ORF » Species Summary » Danio rerio » LOC562542 cDNA ORF clone

LOC562542 cDNA ORF clone, Danio rerio(zebrafish)

The following LOC562542 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC562542 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
ODa18219 NM_001327876.1
Latest version!		 Danio rerio uncharacterized LOC562542 (LOC562542), transcript variant 1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $174.30
$249.00
ODa18220 NM_001327877.1
Latest version!		 Danio rerio uncharacterized LOC562542 (LOC562542), transcript variant 2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $174.30
$249.00
ODa18221 NM_001327878.1
Latest version!		 Danio rerio uncharacterized LOC562542 (LOC562542), transcript variant 3, mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $174.30
$249.00
ODa148207 XM_021480124.1
Latest version!		 Danio rerio uncharacterized LOC562542 (LOC562542), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $174.30
$249.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC562542 ( NM_001327876.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001314805.1 Danio rerio uncharacterized LOC562542 (LOC562542), transcript variant 1, mRNA.
    Price & Availability↑
    CloneID ODa18219
    Clone ID Related Accession (Same CDS sequence) NM_001327876.1
    Accession Version NM_001327876.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 630bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2017-09-06
    Organism Danio rerio(zebrafish)
    Product uncharacterized protein LOC562542 isoform 1 precursor
    Comment Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CABZ01068358.1. On May 27, 2016 this sequence version replaced XM_005169495.2. Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1). Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: EB990321.1, DR718699.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350] ##Evidence-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    ATGAATGCTG TAAATGCAGT GCAACTGTTC CTACTGGTTT GGAGCTTTTC TACTGTGTGC 
    CATGGAGATA CGGGTGTCTG CAGTGTGAGC TGTGATGATG TGACTGGAAC TGTGGGAAAT 
    GAAGTGACTC TCACCTGCAG AGTCTCTGAA AAGTGCAAAG AAGACTGCAT TAAAATGTTT 
    AAGTTTCTGT ATCCTGAGAA CTATAAAAAC TCAGAAATCT GTAGACAAAA GTCTCCTGGC 
    GGATCCTGTG AAAAGGAGAA CATCTTCACA TGCAGATACA CTCCAGATGC AGCAATAAAT 
    GAAACAATCC GATTCTTTAT GCAAACCAGG TCTTCACCAG TAAAAGGGAA ATTCACAGTG 
    GAGATATCAG GTACTGCATC AGGTCTTATG AAATCAACAG CTGATACTGA AGCTCTCATC 
    AATGAAGAAG CGCACAAATA CATGGGCACA TCAGAAACCC GTAAAGAAGA AAAACAAGAT 
    CGTGGATTTC AGCTTGCTGT TATTCTCGCG GTGGTGAGCT GCTTCATCAT CATCATCATC 
    GTTGTTATTT TCAAAGTGAA GAAAAGTGAA AGCACACGTC CAAGACTCGG ACAAAAGGAA 
    AACAGCGACA CACTTCTACA CAATGTTTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq NP_001314805.1
    CDS249..878
    Translation

    Target ORF information:

