
CDS | 402..2042 |
Translation |
Target ORF information:
Target ORF information:
|
XM_026021507.1 |
1 | ATGGCGGCGT TGGGCGGTGC TGGTGGCGAC GGTGTGGATA CAGGCGGTGA CGGGGACAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OOa41597 | |
Clone ID Related Accession (Same CDS sequence) | XM_015760592.1 | |
Accession Version | XM_015760592.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3480bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-02-29 | |
Organism | Oryza sativa Japonica Group(Japanese rice) | |
Product | uncharacterized protein LOC4349562 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_015379184.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Oryza sativa Japonica Group Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 1% of CDS bases ##RefSeq-Attributes-END## |
1 | ATGGAGCGGT CGACGACGAC GACGACGGAG CAGCAGCAGC AGCAGCAGCA GGGGCGGAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015616078.1 |
CDS | 315..3794 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015760592.1 |
1 | ATGGAGCGGT CGACGACGAC GACGACGGAG CAGCAGCAGC AGCAGCAGCA GGGGCGGAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. |