Gene Symbol | PAT1 |
Entrez Gene ID | 834867 |
Full Name | GRAS family transcription factor |
Synonyms | MIF21.4,MIF21_4,phytochrome a signal transduction 1 |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
ORF » Species Summary » Arabidopsis thaliana » PAT1 cDNA ORF clone
Gene Symbol | PAT1 |
Entrez Gene ID | 834867 |
Full Name | GRAS family transcription factor |
Synonyms | MIF21.4,MIF21_4,phytochrome a signal transduction 1 |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
mRNA | Protein | Name |
---|---|---|
NM_001344761.1 | NP_001332482.1 | GRAS family transcription factor |
NM_124189.6 | NP_199626.1 | GRAS family transcription factor |
NM_203174.3 | NP_974903.1 | GRAS family transcription factor |
NM_001344762.1 | NP_001332483.1 | GRAS family transcription factor |
Oryza sativa (rice) | Os03g0193000 | NP_001049245.1 |
Arabidopsis thaliana (thale cress) | SCL21 | NP_178566.1 |
Arabidopsis thaliana (thale cress) | PAT1 | NP_974903.1 |
Arabidopsis thaliana (thale cress) | SCL5 | NP_175475.2 |
Oryza sativa (rice) | Os07g0583600 | NP_001060115.1 |
Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.
Tabata S, Kaneko T, Nakamura Y, Kotani H, Kato T, Asamizu E, Miyajima N, Sasamoto S, Kimura T, Hosouchi T, Kawashima K, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Naruo K, Okumura S, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Sato S, de la Bastide M, Huang E, Spiegel L, Gnoj L, O'Shaughnessy A, Preston R, Habermann K, Murray J, Johnson D, Rohlfing T, Nelson J, Stoneking T, Pepin K, Spieth J, Sekhon M, Armstrong J, Becker M, Belter E, Cordum H, Cordes M, Courtney L, Courtney W, Dante M, Du H, Edwards J, Fryman J, Haakensen B, Lamar E, Latreille P, Leonard S, Meyer R, Mulvaney E, Ozersky P, Riley A, Strowmatt C, Wagner-McPherson C, Wollam A, Yoakum M, Bell M, Dedhia N, Parnell L, Shah R, Rodriguez M, See LH, Vil D, Baker J, Kirchoff K, Toth K, King L, Bahret A, Miller B, Marra M, Martienssen R, McCombie WR, Wilson RK, Murphy G, Bancroft I, Volckaert G, Wambutt R, D?sterh?ft A, Stiekema W, Pohl T, Entian KD, Terryn N, Hartley N, Bent E, Johnson S, Langham SA, McCullagh B, Robben J, Grymonprez B, Zimmermann W, Ramsperger U, Wedler H, Balke K, Wedler E, Peters S, van Staveren M, Dirkse W, Mooijman P, Lankhorst RK, Weitzenegger T, Bothe G, Rose M, Hauf J, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Villarroel R, Gielen J, Ardiles W, Bents O, Lemcke K, Kolesov G, Mayer K, Rudd S, Schoof H, Schueller C, Zaccaria P, Mewes HW, Bevan M, Fransz P, , ,
Nature408(6814)823-6(2000 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The mRNA decay factor PAT1 functions in a pathway including MAP kinase 4 and immune receptor SUMM2.
Title: The mRNA decay factor PAT1 functions in a pathway including MAP kinase 4 and immune receptor SUMM2.
Both PAT1 and SCL21 are involved in phyA-dependent signaling.
Title: Two GRAS proteins, SCARECROW-LIKE21 and PHYTOCHROME A SIGNAL TRANSDUCTION1, function cooperatively in phytochrome A signal transduction.
The following PAT1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the PAT1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OAb20897 | |
Clone ID Related Accession (Same CDS sequence) | NM_001344761.1 , NM_124189.6 , NM_203174.3 , NM_001344762.1 | |
Accession Version | NM_001344761.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1473bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | GRAS family transcription factor | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003076). |
1 | ATGTACAAGC AGCCTAGACA AGAGCTTGAG GCTTATTATT TTGAGCCTAA CTCTGTTGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001332482.1 |
CDS | 386..1858 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001344761.1 |
1 | ATGTACAAGC AGCCTAGACA AGAGCTTGAG GCTTATTATT TTGAGCCTAA CTCTGTTGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb20897 | |
Clone ID Related Accession (Same CDS sequence) | NM_001344761.1 , NM_124189.6 , NM_203174.3 , NM_001344762.1 | |
Accession Version | NM_124189.6 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1473bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | GRAS family transcription factor | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003076). On Sep 12, 2016 this sequence version replaced NM_124189.5. |
1 | ATGTACAAGC AGCCTAGACA AGAGCTTGAG GCTTATTATT TTGAGCCTAA CTCTGTTGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_199626.1 |
CDS | 317..1789 |
Translation |
Target ORF information:
Target ORF information:
|
NM_124189.6 |
1 | ATGTACAAGC AGCCTAGACA AGAGCTTGAG GCTTATTATT TTGAGCCTAA CTCTGTTGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb20897 | |
Clone ID Related Accession (Same CDS sequence) | NM_001344761.1 , NM_124189.6 , NM_203174.3 , NM_001344762.1 | |
Accession Version | NM_203174.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1473bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | GRAS family transcription factor | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003076). On Sep 12, 2016 this sequence version replaced NM_203174.2. |
1 | ATGTACAAGC AGCCTAGACA AGAGCTTGAG GCTTATTATT TTGAGCCTAA CTCTGTTGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_974903.1 |
CDS | 397..1869 |
Translation |
Target ORF information:
Target ORF information:
|
NM_203174.3 |
1 | ATGTACAAGC AGCCTAGACA AGAGCTTGAG GCTTATTATT TTGAGCCTAA CTCTGTTGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb20897 | |
Clone ID Related Accession (Same CDS sequence) | NM_001344761.1 , NM_124189.6 , NM_203174.3 , NM_001344762.1 | |
Accession Version | NM_001344762.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1473bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | GRAS family transcription factor | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003076). |
1 | ATGTACAAGC AGCCTAGACA AGAGCTTGAG GCTTATTATT TTGAGCCTAA CTCTGTTGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001332483.1 |
CDS | 421..1893 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001344762.1 |
1 | ATGTACAAGC AGCCTAGACA AGAGCTTGAG GCTTATTATT TTGAGCCTAA CTCTGTTGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. |