    RefSeq Version NM_001327876.1
    Organism Danio rerio(zebrafish)
    Definition Danio rerio uncharacterized LOC562542 (LOC562542), transcript variant 1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 NM_001327876.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    ATGAATGCTG TAAATGCAGT GCAACTGTTC CTACTGGTTT GGAGCTTTTC TACTGTGTGC 
    CATGGAGATA CGGGTGTCTG CAGTGTGAGC TGTGATGATG TGACTGGAAC TGTGGGAAAT 
    GAAGTGACTC TCACCTGCAG AGTCTCTGAA AAGTGCAAAG AAGACTGCAT TAAAATGTTT 
    AAGTTTCTGT ATCCTGAGAA CTATAAAAAC TCAGAAATCT GTAGACAAAA GTCTCCTGGC 
    GGATCCTGTG AAAAGGAGAA CATCTTCACA TGCAGATACA CTCCAGATGC AGCAATAAAT 
    GAAACAATCC GATTCTTTAT GCAAACCAGG TCTTCACCAG TAAAAGGGAA ATTCACAGTG 
    GAGATATCAG GTACTGCATC AGGTCTTATG AAATCAACAG CTGATACTGA AGCTCTCATC 
    AATGAAGAAG CGCACAAATA CATGGGCACA TCAGAAACCC GTAAAGAAGA AAAACAAGAT 
    CGTGGATTTC AGCTTGCTGT TATTCTCGCG GTGGTGAGCT GCTTCATCAT CATCATCATC 
    GTTGTTATTT TCAAAGTGAA GAAAAGTGAA AGCACACGTC CAAGACTCGG ACAAAAGGAA 
    AACAGCGACA CACTTCTACA CAATGTTTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC562542 ( NM_001327877.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001314806.1 Danio rerio uncharacterized LOC562542 (LOC562542), transcript variant 2, mRNA.
    Price & Availability↑
    CloneID ODa18220
    Clone ID Related Accession (Same CDS sequence) NM_001327877.1
    Accession Version NM_001327877.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 621bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2017-09-06
    Organism Danio rerio(zebrafish)
    Product uncharacterized protein LOC562542 isoform 2 precursor
    Comment Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CABZ01068358.1 and EH435870.1. On May 27, 2016 this sequence version replaced XM_005169496.2. Transcript Variant: This variant (2) uses an alternate in-frame splice site in the 3' coding region compared to variant 1. The encoded isoform (2) is shorter than isoform 1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: GDQH01000679.1, EH437304.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350] ##Evidence-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    ATGAATGCTG TAAATGCAGT GCAACTGTTC CTACTGGTTT GGAGCTTTTC TACTGTGTGC 
    CATGGAGATA CGGGTGTCTG CAGTGTGAGC TGTGATGATG TGACTGGAAC TGTGGGAAAT 
    GAAGTGACTC TCACCTGCAG AGTCTCTGAA AAGTGCAAAG AAGACTGCAT TAAAATGTTT 
    AAGTTTCTGT ATCCTGAGAA CTATAAAAAC TCAGAAATCT GTAGACAAAA GTCTCCTGGC 
    GGATCCTGTG AAAAGGAGAA CATCTTCACA TGCAGATACA CTCCAGATGC AGCAATAAAT 
    GAAACAATCC GATTCTTTAT GCAAACCAGG TCTTCACCAG TAAAAGGGAA ATTCACAGTG 
    GAGATATCAG CAGGTCTTAT GAAATCAACA GCTGATACTG AAGCTCTCAT CAATGAAGAA 
    GCGCACAAAT ACATGGGCAC ATCAGAAACC CGTAAAGAAG AAAAACAAGA TCGTGGATTT 
    CAGCTTGCTG TTATTCTCGC GGTGGTGAGC TGCTTCATCA TCATCATCAT CGTTGTTATT 
    TTCAAAGTGA AGAAAAGTGA AAGCACACGT CCAAGACTCG GACAAAAGGA AAACAGCGAC 
    ACACTTCTAC ACAATGTTTA A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq NP_001314806.1
    CDS249..869
    Translation

    Target ORF information:

