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Arabidopsis thaliana (thale cress)

Browse by Letter Index, Genomic Locus


Senescence-Associated Secretory Phenotype (SASP) Processing of DNA double-strand break ends
Nonhomologous End-Joining (NHEJ) G-protein activation
Deubiquitination rRNA processing in the nucleus and cytosol
HDR through Homologous Recombination (HRR) Global Genome Nucleotide Excision Repair (GG-NER)
DNA Damage Recognition in GG-NER Dual Incision in GG-NER
Signal Transduction MAP2K and MAPK activation
Signaling by Insulin receptor Insulin receptor signalling cascade
PKB-mediated events Insulin receptor recycling
ARMS-mediated activation VEGFR2 mediated vascular permeability
RAF-independent MAPK1/3 activation MAPK3 (ERK1) activation
Signaling by Rho GTPases RHO GTPases Activate NADPH Oxidases
Signaling by GPCR Effects of PIP2 hydrolysis
Visual phototransduction The canonical retinoid cycle in rods (twilight vision)
Signaling by Retinoic Acid Signaling by Leptin
Signaling by Hedgehog Attenuation phase
Eukaryotic Translation Initiation Formation of a pool of free 40S subunits
GTP hydrolysis and joining of the 60S ribosomal subunit Recycling of eIF2:GDP
Peptide chain elongation Synthesis of substrates in N-glycan biosythesis
Synthesis of UDP-N-acetyl-glucosamine N-glycan trimming and elongation in the cis-Golgi
N-glycan antennae elongation in the medial/trans-Golgi Reactions specific to the hybrid N-glycan synthesis pathway
SUMOylation SUMO is conjugated to E1 (UBA2:SAE1)
Unfolded Protein Response (UPR) Release of apoptotic factors from the mitochondria
Regulated Necrosis RIPK1-mediated regulated necrosis
Intra-Golgi and retrograde Golgi-to-ER traffic Retrograde transport at the Trans-Golgi-Network
Golgi-to-ER retrograde transport COPI-dependent Golgi-to-ER retrograde traffic
trans-Golgi Network Vesicle Budding Clathrin derived vesicle budding
Lysosome Vesicle Biogenesis Glycogen breakdown (glycogenolysis)
Fructose biosynthesis Hyaluronan uptake and degradation
Lysosomal oligosaccharide catabolism Triglyceride Biosynthesis
Synthesis of very long-chain fatty acyl-CoAs Beta oxidation of decanoyl-CoA to octanoyl-CoA-CoA
Activation of gene expression by SREBF (SREBP) Bile acid and bile salt metabolism
Glucocorticoid biosynthesis Synthesis of PS
Synthesis of CL Synthesis of PIPs at the Golgi membrane
Synthesis of PIPs at the plasma membrane alpha-linolenic acid (ALA) metabolism
Synthesis of Lipoxins (LX) Synthesis of Hepoxilins (HX) and Trioxilins (TrX)
Glycosphingolipid metabolism Wax biosynthesis
Integration of energy metabolism Acetylcholine regulates insulin secretion
Free fatty acids regulate insulin secretion Fatty Acids bound to GPR40 (FFAR1) regulate insulin secretion
Pyruvate metabolism and Citric Acid (TCA) cycle Respiratory electron transport, ATP synthesis by chemiosmotic coupling, and heat production by uncoupling proteins.
Complex I biogenesis Purine catabolism
Pyrimidine salvage reactions Vitamin B5 (pantothenate) metabolism
Metabolism of folate and pterines Molybdenum cofactor biosynthesis
Carnitine synthesis Metabolism of polyamines
Agmatine biosynthesis Cysteine formation from homocysteine
Heme biosynthesis Biological oxidations
Phase 1 - Functionalization of compounds Endogenous sterols
Vitamins PAOs oxidise polyamines to amines
Cytosolic sulfonation of small molecules Erythrocytes take up oxygen and release carbon dioxide
Platelet activation, signaling and aggregation p53-Dependent G1/S DNA damage checkpoint
Autodegradation of the E3 ubiquitin ligase COP1 Mitotic Spindle Checkpoint
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