    RefSeq Version NM_001327877.1
    Organism Danio rerio(zebrafish)
    Definition Danio rerio uncharacterized LOC562542 (LOC562542), transcript variant 2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 NM_001327877.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    ATGAATGCTG TAAATGCAGT GCAACTGTTC CTACTGGTTT GGAGCTTTTC TACTGTGTGC 
    CATGGAGATA CGGGTGTCTG CAGTGTGAGC TGTGATGATG TGACTGGAAC TGTGGGAAAT 
    GAAGTGACTC TCACCTGCAG AGTCTCTGAA AAGTGCAAAG AAGACTGCAT TAAAATGTTT 
    AAGTTTCTGT ATCCTGAGAA CTATAAAAAC TCAGAAATCT GTAGACAAAA GTCTCCTGGC 
    GGATCCTGTG AAAAGGAGAA CATCTTCACA TGCAGATACA CTCCAGATGC AGCAATAAAT 
    GAAACAATCC GATTCTTTAT GCAAACCAGG TCTTCACCAG TAAAAGGGAA ATTCACAGTG 
    GAGATATCAG CAGGTCTTAT GAAATCAACA GCTGATACTG AAGCTCTCAT CAATGAAGAA 
    GCGCACAAAT ACATGGGCAC ATCAGAAACC CGTAAAGAAG AAAAACAAGA TCGTGGATTT 
    CAGCTTGCTG TTATTCTCGC GGTGGTGAGC TGCTTCATCA TCATCATCAT CGTTGTTATT 
    TTCAAAGTGA AGAAAAGTGA AAGCACACGT CCAAGACTCG GACAAAAGGA AAACAGCGAC 
    ACACTTCTAC ACAATGTTTA A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC562542 ( NM_001327878.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001314807.1 Danio rerio uncharacterized LOC562542 (LOC562542), transcript variant 3, mRNA.
    Price & Availability↑
    CloneID ODa18221
    Clone ID Related Accession (Same CDS sequence) NM_001327878.1
    Accession Version NM_001327878.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 618bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2017-09-06
    Organism Danio rerio(zebrafish)
    Product uncharacterized protein LOC562542 isoform 3 precursor
    Comment Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CABZ01068358.1. On May 27, 2016 this sequence version replaced XM_701036.7. Transcript Variant: This variant (3) uses an alternate in-frame splice site in the 3' coding region compared to variant 1. The encoded isoform (3) is shorter than isoform 1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: DT054459.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350] ##Evidence-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    ATGAATGCTG TAAATGCAGT GCAACTGTTC CTACTGGTTT GGAGCTTTTC TACTGTGTGC 
    CATGGAGATA CGGGTGTCTG CAGTGTGAGC TGTGATGATG TGACTGGAAC TGTGGGAAAT 
    GAAGTGACTC TCACCTGCAG AGTCTCTGAA AAGTGCAAAG AAGACTGCAT TAAAATGTTT 
    AAGTTTCTGT ATCCTGAGAA CTATAAAAAC TCAGAAATCT GTAGACAAAA GTCTCCTGGC 
    GGATCCTGTG AAAAGGAGAA CATCTTCACA TGCAGATACA CTCCAGATGC AGCAATAAAT 
    GAAACAATCC GATTCTTTAT GCAAACCAGG TCTTCACCAG TAAAAGGGAA ATTCACAGTG 
    GAGATATCAG GTCTTATGAA ATCAACAGCT GATACTGAAG CTCTCATCAA TGAAGAAGCG 
    CACAAATACA TGGGCACATC AGAAACCCGT AAAGAAGAAA AACAAGATCG TGGATTTCAG 
    CTTGCTGTTA TTCTCGCGGT GGTGAGCTGC TTCATCATCA TCATCATCGT TGTTATTTTC 
    AAAGTGAAGA AAAGTGAAAG CACACGTCCA AGACTCGGAC AAAAGGAAAA CAGCGACACA 
    CTTCTACACA ATGTTTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq NP_001314807.1
    CDS249..866
    Translation

    Target ORF information:

    RefSeq Version NM_001327878.1
    Organism Danio rerio(zebrafish)
    Definition Danio rerio uncharacterized LOC562542 (LOC562542), transcript variant 3, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 NM_001327878.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    ATGAATGCTG TAAATGCAGT GCAACTGTTC CTACTGGTTT GGAGCTTTTC TACTGTGTGC 
    CATGGAGATA CGGGTGTCTG CAGTGTGAGC TGTGATGATG TGACTGGAAC TGTGGGAAAT 
    GAAGTGACTC TCACCTGCAG AGTCTCTGAA AAGTGCAAAG AAGACTGCAT TAAAATGTTT 
    AAGTTTCTGT ATCCTGAGAA CTATAAAAAC TCAGAAATCT GTAGACAAAA GTCTCCTGGC 
    GGATCCTGTG AAAAGGAGAA CATCTTCACA TGCAGATACA CTCCAGATGC AGCAATAAAT 
    GAAACAATCC GATTCTTTAT GCAAACCAGG TCTTCACCAG TAAAAGGGAA ATTCACAGTG 
    GAGATATCAG GTCTTATGAA ATCAACAGCT GATACTGAAG CTCTCATCAA TGAAGAAGCG 
    CACAAATACA TGGGCACATC AGAAACCCGT AAAGAAGAAA AACAAGATCG TGGATTTCAG 
    CTTGCTGTTA TTCTCGCGGT GGTGAGCTGC TTCATCATCA TCATCATCGT TGTTATTTTC 
    AAAGTGAAGA AAAGTGAAAG CACACGTCCA AGACTCGGAC AAAAGGAAAA CAGCGACACA 
    CTTCTACACA ATGTTTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC562542 ( XM_021480124.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_021335799.1 Danio rerio uncharacterized LOC562542 (LOC562542), transcript variant X1, mRNA.
    Price & Availability↑
    CloneID ODa148207
    Clone ID Related Accession (Same CDS sequence) XM_021480124.1
    Accession Version XM_021480124.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 627bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2017-06-14
    Organism Danio rerio(zebrafish)
    Product uncharacterized protein LOC562542 isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007123.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    ATGAATGCTG TAAATGCAGT GCAACTGTTC CTACTGGTTT GGAGCTTTTC TACTGTGTGC 
    CATGGAGATA CGGGTGTCTG CAGTGTGAGC TGTGATGATG TGACTGGAAC TGTGGGAAAT 
    GAAGTGACTC TCACCTGCAG AGTCTCTGAA AAGTGCAAAG AAGACTGCAT TAAAATGTTT 
    AAGTTTCTGT ATCCTGAGAA CTATAAAAAC TCAGAAATCT GTAGACAAAA GTCTCCTGGC 
    GGATCCTGTG AAAAGGAGAA CATCTTCACA TGCAGATACA CTCCAGATGC AGCAATAAAT 
    GAAACAATCC GATTCTTTAT GCAAACCAGG TCTTCACCAG TAAAAGGGAA ATTCACAGTG 
    GAGATATCAG GTACTGCATG TCTTATGAAA TCAACAGCTG ATACTGAAGC TCTCATCAAT 
    GAAGAAGCGC ACAAATACAT GGGCACATCA GAAACCCGTA AAGAAGAAAA ACAAGATCGT 
    GGATTTCAGC TTGCTGTTAT TCTCGCGGTG GTGAGCTGCT TCATCATCAT CATCATCGTT 
    GTTATTTTCA AAGTGAAGAA AAGTGAAAGC ACACGTCCAA GACTCGGACA AAAGGAAAAC 
    AGCGACACAC TTCTACACAA TGTTTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_021335799.1
    CDS348..974
    Translation

    Target ORF information:

    RefSeq Version XM_021480124.1
    Organism Danio rerio(zebrafish)
    Definition Danio rerio uncharacterized LOC562542 (LOC562542), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_021480124.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    ATGAATGCTG TAAATGCAGT GCAACTGTTC CTACTGGTTT GGAGCTTTTC TACTGTGTGC 
    CATGGAGATA CGGGTGTCTG CAGTGTGAGC TGTGATGATG TGACTGGAAC TGTGGGAAAT 
    GAAGTGACTC TCACCTGCAG AGTCTCTGAA AAGTGCAAAG AAGACTGCAT TAAAATGTTT 
    AAGTTTCTGT ATCCTGAGAA CTATAAAAAC TCAGAAATCT GTAGACAAAA GTCTCCTGGC 
    GGATCCTGTG AAAAGGAGAA CATCTTCACA TGCAGATACA CTCCAGATGC AGCAATAAAT 
    GAAACAATCC GATTCTTTAT GCAAACCAGG TCTTCACCAG TAAAAGGGAA ATTCACAGTG 
    GAGATATCAG GTACTGCATG TCTTATGAAA TCAACAGCTG ATACTGAAGC TCTCATCAAT 
    GAAGAAGCGC ACAAATACAT GGGCACATCA GAAACCCGTA AAGAAGAAAA ACAAGATCGT 
    GGATTTCAGC TTGCTGTTAT TCTCGCGGTG GTGAGCTGCT TCATCATCAT CATCATCGTT 
    GTTATTTTCA AAGTGAAGAA AAGTGAAAGC ACACGTCCAA GACTCGGACA AAAGGAAAAC 
    AGCGACACAC TTCTACACAA TGTTTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

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